CsaV3_3G007310 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G007310
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger CCCH domain-containing protein 19-like
Location	chr3: 6508998 .. 6510432 (+)
RNA-Seq Expression	CsaV3_3G007310
Synteny	CsaV3_3G007310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGGAGATTCAAAAGCAGAGGACTGGTGCTTCGTCTGCAAGGATGGCGGAGATTTGATTCTCTGCAACAATGGGTTGTTGTTTTTGTTTTGTCTTCACACACTTTTCTCATGCCCTGCTCTTCCTCCCTTCACATCCTCTGCATGATCTCATCATTTGTTTTTTTTCTTTTCAGCAACTGCTCAAAGGTGTACCATCTCGAATGTCTCGGTCTCGACTCCGATTACCATTGCCCAACCACCTCTCCTATTCAACAAGAGTGGACTTGCGGTACTTAACCCCACCATTCCATTCATCTGCTTTCTACTACCAATCTCCAAACATTCTTAATATATATATCTATTTCTTTCTTCAGATTGCCATTCTTGTTCTTCCTGTAAAGAAGCCTCCGAGTTTCACTGCTTCTGTTGCCCAACCTCTTTCTGCAACAACTGTATCAAATCTGTCAAGTTTATCCACTTGCGACCCAACAAAGGCCTATGTTCAGACTGCTGGACTCTCGTTCGTCTTGCTGAGAAACTTTCATTCTCCAAGGTATTCTCTTTTATTTCCTATTTCCTTAATTCACTCGTTTCTAATTCTTTCTTCCCAATGCAACTAGTAGAAAGCTGTGGATTTCGAAGACAGAGATACACACGAGTGCCTGTTCAAAGAATATTGGGATATTGTCAAACAAGAAGAAGGGTTAAGCAGACACGTTCTTGTCGCTGTGGAACAAACCCGTTCCTCCAAAAAGGCCACCAGGCAAATGAAGGGCTACATCCCAACGCCAACACGGCTTCCCAGTACTCTTCAACATGAACACACCGACTCCAAGTCCAAATCCAAGTCCAAGCCCAAGCCCAATAATAATAACACACACAAATTCTTGGGTTGGGGTTCCAAACCTCTCATTGAATTTCTCACTTCCTTTGGCGTGGATTCAACCAAGGAACTATCTCCATCCGAAGTGAGCTCCATCATCTTGAAGTACGTTCAACAGAATGACCTTATCCATCCCATAAATAACAAGAAAGTCATCTGTGACAGACCCCTGCATCTCATTTTTAAGAAGAACACTGTATCCATGAAGCATATTGATCTTCTCTTGGGACCACATCTTTTTCATGACAATAATGAAAATCATGGCATTGGCGAAAAGAGATCAAGTTTTGAACCGGACGAACCACAAATTAATGGGGATGCTGGTTTGAACAAGTACTACAAAACATTGAACTGCTCTCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTTTACTTGAGGAGGAGCTTAGTGGAGGATCTTCTAAAACAACCTGAAAGCTTCGAGGACAAGGTGGTGGGAAGTTTTGTTAAGATCATAGACACAAATTCCAGCCAATTTCAATCTAAAGTGAAAATTTCTCAACAGCTCTTGCAAGTGACAGGTTGA

