CsaV3_3G019810 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G019810
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 15615464 .. 15616701 (-)
RNA-Seq ExpressionCsaV3_3G019810
SyntenyCsaV3_3G019810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTACAGCGCAGTTCAAGTGGGTCACATGAACGACTCAATAATTTATTCTTTAGTACGCTTCAGAGGCCTTCAATTCCATAAGAATCTGTGACCCAATTATAATTTTTCCCTCTTTCGCTTCCATTTTTTCATCTCTGCAAAATTCATGATGAGGTTGCTTTGAAATCAATCAAAGAGTGGGTTGCTATCGGACCCATTTCAAATCCCGCATTGCCTTGTTTCGGAATTCGAGGCCCGATCTTCGAACTTTTTGGATTATAAAATGCTCGTGGTAACTGGGATTCTTGGGGAGTTTTCGTTTTAAAAGTCTACTTCTGATTTTATCAATTTCTGTGCTTTCTTATGCTGGTTTTTGCTTTACAGGTCGAACTCAAGGAAGAAGAAACTCAAACAGTCAATTTCTTCTGGACCCACCAAGGGATTCTTGACTGAGTTGCTTCATTATTTTGTCTATGAACTGAAAATGATACAATTTATTGCTCTATATGAACAAGAAGATGCTCCAACCTCTCAAAGGTATTTGATGATATCATGGAGAAAGAGGAGTTATTTTTTTCAATGGTTTTTAGTTACGAATTAGGAAATGGGTTTTGGTGGGTATCTTTGATTTGGGTTTTGTTATTGTTTATTGCTGCCATTGTGCATTGCTAGCAACCCTTTTGTTTTCTGCTTCAAAAGGTAAGAAGTTAAAAGACATAATCATCTTGTGAGAACTGAAAGTAAGTTGGAGATGCAGCCTTTTGGAATAGTTCTCTCATTATGCCTTGAAAAGGAACAATATATGGTGTAGTTCTATGCTGGCTGGCAGACCACTGTGGAAAAGAATAGTATTATAGAGTACTTCTTTTATGCATAAAAGTTGCCTTTTCTCTCTTCAGTGTTTACATGTAGTTGTCACTAAGAGCCAGAAAACCTTGTGTTTGCTTTATCAATGGGTCATGACTTGTGATAGAGAAAATTGGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAGGCAAGTGGGGTTGATTGCACTCTGTCCTTTCCCTGAAAACCAGGGACAATTCTCTCTTTTGTTCTTTTTCTTTTTTTCCTTTTTATGACTTGTATTTTGTTTTAGTTTGGCTTCTTACATGTTCTTCAGACTCAAGCACATGTAAAAGCAGCTATGGTTTTGGAATTTCATGGTCTTGTTGATAAGCTTATAGCCTTCATCCATCTTGCATATTACAATTCTACGATTTTGTGA

mRNA sequence

ATGTCAGTACAGCGCAGTTCAAGTGGGTCACATGAACGACTCAATAATTTATTCTTTAGTTGCTTTGAAATCAATCAAAGAGTGGGTTGCTATCGGACCCATTTCAAATCCCGCATTGCCTTGTTTCGGAATTCGAGGCCCGATCTTCGAACTTTTTGGATTATAAAATGCTCGTGGTCGAACTCAAGGAAGAAGAAACTCAAACAGTCAATTTCTTCTGGACCCACCAAGGGATTCTTGACTGAGTTGCTTCATTATTTTGTCTATGAACTGAAAATGATACAATTTATTGCTCTATATGAACAAGAAGATGCTCCAACCTCTCAAAGGAAATGGGTTTTGGTGGGTATCTTTGATTTGGGTTTTGTTATTGTTTATTGCTGCCATTGTGCATTGCTAGCAACCCTTTTGTTTTCTGCTTCAAAAGAGAAAATTGGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAGGCAAACTCAAGCACATGTAAAAGCAGCTATGGTTTTGGAATTTCATGGTCTTGTTGATAAGCTTATAGCCTTCATCCATCTTGCATATTACAATTCTACGATTTTGTGA

Coding sequence (CDS)

ATGTCAGTACAGCGCAGTTCAAGTGGGTCACATGAACGACTCAATAATTTATTCTTTAGTTGCTTTGAAATCAATCAAAGAGTGGGTTGCTATCGGACCCATTTCAAATCCCGCATTGCCTTGTTTCGGAATTCGAGGCCCGATCTTCGAACTTTTTGGATTATAAAATGCTCGTGGTCGAACTCAAGGAAGAAGAAACTCAAACAGTCAATTTCTTCTGGACCCACCAAGGGATTCTTGACTGAGTTGCTTCATTATTTTGTCTATGAACTGAAAATGATACAATTTATTGCTCTATATGAACAAGAAGATGCTCCAACCTCTCAAAGGAAATGGGTTTTGGTGGGTATCTTTGATTTGGGTTTTGTTATTGTTTATTGCTGCCATTGTGCATTGCTAGCAACCCTTTTGTTTTCTGCTTCAAAAGAGAAAATTGGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAGGCAAACTCAAGCACATGTAAAAGCAGCTATGGTTTTGGAATTTCATGGTCTTGTTGATAAGCTTATAGCCTTCATCCATCTTGCATATTACAATTCTACGATTTTGTGA

Protein sequence

MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTIL*
Homology
[Close]
BLAST of CsaV3_3G019810 vs. NCBI nr
Match: KGN57663.1 (hypothetical protein Csa_011496 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS 60
           MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS
Sbjct: 1   MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS 60

Query: 61  NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL 120
           NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL
Sbjct: 61  NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL 120

Query: 121 GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI 180
           GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI
Sbjct: 121 GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI 180

Query: 181 AFIHLAYYNSTIL 194
           AFIHLAYYNSTIL
Sbjct: 181 AFIHLAYYNSTIL 193

[Close]
BLAST of CsaV3_3G019810 vs. ExPASy TrEMBL
Match: A0A0A0L7A5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239270 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.0e-106
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 

Query: 1   MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS 60
           MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS
Sbjct: 1   MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWS 60

Query: 61  NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL 120
           NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL
Sbjct: 61  NSRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQRKWVLVGIFDL 120

Query: 121 GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI 180
           GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI
Sbjct: 121 GFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQTQAHVKAAMVLEFHGLVDKLI 180

Query: 181 AFIHLAYYNSTIL 194
           AFIHLAYYNSTIL
Sbjct: 181 AFIHLAYYNSTIL 193

The following BLAST results are available for this feature:
BLAST of CsaV3_3G019810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57663.11.2e-105100.00hypothetical protein Csa_011496 [Cucumis sativus][more]
BLAST of CsaV3_3G019810 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G019810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7A56.0e-106100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239270 PE=4 SV=1[more]
BLAST of CsaV3_3G019810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019810.1CsaV3_3G019810.1mRNA