
CsaV3_3G022640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGATGTATATAATATTATGATTTTTAAGAAAGAAAAATTCCTCAAACATGGGGGAATCCGTAATCAAAGATACCTCAGAAGGGGAGAAGCGTAATTTGACATCTACCCAAACTCACCTCATTCTCATTCTTCCTCTAAACAGTCCTTTTCTCTCTATCTCTCTCCTCTCAGTTGTCACTTTTTTCTTTCTGGCTCACAAAAACCACACTCTTAAACCTCATTCTCTCTGTGTCTGTGTAATTCAGCCATGGGTACCCTGTTTGGGAGAATTCAGATCTCAATACTCATCATCTTGTTAATGGGTCTATGCAGCAATTGTGTTGAAGATTCTTCTTCCATTCATTCTCTTTTGCGATCGATGGGGCCACCGGCAGGGCTTGTTCCCAAGCAAGCCAAATCTTACACACTCGCTGAAAATGGTCGTTTGGAAGTGTATTTAGATGCTCCGTGTATGGCTAAATATGAGAATAGAGTGATTTTCGACACTGTTTTTAGTGCTAATCTTAGCTATGGAAGCTTGATTGGTGTGGAGGGTATGTCTCAAGAAGAGCTTTTTCTGTGGCTACCTGTTAAAGATATCATTGTTAATTACCCTACTTCTGGTGTTATTCTTATTGACATTGGTGTTGCTCATAAACAACTCTCTTTGTCTCTCTTTGAAGATCCTCCTGACTGTAACCCTCAAGGTGAACTTTTTCATTTTCCTTCTCTCCATTTTTTTTTAACATTAATGTCTTCTGGCTTGTTCTTCTTTTTCTTTATTTCTATCAATGGTTGTTTCTTTTCCTCAATTGATGGATTTTTCCTTTTATTGATGGATTTTTCCTTTTGCCACTCTTTTTTTTTTTCTCCTTTCGTTCTCTTTCAATTGATGGGGTTTCCTCTCTTCTCTCATCAATGTCTTCTTTTAGCTCTGTTTTTGCCTTTGATTCTCTTTAAATTGATGGGATTTCTTTGTCTTCTCTCATCGATGGCTTCCAGTGGCTCTGTTTTTCCCTTGGCTACTTCTTTACTTCCTCTCTGTTTCACTCTAAATTGATGAATGATTAATGGGTTCCTCTGGCTCTCTGTTTCCATCTGTTTTTGGCCTCTGCACACTTCTTCTTCTATCTCTAAATGGATGGGTTCTCTCTATCTTCCATCATTTTTCTTATAATTAATGGCTTTTTTTTTGTTCTTCTTCTTTTAATTTCATTCCACTGTCTCTAAGATAGCTTCACAATCACAATGAACAGTTATGTTTGTTTGCCTTCCTCTCTCTGAATTAATTGCTTTCTTCTTATCTTTCATTCAATTAATGTCTTGTTTTCCCAACCAACCCATACCTTTTGCTTTCCCTTTTTCTTCTTCTTCTGTGGATCCATTTCTCACCTTCTTCCATTTTCACCATTAATGGCTTCTTCTTCTTCTTACCTCTCTAAATCATATTTGGTGAATCCCATTAATTTGTACTTCCAAAACAAACAATGAAGGGAAAAGTCATAGACAACAAAACATGGGGAACTTGCAACTTCAAATTCATTATTTTAGACACAGTAATAGAGATTTGTTTTTTGTTCTGTAATTAATGGTTGGGTTTTCTTTGTGTTTGTTTTTGCAGTTACATTGAGGAATCCTTTGAGGAGGCAAAGAGGCTTTGAATCTCTAAGATGAAAGGGCAAACAACACATAAATATATATATATATATATATGTCAAATTCAAGTTTCCAACTTTTGTATTTATATCATTTTATTGTAATAATTTCATTTTTTTTCGAAAAAAAAAAACAGAAACCAATTGTCACACTTTAGTATATAATGAGAGCTTGTGTGGTGAAATTTTGGAATTAAGTTTCATTTCCAATTGTCACACTGGATGGTTCTTGTGTGATTTGTTTATAATTTAATTTGTGCGTTTGAAGAAAATGGTTTAAAATGAGTTTAAACCCTAACATTGTTAATGTGTTTCTTTCATCCTTAACTTTTAAAGTGATTGTTTTAATCCTGATTTGAT ATGGGTACCCTGTTTGGGAGAATTCAGATCTCAATACTCATCATCTTGTTAATGGGTCTATGCAGCAATTGTGTTGAAGATTCTTCTTCCATTCATTCTCTTTTGCGATCGATGGGGCCACCGGCAGGGCTTGTTCCCAAGCAAGCCAAATCTTACACACTCGCTGAAAATGGTCGTTTGGAAGTGTATTTAGATGCTCCGTGTATGGCTAAATATGAGAATAGAGTGATTTTCGACACTGTTTTTAGTGCTAATCTTAGCTATGGAAGCTTGATTGGTGTGGAGGGTATGTCTCAAGAAGAGCTTTTTCTGTGGCTACCTGTTAAAGATATCATTGTTAATTACCCTACTTCTGGTGTTATTCTTATTGACATTGGTGTTGCTCATAAACAACTCTCTTTGTCTCTCTTTGAAGATCCTCCTGACTGTAACCCTCAAGTTACATTGAGGAATCCTTTGAGGAGGCAAAGAGGCTTTGAATCTCTAAGATGA ATGGGTACCCTGTTTGGGAGAATTCAGATCTCAATACTCATCATCTTGTTAATGGGTCTATGCAGCAATTGTGTTGAAGATTCTTCTTCCATTCATTCTCTTTTGCGATCGATGGGGCCACCGGCAGGGCTTGTTCCCAAGCAAGCCAAATCTTACACACTCGCTGAAAATGGTCGTTTGGAAGTGTATTTAGATGCTCCGTGTATGGCTAAATATGAGAATAGAGTGATTTTCGACACTGTTTTTAGTGCTAATCTTAGCTATGGAAGCTTGATTGGTGTGGAGGGTATGTCTCAAGAAGAGCTTTTTCTGTGGCTACCTGTTAAAGATATCATTGTTAATTACCCTACTTCTGGTGTTATTCTTATTGACATTGGTGTTGCTCATAAACAACTCTCTTTGTCTCTCTTTGAAGATCCTCCTGACTGTAACCCTCAAGTTACATTGAGGAATCCTTTGAGGAGGCAAAGAGGCTTTGAATCTCTAAGATGA MGTLFGRIQISILIILLMGLCSNCVEDSSSIHSLLRSMGPPAGLVPKQAKSYTLAENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQVTLRNPLRRQRGFESLR* Homology
