CsaV3_3G009120 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G009120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger, LIM-type
Location	chr3: 7545703 .. 7547579 (-)
RNA-Seq Expression	CsaV3_3G009120
Synteny	CsaV3_3G009120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTTAGTTCTTAAAGAAAATCGATGTAATTTAGAAATGGTCAGAGCAAAAACGTCCTTGTTTTGCTCAAAAGGCATAGTACAATATCCGAAATTGGAGCATCTCCAACAAGTAAATTTGAGGTTTCTTCCTCATTTGGATAGAAAAAAAACCTCTTAATTCCAACATGATCTGGTATTTAAATTTACTTTTCCTGTAAACACAAATCCAAAGTTTTTCCCATTCTCTTTTTCTATCGTTTCCTTTTTCATAATCTTGTCTGAGATCTAATCCTCAGACACACTTGGTAAACAATTGTATTTGTTTGTTAGTTTGTTGTTCTTTTGTAATCATCCCCTTTTTGCAGTTTGTCGGAAAGCTACCGTTTTTCGGTTCGAGTTCGTTGTTGTCGTAAACAACAGAGGAAGGAATAAAGATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGGTATGCTTTTATGTTCTTCTTTCATTTGTTCTTATTATGTGTCGTTCGTTATGATATCGATAATTTGACTCGGAGTCGATGGTTATGACAGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGGTAAACATATCTTTTTCATTATATATAAACCTTTTGCTTGTAAGGGAAAAAATAAAAACCTTCCTAACATTCTCTCGTTTTCATTATATTGAAATGGCAACAGCCAAGCCTTCTGAGAAGCAAAATGATCTGGTATGCTCTCATTCTTTTCATTTTTCGTGCGGTTAGCATTCGTTTGATAACGGTTTGATCTTTAGTATTTAAATCACTCACAAACATGTCACAATGCGTACAAGATTTTACTTTTGCGTAGATTAGGGGTCTAGATCTCCTGCGATTTATATAATCATAACTAGATGTATAACTTTGTAACTTTCGAAACGTGTAGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTCTATAGTTCTTCATTTTTCTCTCTAAAAAATTATATATATATATATATACAGGTAGAATGTTACTAGATTTGTTGACTGATCAAAAGCTTTTTTTTGGTTCCTAAATAAAAAAAAAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACTTAAGATGGATTTTTCTGCTTTCCATCTACCATAAATTTGAGAATCCTTGGCTATCTTATAATTTTTTTGTCTCTCTTTCTCTTTTGTTTTCAAATTCATTTGTAACAAGTTTTCATTACCATTTTGTGATTTTCTTTTTCGTTTTAAAGCAAATTCAAAGCATTATTTGTATGCCATCAGAGCATAGAAAACAATGTACCATAGTTTGTTCTGTCAGTGAGAGGAGAAGCTGGAATAAAGCACATAGATTGCTATCATTCCCAATCACTAAAGACAATTTCCCCTTTTTTTGTCCAAAATACTCTCTTTCTTTCTCTCTCCC

mRNA sequence

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGCCAAGCCTTCTGAGAAGCAAAATGATCTGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACTTAA

Coding sequence (CDS)

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGCCAAGCCTTCTGAGAAGCAAAATGATCTGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAPTPPPEPAEEEEGATEAQPQADEAPVEQT*

Homology

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BLAST of CsaV3_3G009120 vs. NCBI nr
Match: XP_004134333.3 (LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 hypothetical protein Csa_009827 [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 4.8e-119
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 210

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BLAST of CsaV3_3G009120 vs. NCBI nr
Match: XP_011650764.2 (LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 4.5e-117
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 209

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BLAST of CsaV3_3G009120 vs. NCBI nr
Match: XP_008438078.1 (PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 208

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BLAST of CsaV3_3G009120 vs. NCBI nr
Match: XP_038906220.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 202/237 (85.23%), Postives = 204/237 (86.08%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLS--------------- 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLS               
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSVRFFFSLIRIMSFVM 60

Query: 61  ------------MSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAP 120
                       MSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQ +KPSEKQNDLQSRAP
Sbjct: 61  ISIFDPSRWLRQMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTSKPSEKQNDLQSRAP 120

Query: 121 SKLSSMFSGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVL 180
           SKLSSMFSGTQDKCA CSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVL
Sbjct: 121 SKLSSMFSGTQDKCAVCSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVL 180

Query: 181 YCKHHFAQLFMIKGNYNHVLEAAANKKAPTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           YCKHHFAQLFMIKGNYNHVLEAAANKKA TPPPEPAEEEEG  EAQPQA+EA VEQT
Sbjct: 181 YCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPEPAEEEEGDAEAQPQAEEAAVEQT 237

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BLAST of CsaV3_3G009120 vs. NCBI nr
Match: KAA0048984.1 (LIM domain-containing protein PLIM2c-like [Cucumis melo var. makuwa] >TYK17580.1 LIM domain-containing protein PLIM2c-like [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108
Identity = 198/210 (94.29%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQN K        QSRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNGK-----YIFQSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 204

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BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.1e-81
Identity = 146/201 (72.64%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQ A  +EK ND  ++AP++LSS FSGTQDKCAAC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 PT---PPPEPAEEEEGATEAQ 200
            T      EP E+E   TE +
Sbjct: 183 STAEEDKTEPKEDEANPTEEE 202

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BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.0e-81
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKCAAC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 AP---TPPPEP-------AEEEEGATEA 199
                T PPEP       A+EE G +E+
Sbjct: 181 TASGNTLPPEPTEDVAVEAKEENGVSES 205

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BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.9e-78
Identity = 145/214 (67.76%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKCA C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------APTPPPEPAEEEEGATEAQPQADEAPVE 209
                   +PP +  + ++ A+  + + D+A  E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

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BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.0e-71
Identity = 121/183 (66.12%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKP-SEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ AKP ++K     +R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKA 182
           K+A
Sbjct: 181 KRA 183

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BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.5e-71
Identity = 133/203 (65.52%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT DKC ACDKTV+ ++LL+ +G PYHK+CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQ-SRAPSKLSSMFSGTQDKCAACSKTVYPLEK 120
           HFEQLFKE+G+FSK F    P  +  D + +RAPSK+ S FSGTQDKCAAC KTVYPLEK
Sbjct: 61  HFEQLFKETGSFSKKF---APGCRSTDKELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNH-------- 180
           +TLEGE YHK+CF+C+HGGC LT SSYAAL+GVLYCK HF QLFM KG+YNH        
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 -VLEAAANKKAPTPPPEPAEEEE 194
            VL     ++ P PPP     E+
Sbjct: 181 EVLPEVVPEEQPAPPPPDENRED 200

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BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL
Match: A0A0A0L4A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL
Match: A0A1S3AW36 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.8e-114
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 208

[Close]

BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL
Match: A0A5D3D1T7 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004500 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 198/210 (94.29%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQN K        QSRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNGK-----YIFQSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 204

[Close]

BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL
Match: A0A6J1IRA7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111479786 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.8e-106
Identity = 188/208 (90.38%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVE 209
           A TPPPE AEE+E    A+ Q++E  VE
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVE 208

[Close]

BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL
Match: A0A6J1E9B9 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111431888 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.0e-106
Identity = 188/208 (90.38%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVE 209
           A TPPPE AEE+E    A+ Q++E   E
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAGE 208

[Close]

BLAST of CsaV3_3G009120 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 146/201 (72.64%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQ A  +EK ND  ++AP++LSS FSGTQDKCAAC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 PT---PPPEPAEEEEGATEAQ 200
            T      EP E+E   TE +
Sbjct: 183 STAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of CsaV3_3G009120 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-82
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKCAAC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 AP---TPPPEP-------AEEEEGATEA 199
                T PPEP       A+EE G +E+
Sbjct: 181 TASGNTLPPEPTEDVAVEAKEENGVSES 205

[Close]

BLAST of CsaV3_3G009120 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-79
Identity = 145/214 (67.76%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKCA C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------APTPPPEPAEEEEGATEAQPQADEAPVE 209
                   +PP +  + ++ A+  + + D+A  E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of CsaV3_3G009120 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 268.9 bits (686), Expect = 3.6e-72
Identity = 121/183 (66.12%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKP-SEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ AKP ++K     +R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKA 182
           K+A
Sbjct: 181 KRA 183

[Close]

BLAST of CsaV3_3G009120 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.8 bits (678), Expect = 3.0e-71
Identity = 119/182 (65.38%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ AK ++K     +R PS+++  FSGTQ+KCA CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KA 182
           ++
Sbjct: 181 RS 182

The following BLAST results are available for this feature:

BLAST of CsaV3_3G009120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134333.3	4.8e-119	100.00	LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 ...	[more]
XP_011650764.2	4.5e-117	99.52	LIM domain-containing protein PLIM2b isoform X2 [Cucumis sativus]	[more]
XP_008438078.1	7.9e-114	98.10	PREDICTED: LIM domain-containing protein PLIM2c-like [Cucumis melo]	[more]
XP_038906220.1	1.5e-109	85.23	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
KAA0048984.1	3.8e-108	94.29	LIM domain-containing protein PLIM2c-like [Cucumis melo var. makuwa] >TYK17580.1...	[more]

BLAST of CsaV3_3G009120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	3.1e-81	72.64	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q1ECF5	7.0e-81	69.71	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	1.9e-78	67.76	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
O04193	5.0e-71	66.12	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q7F9R9	6.5e-71	65.52	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of CsaV3_3G009120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4A1	1.1e-116	99.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122620 PE=4 SV=1	[more]
A0A1S3AW36	3.8e-114	98.10	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]
A0A5D3D1T7	1.8e-108	94.29	LIM domain-containing protein PLIM2c-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1IRA7	3.8e-106	90.38	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9B9	5.0e-106	90.38	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsaV3_3G009120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	2.2e-82	72.64	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	5.0e-82	69.71	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	1.4e-79	67.76	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	3.6e-72	66.12	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	3.0e-71	65.38	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 106..158 e-value: 4.3E-13 score: 59.5 coord: 9..61 e-value: 1.1E-12 score: 58.2
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 107..162 e-value: 9.6E-11 score: 41.8 coord: 10..65 e-value: 3.8E-13 score: 49.5
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 105..165 score: 12.503799
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4839
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 6..74 e-value: 3.7E-19 score: 70.7 coord: 101..171 e-value: 5.7E-19 score: 70.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..210
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..204
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..204
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 99..132
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 133..172
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G009120.1	CsaV3_3G009120.1	mRNA