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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAG mRNA sequence ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAG Coding sequence (CDS) ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAG Protein sequence MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNKTPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFX
Homology
BLAST of CsaV3_3G022740 vs. NCBI nr
Match: KAE8650678.1 (hypothetical protein Csa_010607, partial [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 4.0e-53 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query: 1 MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK
Sbjct: 1 MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
Query: 61 TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF 110
TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF
Sbjct: 61 TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF 109
BLAST of CsaV3_3G022740 vs. NCBI nr
Match: KAG7015226.1 (hypothetical protein SDJN02_22859, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-10 Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 20 SFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNKTPLPFISIFSNINPS 76
SFPHRVVGE RRQVLS R +P+YNNDL +VTV S +NNKTP PFI FS +PS
Sbjct: 3 SFPHRVVGEAIRRQVLSQHRQTPQYNNDLPAVTVKSHKNNKTPPPFIVPFSTSSPS 58
BLAST of CsaV3_3G022740 vs. ExPASy TrEMBL
Match: A0A0A0LBC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G405520 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query: 1 MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK
Sbjct: 1 MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
Query: 61 TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF 110
TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF
Sbjct: 61 TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNF 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAE8650678.1 | 4.0e-53 | 100.00 | hypothetical protein Csa_010607, partial [Cucumis sativus] | [more] |
| KAG7015226.1 | 1.9e-10 | 67.86 | hypothetical protein SDJN02_22859, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LBC3 | 2.0e-53 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G405520 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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