mRNA sequence

ATGGAGGAGGGAGATTCAAAAGCAGAGGACTGGTGCTTCGTCTGCAAGGATGGCGGAGATTTGATTCTCTGCAACAATGGCAACTGCTCAAAGGTGTACCATCTCGAATGTCTCGGTCTCGACTCCGATTACCATTGCCCAACCACCTCTCCTATTCAACAAGAGTGGACTTGCGATTGCCATTCTTGTTCTTCCTGTAAAGAAGCCTCCGAGTTTCACTGCTTCTGTTGCCCAACCTCTTTCTGCAACAACTGTATCAAATCTGTCAAGTTTATCCACTTGCGACCCAACAAAGGCCTATGTTCAGACTGCTGGACTCTCGTTCGTCTTGCTGAGAAACTTTCATTCTCCAAGGAACTATCTCCATCCGAAGTGAGCTCCATCATCTTGAAGTACGTTCAACAGAATGACCTTATCCATCCCATAAATAACAAGAAAGTCATCTGTGACAGACCCCTGCATCTCATTTTTAAGAAGAACACTGTATCCATGAAGCATATTGATCTTCTCTTGGGACCACATCTTTTTCATGACAATAATGAAAATCATGGCATTGGCGAAAAGAGATCAAGTTTTGAACCGGACGAACCACAAATTAATGGGGATGCTGGTTTGAACAAGTACTACAAAACATTGAACTGCTCTCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTTTACTTGAGGAGGAGCTTAGTGGAGGATCTTCTAAAACAACCTGAAAGCTTCGAGGACAAGGTGGTGGGAAGTTTTGTTAAGATCATAGACACAAATTCCAGCCAATTTCAATCTAAAGTGAAAATTTCTCAACAGCTCTTGCAAGTGACAGGTTGA

Coding sequence (CDS)

ATGGAGGAGGGAGATTCAAAAGCAGAGGACTGGTGCTTCGTCTGCAAGGATGGCGGAGATTTGATTCTCTGCAACAATGGCAACTGCTCAAAGGTGTACCATCTCGAATGTCTCGGTCTCGACTCCGATTACCATTGCCCAACCACCTCTCCTATTCAACAAGAGTGGACTTGCGATTGCCATTCTTGTTCTTCCTGTAAAGAAGCCTCCGAGTTTCACTGCTTCTGTTGCCCAACCTCTTTCTGCAACAACTGTATCAAATCTGTCAAGTTTATCCACTTGCGACCCAACAAAGGCCTATGTTCAGACTGCTGGACTCTCGTTCGTCTTGCTGAGAAACTTTCATTCTCCAAGGAACTATCTCCATCCGAAGTGAGCTCCATCATCTTGAAGTACGTTCAACAGAATGACCTTATCCATCCCATAAATAACAAGAAAGTCATCTGTGACAGACCCCTGCATCTCATTTTTAAGAAGAACACTGTATCCATGAAGCATATTGATCTTCTCTTGGGACCACATCTTTTTCATGACAATAATGAAAATCATGGCATTGGCGAAAAGAGATCAAGTTTTGAACCGGACGAACCACAAATTAATGGGGATGCTGGTTTGAACAAGTACTACAAAACATTGAACTGCTCTCAGGACAAACCAACCTTTGCATCAGTGGTTCCCCATAACATCAATCTCGTTTACTTGAGGAGGAGCTTAGTGGAGGATCTTCTAAAACAACCTGAAAGCTTCGAGGACAAGGTGGTGGGAAGTTTTGTTAAGATCATAGACACAAATTCCAGCCAATTTCAATCTAAAGTGAAAATTTCTCAACAGCTCTTGCAAGTGACAGGTTGA

Protein sequence

MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSSFEPDEPQINGDAGLNKYYKTLNCSQDKPTFASVVPHNINLVYLRRSLVEDLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG*

Homology

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BLAST of CsaV3_3G007310 vs. NCBI nr
Match: KAE8650212.1 (hypothetical protein Csa_010941 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 8.2e-167
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60
           MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC
Sbjct: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60

Query: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKEL 120
           HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKEL
Sbjct: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKEL 120

Query: 121 SPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNN 180
           SPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNN
Sbjct: 121 SPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNN 180

Query: 181 ENHGIGEKRSSFEPDEPQINGDAGLNKYYKTLNCSQDKPTFASVVPHNINLVYLRRSLVE 240
           ENHGIGEKRSSFEPDEPQINGDAGLNKYYKTLNCSQDKPTFASVVPHNINLVYLRRSLVE
Sbjct: 181 ENHGIGEKRSSFEPDEPQINGDAGLNKYYKTLNCSQDKPTFASVVPHNINLVYLRRSLVE 240