BLAST of CsaV3_3G022640 vs. NCBI nr
Match: XP_004151974.1 (uncharacterized protein LOC101218420 [Cucumis sativus] >KGN57940.1 hypothetical protein Csa_010086 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 5.4e-86 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. NCBI nr
Match: XP_008454610.1 (PREDICTED: uncharacterized protein LOC103494976 [Cucumis melo]) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. NCBI nr
Match: XP_038900271.1 (uncharacterized protein LOC120087352 [Benincasa hispida]) HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76 Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. NCBI nr
Match: XP_022976596.1 (uncharacterized protein LOC111476944 [Cucurbita maxima] >KAG6592007.1 hypothetical protein SDJN03_14353, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024881.1 hypothetical protein SDJN02_13701, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.4 bits (677), Expect = 3.3e-67 Identity = 139/172 (80.81%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. NCBI nr
Match: XP_022937405.1 (uncharacterized protein LOC111443705 [Cucurbita moschata]) HSP 1 Score: 264.2 bits (674), Expect = 7.3e-67 Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. ExPASy TrEMBL
Match: A0A0A0L7K3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399960 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.6e-86 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. ExPASy TrEMBL
Match: A0A1S3BZT2 (uncharacterized protein LOC103494976 OS=Cucumis melo OX=3656 GN=LOC103494976 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. ExPASy TrEMBL
Match: A0A6J1IHB3 (uncharacterized protein LOC111476944 OS=Cucurbita maxima OX=3661 GN=LOC111476944 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67 Identity = 139/172 (80.81%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. ExPASy TrEMBL
Match: A0A6J1FGJ2 (uncharacterized protein LOC111443705 OS=Cucurbita moschata OX=3662 GN=LOC111443705 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 3.5e-67 Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. ExPASy TrEMBL
Match: A0A6J1CC85 (uncharacterized protein LOC111010343 OS=Momordica charantia OX=3673 GN=LOC111010343 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.1e-66 Identity = 129/155 (83.23%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 176.0 bits (445), Expect = 2.4e-44 Identity = 91/155 (58.71%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38 Identity = 79/149 (53.02%), Postives = 104/149 (69.80%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 ) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of CsaV3_3G022640 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25 Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|