CsaV3_3G014570 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G014570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	flowering-promoting factor 1-like protein 1
Location	chr3: 10873068 .. 10873873 (+)
RNA-Seq Expression	CsaV3_3G014570
Synteny	CsaV3_3G014570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTTCTTTTGCCCAAAGGAAAAAAAGAAAAAAACTCACTTTCTCTCTTACTTCTTCTCTTCTCCTCTCTCCCTATATATATATATATATAAGTACACAACCTTCTCACCAAATCAATCCCTCCATTATTATTCTCCAAACCCAAAGAACCAACCAACGTCCAATTAAGTGTACAGTGTGAAAGAAAGGTAATAAAATGTCAGGTGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTGGAGAGAGCAGGTGCAGCAGAGACGACGACGTCCGGGGGATCAGGGAAAAGAAAAGTTCTGATATACACACCAACGAACGAGGCGATGACATCGTATGAGGTGCTAGAAAACAAGCTATCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAGGTTATGCAATTTCACAAACCATCGTCTGTGGATCTAATTTCACTTCCTAAAGATTTTAATAAGTTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAATTGTAGGACCCCTATACCCTTAACTATTACTATCTCTCTCTTTATAATTAATGCCTTTTTTCTTCTTCTTCTTCTTCTTTTGAGATGATGTAGTTTGTTTGTGTGATTGATTATTATTGTGTTTATGTGTGTGTTTGAAGGTAATAATATATATATAATATATATATATTGGGGGTGGTTTGATTATTATGTAAATTTTGTTGTTGAAATTACAATTCACAATGGAATTAAATTATATAAATTTGAAATTATTGTTTTTGAGTTTA

mRNA sequence

ATGTCAGGTGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTGGAGAGAGCAGGTGCAGCAGAGACGACGACGTCCGGGGGATCAGGGAAAAGAAAAGTTCTGATATACACACCAACGAACGAGGCGATGACATCGTATGAGGTGCTAGAAAACAAGCTATCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAGGTTATGCAATTTCACAAACCATCGTCTGTGGATCTAATTTCACTTCCTAAAGATTTTAATAAGTTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA

Coding sequence (CDS)

ATGTCAGGTGTTTGGATTTTCGACAACGGCGTGATCCGGCTAGTGGAGAGAGCAGGTGCAGCAGAGACGACGACGTCCGGGGGATCAGGGAAAAGAAAAGTTCTGATATACACACCAACGAACGAGGCGATGACATCGTATGAGGTGCTAGAAAACAAGCTATCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAGGTTATGCAATTTCACAAACCATCGTCTGTGGATCTAATTTCACTTCCTAAAGATTTTAATAAGTTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA

Protein sequence

MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH*

Homology

[Close]

BLAST of CsaV3_3G014570 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 4.8e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 114
           VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]

BLAST of CsaV3_3G014570 vs. NCBI nr
Match: KAA0049489.1 (flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTT---SGGSGKRKVLIYTPTNEAMTSYEVLENKLSML 60
           MSGVWIFDNGVIRLVERAGA ETTT   SGGSGKRKVL+YTPTNEAMTSYEVLENKLSML
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 114
           GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]

BLAST of CsaV3_3G014570 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46
Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWE
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of CsaV3_3G014570 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 95/112 (84.82%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGA ET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWE
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVET---GAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of CsaV3_3G014570 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-46
Identity = 94/112 (83.93%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIY PTNEAMTSY +L+NKL+ LGWE
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-28
Identity = 57/112 (50.89%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTS---GGSGKRKVLIYTPTNEAMTSYEVLENKLSML 60
           M+GVW+F +G++R VE  G+ E++++   GG G+RKVL++ P+ E + SYEVLE +L  L
Sbjct: 1   MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLREL 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
           GWE Y  D  ++QFH+ S+V LIS+P+DF+K K  H+YDIVV+ RN+F+V+D
Sbjct: 61  GWERYLTDPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.7e-28
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+F NGV+RLVE+  A   T   G G+RK L++TP+ + ++SY  LE +L+ LGWE
Sbjct: 1   MSGVWVFKNGVVRLVEKQQATAGTAVAG-GRRKALVHTPSGQVVSSYAALEARLTALGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
            YYED  + QFHK  S+DLISLP DF+   + H+YDIVV+NR+ F+V D
Sbjct: 61  RYYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+F+NGVIRLVE    +   ++   G+R VL+Y PT EA++SY  LE  L  LGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
            Y+  D +++Q+HK SS+DLISLP+DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.0e-27
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSG---------KRKVLIYTPTNEAMTSYEVLE 60
           MSGVW+F NGV++LVE   A+  +  GG G         +RK L++ PT E +TSY  LE
Sbjct: 1   MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLE 60

