CsaV3_3G010470 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G010470
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ATP synthase subunit delta', mitochondrial
Location	chr3: 8400693 .. 8403313 (+)
RNA-Seq Expression	CsaV3_3G010470
Synteny	CsaV3_3G010470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTACGAGGCTCAGATCCACAATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTTCAAACAGCTTCAGCGGAACCCTTCCACTTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTTAGTCTTCCAACATTTGTTTTGTATGTGATTTTTTTTTTTTTTGTGTGTGTTTGAATCTTGTCCTTGATTATGAATTTTTGCTACATTTGATTTGATTTGATTTTATCTTCTGTGAAATTTTCATTTCGTAGTGCCAATTTTGATGTAAAATTATGAGTTGAATCTTCGTGACAAATGCACTCGAATGTTTAAGGGGAAATGCTCGACGTAAAACAAGTATTTCGGTTCTGCAGTTGCGGATGTTGAACTAGAAATGAATTTTATCCTTACTGAGATCGTTTATTGTATTCTTTACTTAATCAGTGTAGATCGTAGATTTCATTTTCTTGTTTTTGTTTTGAATTTGATATTTAGCATTCATTTTCTCGTACCAATTCGATCACACTCGAGGATGTGGCGTGATCTTTTACATTCGTAGACATGGTGATGCTAAGATCAGGGAATAAGAATACTGTAAATGCCATGTTCTTCCCTCATGGTCAAGGACCCTCTTAAGTGTTGTTTATATGAAGCGCAAAGAAATGCTACATCTCCCTATCTAGTAGCTCAGTCCTGTGGTTTCCATTTGAGCATCGGTAATATTAAGAGATAAACCAAACTTTGCCGATAAATTAAGGTGGCGTTTTCATGTTATCATCAATTCTTAAGTTTATATTTCTTTCTCGGTTCTCGCATCCGTAAACCTATTCCGTAACTCTCCGCTTTTACCTATCGCTGTTGTTTTCTGAATCCCTGGCCAGAACTTTGGTGCTTAGTTGAATGGGGAAATATCGTCTATGGGGTAAAGTTACATATTCTATTATCATCAGTACTTAAAATCCAAAAGAAGCTACTGTTGGCAAGAACCCTGTTCACTAATGCCTTCTGTTTCCTGTTTTTGGTTTAATAAACTTTATAGAAGCAAATAATATGTACAATAGAAATGAGGATCAAAAGGGTGCCAATTATTAAAGAGATTACAGACTTCCAATTAGTTTGAGTCACATAGGGAGAATTAACACTAAAGAATTTAGAGGTAAAATTGACCAATGTTTGCTACCATCTATTATCCTCTAAAGATGTTTTGGCTTTTCCCATCGCTCAACCCCATTAATTAGTGAATGCTACATTTCAGTAGAAATTAGTAGGCAAGGAAAAAGTACGTTGTCTGTATATTAGGTGATAAGAAATTATGCTTCCAAGTTTATTGTTAATGTGTCGGCATTTATTGGTTTTTTTCTACATTTCTCTTCCTTAACTGATGGGATGCTAAAATTTTTCTCTAATTCAACTTCCATTTTTCCATTTTGTTTAACTGCTAGAAAGATATAGAAGTAAGGCTCTAGTGGTTGAAATTTTTTATCTCTGGGAAGGAAACCCTGATTTTGCAGTTCGATTACTTGTTGCTGTTATTTCAAAATTTTCGTCTTTCTTCGTTCTGAACAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAGTTTCCCTGGCTCGTAAATCGGCCACCTTTCAGGATTATCTATTTACCAATTGTATGTTCATAACACTGCCTCATTGACATTTTGAGTTGTCTTCTTTGGTGGAAATGCCCTCTGGAACATCATCATCTTGAGGCTTACCTTTCTTGTGTTGAATTTGAAGTGATTCACAAATAAATATATTAGGATGGTTTTTTGTGCTTGGCCTTGTAGCAGCAGCTCATAATCTGTTGAAACCATACCTCACAAAACAAGGAAATATTTTCATTTGAATCTGTATGGATGATTCAAATCATGTCTTATTTTGCAACAATTTTAAACACAACAATATTCTGAATCTATTTGCATTCCTTTCTTTTCTCTTTGATGTGATTGACGGTTGTACGGTGTTAGGGTATGTTTGAGAGTGATTATAAAATGTTTCCTTTGTTTTAAAAATCT

mRNA sequence

ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG

Coding sequence (CDS)

ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG

Protein sequence

MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG*

Homology

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BLAST of CsaV3_3G010470 vs. NCBI nr
Match: XP_004133965.1 (ATP synthase subunit delta', mitochondrial [Cucumis sativus] >KGN56682.1 hypothetical protein Csa_011353 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.6e-102
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. NCBI nr
Match: XP_008438277.1 (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo] >KAA0049112.1 ATP synthase subunit delta' [Cucumis melo var. makuwa] >TYK17451.1 ATP synthase subunit delta' [Cucumis melo var. makuwa])

HSP 1 Score: 372.1 bits (954), Expect = 3.1e-99
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

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BLAST of CsaV3_3G010470 vs. NCBI nr
Match: XP_038898411.1 (ATP synthase subunit delta', mitochondrial [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-95
Identity = 187/200 (93.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLARPFLSAR RSFSTDLPAA S  DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASSLLARPFLSARIRSFSTDLPAAPSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDA+QVQKGLAEFTQKL SASTDLE
Sbjct: 121 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLTSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. NCBI nr
Match: KAG6582512.1 (hypothetical protein SDJN03_22514, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.4 bits (890), Expect = 8.1e-92
Identity = 179/200 (89.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLAR   SARTRSFS DLPAA S  DAFV+AWKK+IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++ KKYFVSSGFAFIHGNSYADIIAVEAVP+EQIDA+QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDASQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALN+A+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

[Close]

BLAST of CsaV3_3G010470 vs. NCBI nr
Match: XP_023528709.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 178/200 (89.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLAR   SARTRSFS DLPAA S  DAFV+AWKK+IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++ KKYFVSSGFAFIHGNSYADIIAVEAVP+EQIDA+QVQKGLA+FTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDASQVQKGLADFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALN+A+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot
Match: Q40089 (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.0e-81
Identity = 155/200 (77.50%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFR +S LLAR       R FSTDLPA  +    FV AWKK+IPN+DPPKTP ++MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPY+SEL+ KEVDMVIIPATTGQMGVLPGHV TIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYFVS GFAFIH NS+ADIIAVEAVP+++IDA  VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot
Match: Q96252 (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-75
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSA-----RTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot
Match: Q41000 (ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 144/201 (71.64%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MFRRA-STLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPR 60
           MFRRA ST L+R   ++ TR FSTD+    +N  +FV AW+KV PNIDPPKTPL F+  R
Sbjct: 1   MFRRATSTFLSR---ASATRRFSTDVATPATN-SSFVEAWRKVSPNIDPPKTPLEFLKTR 60

Query: 61  PATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           P  PS+IP+KLTVN VLPY+S+L+AKEVD VIIPATTG+MGVLPGHV TIAELKPGVL+V
Sbjct: 61  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 120

Query: 121 HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDL 180
            EG++  KYFVSSGF FIH NS ADIIAVEAVP+ Q+D   VQKGL EFTQKLNSA+TDL
Sbjct: 121 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 180

Query: 181 EKAEAQIGVDVHSALNSALTG 201
           EK EAQIG+DV SALNSALTG
Sbjct: 181 EKREAQIGIDVDSALNSALTG 197

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot
Match: Q55F42 (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=atp5f1d PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.9e-21
Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 61  ATPSSIPSK-LTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           AT +S  S  LT +L+ P+ +    K+  +V +P   G  GV   HVP IAELKPGV+ +
Sbjct: 27  ATEASATSDLLTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQI 86

Query: 121 -HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTD 180
            HE  +++K+F+S GFAF++ ++   I  +EAVPI+Q+DA +V+ GLA +TQ  N A  +
Sbjct: 87  NHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEE 146