Query: 241 DLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG 284
           DLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG
Sbjct: 241 DLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG 283

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BLAST of CsaV3_3G007310 vs. NCBI nr
Match: XP_031737764.1 (zinc finger CCCH domain-containing protein 19 [Cucumis sativus])

HSP 1 Score: 548.1 bits (1411), Expect = 4.4e-152
Identity = 282/391 (72.12%), Postives = 282/391 (72.12%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60
           MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC
Sbjct: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60

Query: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFS--- 120
           HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFS   
Sbjct: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKKA 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VDFEDRDTHECLFKEYWDIVKQEEGLSRHVLVAVEQTRSSKKATRQMKGYIPTPTRLPST 180

Query: 181 ----------------------------------------------KELSPSEVSSIILK 240
                                                         KELSPSEVSSIILK
Sbjct: 181 LQHEHTDSKSKSKSKPKPNNNNTHKFLGWGSKPLIEFLTSFGVDSTKELSPSEVSSIILK 240

Query: 241 YVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSS 283
           YVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSS
Sbjct: 241 YVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSS 300

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BLAST of CsaV3_3G007310 vs. NCBI nr
Match: XP_008437778.1 (PREDICTED: uncharacterized protein At5g08430-like isoform X2 [Cucumis melo])

HSP 1 Score: 493.8 bits (1270), Expect = 9.8e-136
Identity = 257/397 (64.74%), Postives = 269/397 (67.76%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHC--PTTSPIQQEWTC 60
           MEE DSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHC  PTTS IQ++WTC
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTPTTSLIQEDWTC 60

Query: 61  DCHSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFS- 120
           DCH CSSCKEASEFHCFCCPTSFCNNCI+SVKFIHLRP+KGLCSDCWTLVRLAEKLSFS 
Sbjct: 61  DCHHCSSCKEASEFHCFCCPTSFCNNCIESVKFIHLRPSKGLCSDCWTLVRLAEKLSFSK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KAVDFEDRDTHECLFKEYWDIVKQEEGISRHDLVAVEQTRSSNKARSRMKGFIPTPTPTP 180

Query: 181 ----------------------------------------------------KELSPSEV 240
                                                               K+LSPSEV
Sbjct: 181 TPKRLPNTLQHEHTNSKSKSKSKPNNNNTHKFLGWGSKPLIEFLTSFGVDSTKQLSPSEV 240

Query: 241 SSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGI 283
           SSIILKYVQQNDLIHPINNKKVICDR LHLIFKKNT+SMKHIDLLLGPH FHDNNENHGI
Sbjct: 241 SSIILKYVQQNDLIHPINNKKVICDRLLHLIFKKNTISMKHIDLLLGPHFFHDNNENHGI 300

[Close]

BLAST of CsaV3_3G007310 vs. NCBI nr
Match: XP_008437776.1 (PREDICTED: uncharacterized protein At5g08430-like isoform X1 [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 3.3e-131
Identity = 257/425 (60.47%), Postives = 269/425 (63.29%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNG----------------------------NCSKV 60
           MEE DSKAEDWCFVCKDGGDLILCNNG                            NCSKV
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGLSSHSFLMPRPSSHHILCMISSFLFLFSNCSKV 60

Query: 61  YHLECLGLDSDYHC--PTTSPIQQEWTCDCHSCSSCKEASEFHCFCCPTSFCNNCIKSVK 120
           YHLECLGLDSDYHC  PTTS IQ++WTCDCH CSSCKEASEFHCFCCPTSFCNNCI+SVK
Sbjct: 61  YHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCIESVK 120

Query: 121 FIHLRPNKGLCSDCWTLVRLAEKLSFS--------------------------------- 180
           FIHLRP+KGLCSDCWTLVRLAEKLSFS                                 
Sbjct: 121 FIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGISRHD 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LVAVEQTRSSNKARSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNNNTHKF 240

Query: 241 --------------------KELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIF 283
                               K+LSPSEVSSIILKYVQQNDLIHPINNKKVICDR LHLIF
Sbjct: 241 LGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRLLHLIF 300

[Close]

BLAST of CsaV3_3G007310 vs. NCBI nr
Match: XP_038902032.1 (zinc finger CCCH domain-containing protein 44-like isoform X1 [Benincasa hispida])

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-116
Identity = 227/375 (60.53%), Postives = 251/375 (66.93%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHC--PTTSPIQQEWTC 60
           ME  ++KAEDWCFVCKDGGDLILCNNGNCSKVYHL+CLG  SD  C   T   I+++WTC
Sbjct: 1   MEGREAKAEDWCFVCKDGGDLILCNNGNCSKVYHLDCLGFHSDSDCDGETAFQIEEDWTC 60

Query: 61  DCHSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFS- 120
           DCHSCSSC+EASE HCFCCPTSFC NCI+SVKFI LRPNKGLC++CWTLVRLAEKLSFS 
Sbjct: 61  DCHSCSSCEEASEVHCFCCPTSFCKNCIESVKFIPLRPNKGLCTECWTLVRLAEKLSFSK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KAVDFEDRDTHECLFKEYWEIVKEEEGLTRGDLVAVEEACSSKKSRKKMTDTTPTPVAKT 180

Query: 181 -----------------------------KELSPSEVSSIILKYVQQNDLIHPINNKKVI 240
                                        K+LSPSEVSSIILKYVQ+NDLIHPIN KKVI
Sbjct: 181 LQDRDTKKFVGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQENDLIHPINKKKVI 240

Query: 241 CDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHG-IGEKRSSFEPDEPQINGDAGLNK 283
           CD PLHLIFKKNTV+MKHI+LLLGPHLFH N  N+G I +KRS  EPD+PQINGD  LNK
Sbjct: 241 CDGPLHLIFKKNTVAMKHINLLLGPHLFHANEANNGIISKKRSRLEPDQPQINGDVALNK 300

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 103/401 (25.69%), Postives = 151/401 (37.66%), Query Frame = 0


Query: 4   GDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSC 63
           G  K ED CF+C DGGDL+LC+   C+K YH  C+  D  +        + +W C  H C
Sbjct: 594 GKKKEEDVCFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFF-----QTKGKWNCGWHLC 653

Query: 64  SSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKE---- 123
           S C++ + + C+ C  S C  C K   F  +R NKGLC  C   V+L E+    KE    
Sbjct: 654 SKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIERKQQEKEPAQL 713

Query: 124 ------------------------LSPS-------------------------------- 183
                                   LSP                                 
Sbjct: 714 DFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASETDYVTDGG 773

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 774 SDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDETMEWASKELLDLVVHMRRGDRSFLP 833

Query: 244 --EVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVS-MKHIDLLLGPHLFHDNN 268
             EV +++L Y+++ +L  P    +VICD  L  +F K+ V   + ++LL    L  + N
Sbjct: 834 MLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFLKKEQN 893

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 96/414 (23.19%), Postives = 147/414 (35.51%), Query Frame = 0


Query: 5   DSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCS 64
           + K ED CF+C DGGDL+LC+  NC K YH  C+  D  +   T      +W C  H C 
Sbjct: 106 EDKEEDVCFICFDGGDLVLCDRRNCPKAYHPACIKRDEAFFRTTA-----KWNCGWHICG 165

Query: 65  SCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDC-------------------- 124
           +C++AS + C+ C  S C  CIK   ++ +R N GLC  C                    
Sbjct: 166 TCQKASSYMCYTCTFSVCKRCIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNEAVKV 225

Query: 125 ------------------------------------------------------------ 184
                                                                       
Sbjct: 226 DFDDKLSWEYLFKVYWLCLKEELSLTVDELTRANNPWKEVPNTAPKVESQNDHTNNRALD 285

Query: 185 --------------------------------------WTLVRLAEKLSFSKE-----LS 244
                                                 W    L E +SF K      LS
Sbjct: 286 VAVNGTKRRRTSDSPTLPNKLDGKNPSNILKKAPGDTSWATKELLEFVSFMKNGDTSVLS 345

