CsaV3_3G016740 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G016740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr3: 12540673 .. 12541514 (+)
RNA-Seq Expression	CsaV3_3G016740
Synteny	CsaV3_3G016740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTAATCACGCCCATAAGTTGTTTGATAAAAGTTCTAGTTCAACAAAATCTTAGAAAACACTAGTTGATTCAATTGTAAATATTAATAACAGTGATCTGATTTGCTATATCTGCAAGCAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAG

mRNA sequence

ATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAG

Coding sequence (CDS)

ATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAG

Protein sequence

MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS*

Homology

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BLAST of CsaV3_3G016740 vs. NCBI nr
Match: XP_004140796.1 (uncharacterized protein LOC101221214 [Cucumis sativus] >KGN57335.1 hypothetical protein Csa_009933 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240

[Close]

BLAST of CsaV3_3G016740 vs. NCBI nr
Match: XP_008439159.1 (PREDICTED: uncharacterized protein LOC103484039 [Cucumis melo] >KAA0033607.1 uncharacterized protein E6C27_scaffold239G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 5.8e-121
Identity = 224/240 (93.33%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsaV3_3G016740 vs. NCBI nr
Match: TYK22273.1 (uncharacterized protein E5676_scaffold440G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 3.8e-120
Identity = 223/240 (92.92%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDV TLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVGTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsaV3_3G016740 vs. NCBI nr
Match: XP_038895315.1 (uncharacterized protein LOC120083567 [Benincasa hispida])

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109
Identity = 204/240 (85.00%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF++K   LGGKSI F PT CLNSQNQET TIPT TKIPK +ISTV
Sbjct: 1   MGCKLNSPNTPILFKFASKIPKLGGKSINFCPTFCLNSQNQETSTIPTDTKIPKFDISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISR+PDFQY+AEGGTGTGS K+  D+ SN  + VSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRYPDFQYDAEGGTGTGSAKVCGDSSSN-HVSVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPE F G+INQESGKVELEFE+KF+FSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFEAKFMFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEES+G IRSG+GERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESKGSIRSGQGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 239

[Close]

BLAST of CsaV3_3G016740 vs. NCBI nr
Match: XP_022968031.1 (uncharacterized protein LOC111467398 [Cucurbita maxima])

HSP 1 Score: 375.9 bits (964), Expect = 2.5e-100
Identity = 187/244 (76.64%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60
           MGCKLN+PN P+LFKF TK   LGGK+    P  CL+SQNQETPTI T     T+IPKSN
Sbjct: 1   MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
            STVHFKSLTACKLGISR+PDF+YNAEGGTGTGS KI  D GS   + VSFDV TLYIPP
Sbjct: 61  FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGS-GEVSVSFDVGTLYIPP 120

Query: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
           LTTQTTKFLGLPLPPFLKID++PE F G+INQESGK+ELEF++KF+FS+G++Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180

Query: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
           KTVL+SEES+G IRSGKGERLD+ G CRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240

[Close]

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL
Match: A0A0A0L5S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240

[Close]

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL
Match: A0A5A7SWH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00420 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 224/240 (93.33%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL
Match: A0A1S3AYS2 (uncharacterized protein LOC103484039 OS=Cucumis melo OX=3656 GN=LOC103484039 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 224/240 (93.33%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL
Match: A0A5D3DFF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00280 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 223/240 (92.92%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDV TLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVGTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL
Match: A0A6J1HTQ8 (uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 187/244 (76.64%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60
           MGCKLN+PN P+LFKF TK   LGGK+    P  CL+SQNQETPTI T     T+IPKSN
Sbjct: 1   MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
            STVHFKSLTACKLGISR+PDF+YNAEGGTGTGS KI  D GS   + VSFDV TLYIPP
Sbjct: 61  FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGS-GEVSVSFDVGTLYIPP 120

Query: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
           LTTQTTKFLGLPLPPFLKID++PE F G+INQESGK+ELEF++KF+FS+G++Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180

Query: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
           KTVL+SEES+G IRSGKGERLD+ G CRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240

[Close]

BLAST of CsaV3_3G016740 vs. TAIR 10
Match: AT5G62140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62
Identity = 134/240 (55.83%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 4   KLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTVHFK 63
           K+NS  T I + + + R  +  KS +       NS N +    P TT++P + + +V FK
Sbjct: 5   KINSLTTTI-YNYKSPRRYINHKS-QNQIKLISNSLNPK----PNTTQLP-NTLYSVSFK 64

Query: 64  SLTACKLGISRFPDFQYNAEGGTGTGSVKIHDD--NGSNSRLLVSFDVDTLYIPPLTTQT 123
           ++   KLGISR+PDF+Y+  GG+G G+ K  DD    SNS L V F+V TLYIP LT+QT
Sbjct: 65  TIGTGKLGISRYPDFEYSPLGGSGAGTAKKIDDKNRASNSELSVCFNVATLYIPSLTSQT 124

Query: 124 TKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSI-GSLYRAPPLLVKTVL 183
           TKFLG PLPPFLKID+ PE FQG+INQESGKVELEF +KF F+  G +YRAP L+V+TVL
Sbjct: 125 TKFLGFPLPPFLKIDISPEIFQGTINQESGKVELEFMAKFFFTAGGGIYRAPALVVRTVL 184

Query: 184 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 241
           ++EES G  + GKGERLD++G CRLVGVA V+ IDDLF+N+FLSLP EC+A+L AII+ S
Sbjct: 185 TTEESIGENKRGKGERLDEEGKCRLVGVAKVETIDDLFMNTFLSLPAECLADLQAIISVS 237

The following BLAST results are available for this feature:

BLAST of CsaV3_3G016740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140796.1	2.8e-131	100.00	uncharacterized protein LOC101221214 [Cucumis sativus] >KGN57335.1 hypothetical ...	[more]
XP_008439159.1	5.8e-121	93.33	PREDICTED: uncharacterized protein LOC103484039 [Cucumis melo] >KAA0033607.1 unc...	[more]
TYK22273.1	3.8e-120	92.92	uncharacterized protein E5676_scaffold440G00280 [Cucumis melo var. makuwa]	[more]
XP_038895315.1	2.3e-109	85.00	uncharacterized protein LOC120083567 [Benincasa hispida]	[more]
XP_022968031.1	2.5e-100	76.64	uncharacterized protein LOC111467398 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G016740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G016740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5S5	1.3e-131	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1	[more]
A0A5A7SWH7	2.8e-121	93.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3AYS2	2.8e-121	93.33	uncharacterized protein LOC103484039 OS=Cucumis melo OX=3656 GN=LOC103484039 PE=...	[more]
A0A5D3DFF5	1.8e-120	92.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HTQ8	1.2e-100	76.64	uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398...	[more]

BLAST of CsaV3_3G016740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62140.1	1.0e-62	55.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35320	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT	coord: 1..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G016740.1	CsaV3_3G016740.1	mRNA