Query: 181 LEKAEAQIGVDVHSAL 195
             KA A IG++ +  +
Sbjct: 147 NAKAVALIGLETYQQM 162

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot
Match: Q92196 (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 64  SSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGS 123
           + I  KL ++L LP+ +  S+++V  V IPA +G MG+L  HVP+I  L+PGV+ V E S
Sbjct: 26  AEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDS 85

Query: 124 EIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAE 183
             +K+FVS GFA +H N+   I  VEA P+E      ++  L E  +    + ++ +K E
Sbjct: 86  GSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKME 145

Query: 184 AQIGVDVHSALNSAL 199
           AQI  +V+ AL  AL
Sbjct: 146 AQIEAEVYEALQHAL 160

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL
Match: A0A0A0L7T8 (ATP-synt_DE_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G128910 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.2e-102
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL
Match: A0A5A7TZZ3 (ATP synthase subunit delta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003150 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL
Match: A0A1S3AW39 (ATP synthase subunit delta', mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483438 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL
Match: A0A6J1IET0 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111473489 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 180/200 (90.00%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLL RP LSAR RSFS DLPAA S  DAFV+AWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIP+KLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+ KKYFVSSGFAFIHGNSYADIIAVEAVP++QID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL
Match: A0A6J1E9L4 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111432026 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 178/200 (89.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLAR   SARTRSFS DLPAA S  DAFV+AWKK+IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++ KKYFVSSGFAFIHGNSYADIIAVEAVP+EQID +QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDTSQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALN+A+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

[Close]

BLAST of CsaV3_3G010470 vs. TAIR 10
Match: AT5G47030.1 (ATPase, F1 complex, delta/epsilon subunit )

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-76
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MFRRASTLLARPFLSA-----RTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

The following BLAST results are available for this feature:

BLAST of CsaV3_3G010470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133965.1	6.6e-102	100.00	ATP synthase subunit delta', mitochondrial [Cucumis sativus] >KGN56682.1 hypothe...	[more]
XP_008438277.1	3.1e-99	96.50	PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo] >KAA0049112...	[more]
XP_038898411.1	6.0e-95	93.50	ATP synthase subunit delta', mitochondrial [Benincasa hispida]	[more]
KAG6582512.1	8.1e-92	89.50	hypothetical protein SDJN03_22514, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023528709.1	1.8e-91	89.00	ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G010470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40089	3.0e-81	77.50	ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1	[more]
Q96252	1.9e-75	71.22	ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q41000	2.4e-70	71.64	ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1	[more]
Q55F42	5.9e-21	41.18	ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 G...	[more]
Q92196	1.1e-19	40.00	ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD P...	[more]

BLAST of CsaV3_3G010470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7T8	3.2e-102	100.00	ATP-synt_DE_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1289...	[more]
A0A5A7TZZ3	1.5e-99	96.50	ATP synthase subunit delta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3AW39	1.5e-99	96.50	ATP synthase subunit delta', mitochondrial OS=Cucumis melo OX=3656 GN=LOC1034834...	[more]
A0A6J1IET0	1.1e-91	90.00	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E9L4	1.1e-91	89.00	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_3G010470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47030.1	1.3e-76	71.22	ATPase, F1 complex, delta/epsilon subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
None	No IPR available	GENE3D	1.20.5.440		coord: 157..199 e-value: 1.6E-8 score: 36.3
None	No IPR available	PANTHER	PTHR13822:SF20	ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL	coord: 1..200
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	TIGRFAM	TIGR01216	TIGR01216	coord: 72..185 e-value: 6.0E-20 score: 69.6
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	PANTHER	PTHR13822	ATP SYNTHASE DELTA/EPSILON CHAIN	coord: 1..200
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	HAMAP	MF_00530	ATP_synth_epsil_bac	coord: 68..188 score: 15.722497
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	CDD	cd12152	F1-ATPase_delta	coord: 70..193 e-value: 4.54087E-38 score: 126.087
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	GENE3D	2.60.15.10		coord: 58..156 e-value: 1.5E-26 score: 94.3
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	SUPERFAMILY	51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain	coord: 70..151
IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	PFAM	PF02823	ATP-synt_DE_N	coord: 70..141 e-value: 8.1E-18 score: 64.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G010470.1	CsaV3_3G010470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism