CsaV3_3G013500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G013500
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 10186916 .. 10187199 (-)
RNA-Seq ExpressionCsaV3_3G013500
SyntenyCsaV3_3G013500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAGTAGATTTGAAAAAAGAGAGAGGGTGTGAAAGTGAAGCACAAGCAGTGTAATTGGTAATTGGCAATTGGCATGTGAGATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

mRNA sequence

ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

Coding sequence (CDS)

ATGGAATTTGAAGCGGGCCTACAATGGATGATCCGAGAAGACTATGGAACGGATTGGGCCTCGGAGGCCCATGAGAAAGCAAGGGATAGGCAACATCGTGGGGAACCCACATGGTGTGGAAAGCGACTGAGAGTCAAGGCCGGAAAAACAATGTCGCATAGTCTTAAATGGGACGTCGTTTTAATCGACATGTCGGGTGGAAGATAG

Protein sequence

MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVVLIDMSGGR*
Homology
[Close]
BLAST of CsaV3_3G013500 vs. NCBI nr
Match: KGN57003.1 (hypothetical protein Csa_009706 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60
          MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV
Sbjct: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60

Query: 61 LIDMSGGR 69
          LIDMSGGR
Sbjct: 61 LIDMSGGR 68

[Close]
BLAST of CsaV3_3G013500 vs. ExPASy TrEMBL
Match: A0A0A0L5M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149340 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.4e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60
          MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV
Sbjct: 1  MEFEAGLQWMIREDYGTDWASEAHEKARDRQHRGEPTWCGKRLRVKAGKTMSHSLKWDVV 60

Query: 61 LIDMSGGR 69
          LIDMSGGR
Sbjct: 61 LIDMSGGR 68

The following BLAST results are available for this feature:
BLAST of CsaV3_3G013500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57003.11.1e-32100.00hypothetical protein Csa_009706 [Cucumis sativus][more]
BLAST of CsaV3_3G013500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G013500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5M55.4e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149340 PE=4 SV=1[more]
BLAST of CsaV3_3G013500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013500.1CsaV3_3G013500.1mRNA