Query: 61  NKLSMLGWEVYYEDG--------EVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRN 111
            KL+ LGWE YY  G         ++QFHK SSVDLISLPKDF++  + H+YDIVV+NR+
Sbjct: 61  RKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRD 120

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-26
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+F NGVIRLVE    + + T     +RKV++Y PT E ++SY  LE  L  LGWE
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDT---QNRRKVMVYLPTGEVVSSYSTLEQILQSLGWE 60

Query: 61  VYYEDG--EVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
            Y+  G  +++QFHK SS+DLISLP+DF K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 114
           VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.3e-55
Identity = 111/116 (95.69%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTT---SGGSGKRKVLIYTPTNEAMTSYEVLENKLSML 60
           MSGVWIFDNGVIRLVERAGA ETTT   SGGSGKRKVL+YTPTNEAMTSYEVLENKLSML
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 114
           GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.8e-47
Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWE
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 95/112 (84.82%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGA ET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWE
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVET---GAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL
Match: A0A6J1IC95 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111472346 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 80/112 (71.43%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+FDNGVIRL E  G +       +  R VLIYT TNEAMT+  VL+NKL  LGWE
Sbjct: 1   MSGVWVFDNGVIRLAEGGGGSR------NRGRNVLIYTATNEAMTTLTVLKNKLLSLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 113
           +YYED E++QFHKPSSVDLISLP DFNK+KARHLYD+VVRNRNLF VKDMQS
Sbjct: 61  IYYEDAEIVQFHKPSSVDLISLPTDFNKVKARHLYDVVVRNRNLFHVKDMQS 106

[Close]

BLAST of CsaV3_3G014570 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+F+NGVIRLVE    +   ++   G+R VL+Y PT EA++SY  LE  L  LGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
            Y+  D +++Q+HK SS+DLISLP+DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of CsaV3_3G014570 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60
           MSGVW+F NGVIRLVE    + + T     +RKV++Y PT E ++SY  LE  L  LGWE
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDT---QNRRKVMVYLPTGEVVSSYSTLEQILQSLGWE 60

Query: 61  VYYEDG--EVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKD 110
            Y+  G  +++QFHK SS+DLISLP+DF K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of CsaV3_3G014570 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 59/124 (47.58%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MSGVWIFD-NGVIRLVER------AGAAETTTSGGSG----KRKVLIYTPTNEAMTSYEV 60
           MSGVW+F+ NGV+RLVE         ++E+++SGG+     +RK+L++ P++E ++SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LENKLSMLGWEVYY---EDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQ 111
           LE  L  LGWE YY       ++QFHK +S+DLISLP+DF+K  + H+YDIVV+N N+F 
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 177

The following BLAST results are available for this feature:

BLAST of CsaV3_3G014570 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57101.1	4.8e-57	100.00	hypothetical protein Csa_010574 [Cucumis sativus]	[more]
KAA0049489.1	1.3e-54	95.69	flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613...	[more]
XP_022956217.1	1.0e-46	85.71	flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 F...	[more]
XP_022979994.1	2.2e-46	84.82	flowering-promoting factor 1-like protein 1 [Cucurbita maxima]	[more]
XP_023528953.1	5.0e-46	83.93	flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G014570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0E1D7	1.7e-28	50.89	Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9LGE3	3.7e-28	54.13	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9LXB5	1.8e-27	52.73	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q8LR63	7.0e-27	49.61	Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
O23624	3.5e-26	52.25	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]

BLAST of CsaV3_3G014570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAK6	2.3e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1	[more]
A0A5A7U7L7	6.3e-55	95.69	Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GVQ4	4.8e-47	85.71	flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IY48	1.1e-46	84.82	flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IC95	2.7e-37	71.43	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CsaV3_3G014570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10625.1	1.3e-28	52.73	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	2.5e-27	52.25	flowering promoting factor 1	[more]
AT4G31380.1	1.4e-25	47.58	FPF1-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF6	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..110
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G014570.1	CsaV3_3G014570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development