Query: 245 PSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLF----- 284
             +V  ++L Y+++ +L  P+   +V+CD+ L  +F K  V    +  LL  H+      
Sbjct: 346 QFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESHVLIQEKP 405

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 7.8e-19
Identity = 67/172 (38.95%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 117 SKELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLF 176
           S+ +S  +VS  I KY+ +  L+ P N KKV+CD+ L L+F   T+    +  LL  H +
Sbjct: 49  SEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKH-Y 108

Query: 177 HDNNENHGIGEKRSSFE---PDEPQINGDAGLNKYYKTLNCSQDKP--TFASVVPHNINL 236
            +N ++       S F+    DEPQI   +   K  K  +    KP  TFA++V  NI L
Sbjct: 109 KENQDD-------SDFDFLYEDEPQIICHS--EKIAKRTSKVVKKPRGTFAAIVSDNIKL 168

Query: 237 VYLRRSLVEDLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG 284
           +YLR+SLV++LLK P++FE K++GSFV+I    +   Q   K   QL+QVTG
Sbjct: 169 LYLRKSLVQELLKSPDTFEGKMLGSFVRIKSDPNDYLQ---KYPYQLVQVTG 207

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot
Match: Q8BVE8 (Histone-lysine N-methyltransferase NSD2 OS=Mus musculus OX=10090 GN=Nsd2 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 9.3e-12
Identity = 37/101 (36.63%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 3    EGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHS 62
            EG  ++ED CF C DGG L+LC+   C+K YHL CLGL          P   +W C  H 
Sbjct: 1233 EGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGK-------RPF-GKWECPWHH 1292

Query: 63   CSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSD 104
            C  C + S   C  CP SFC        F   +  +  C +
Sbjct: 1293 CDVCGKPSTSFCHLCPNSFCKEHQDGTAFRSTQDGQSYCCE 1325

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot
Match: Q9BZ95 (Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens OX=9606 GN=NSD3 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 32/76 (42.11%), Postives = 41/76 (53.95%), Query Frame = 0


Query: 9    EDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCSSCKE 68
            ED+CF C DGG+L++C+  +C K YHL CL L        T P   +W C  H C  C  
Sbjct: 1321 EDYCFQCGDGGELVMCDKKDCPKAYHLLCLNL--------TQPPYGKWECPWHQCDECSS 1380

Query: 69   ASEFHCFCCPTSFCNN 85
            A+   C  CP SFC +
Sbjct: 1381 AAVSFCEFCPHSFCKD 1388

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL
Match: A0A1S3AVE1 (uncharacterized protein At5g08430-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483110 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.8e-136
Identity = 257/397 (64.74%), Postives = 269/397 (67.76%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHC--PTTSPIQQEWTC 60
           MEE DSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHC  PTTS IQ++WTC
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTPTTSLIQEDWTC 60

Query: 61  DCHSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFS- 120
           DCH CSSCKEASEFHCFCCPTSFCNNCI+SVKFIHLRP+KGLCSDCWTLVRLAEKLSFS 
Sbjct: 61  DCHHCSSCKEASEFHCFCCPTSFCNNCIESVKFIHLRPSKGLCSDCWTLVRLAEKLSFSK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KAVDFEDRDTHECLFKEYWDIVKQEEGISRHDLVAVEQTRSSNKARSRMKGFIPTPTPTP 180

Query: 181 ----------------------------------------------------KELSPSEV 240
                                                               K+LSPSEV
Sbjct: 181 TPKRLPNTLQHEHTNSKSKSKSKPNNNNTHKFLGWGSKPLIEFLTSFGVDSTKQLSPSEV 240

Query: 241 SSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGI 283
           SSIILKYVQQNDLIHPINNKKVICDR LHLIFKKNT+SMKHIDLLLGPH FHDNNENHGI
Sbjct: 241 SSIILKYVQQNDLIHPINNKKVICDRLLHLIFKKNTISMKHIDLLLGPHFFHDNNENHGI 300

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL
Match: A0A1S3AUT2 (uncharacterized protein At5g08430-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483110 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.6e-131
Identity = 257/425 (60.47%), Postives = 269/425 (63.29%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNG----------------------------NCSKV 60
           MEE DSKAEDWCFVCKDGGDLILCNNG                            NCSKV
Sbjct: 1   MEERDSKAEDWCFVCKDGGDLILCNNGLSSHSFLMPRPSSHHILCMISSFLFLFSNCSKV 60

Query: 61  YHLECLGLDSDYHC--PTTSPIQQEWTCDCHSCSSCKEASEFHCFCCPTSFCNNCIKSVK 120
           YHLECLGLDSDYHC  PTTS IQ++WTCDCH CSSCKEASEFHCFCCPTSFCNNCI+SVK
Sbjct: 61  YHLECLGLDSDYHCPTPTTSLIQEDWTCDCHHCSSCKEASEFHCFCCPTSFCNNCIESVK 120

Query: 121 FIHLRPNKGLCSDCWTLVRLAEKLSFS--------------------------------- 180
           FIHLRP+KGLCSDCWTLVRLAEKLSFS                                 
Sbjct: 121 FIHLRPSKGLCSDCWTLVRLAEKLSFSKKAVDFEDRDTHECLFKEYWDIVKQEEGISRHD 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LVAVEQTRSSNKARSRMKGFIPTPTPTPTPKRLPNTLQHEHTNSKSKSKSKPNNNNTHKF 240

Query: 241 --------------------KELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIF 283
                               K+LSPSEVSSIILKYVQQNDLIHPINNKKVICDR LHLIF
Sbjct: 241 LGWGSKPLIEFLTSFGVDSTKQLSPSEVSSIILKYVQQNDLIHPINNKKVICDRLLHLIF 300

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL
Match: A0A6J1ISQ4 (zinc finger CCCH domain-containing protein 44-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 7.7e-94
Identity = 196/382 (51.31%), Postives = 228/382 (59.69%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60
           MEE + KAEDWCFVCKDGGDL+LC+N NCSKVYHLEC+G D +    TTS I+ +WTC+C
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDNRNCSKVYHLECVGYDRE----TTSQIEDDWTCEC 60

Query: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSK-- 120
           HSCSSCK ASE HCFCCPTSFC NCIKSVKF+HLR NKGLC+DCWTLVRLAE+LS S+  
Sbjct: 61  HSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVHLRANKGLCTDCWTLVRLAEQLSVSEYK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLVAVEEPYSSKGRRHMRGTTPTRVVKTLQ 180

Query: 181 ---------------------------------ELSPSEVSSIILKYVQQNDLIHPINNK 240
                                            +LS  +VSSIILKYVQ+ DLIHPI   
Sbjct: 181 DRDTKSNTFKLITSWGSKPLIEFLTSIGVDITTQLSQCDVSSIILKYVQERDLIHPIKKM 240

Query: 241 KVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSSFEPDEPQINGDAGL 283
           K+ICDR LHLIFKKNT+ +  I+ LLGPH  H N+      EK+   E D PQ NGDA  
Sbjct: 241 KIICDRNLHLIFKKNTIPLNQINALLGPHFSHGNDTQRTNNEKKRCLESD-PQ-NGDA-- 300

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL
Match: A0A6J1IYF8 (zinc finger CCCH domain-containing protein 44-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 7.7e-94
Identity = 196/382 (51.31%), Postives = 228/382 (59.69%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60
           MEE + KAEDWCFVCKDGGDL+LC+N NCSKVYHLEC+G D +    TTS I+ +WTC+C
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDNRNCSKVYHLECVGYDRE----TTSQIEDDWTCEC 60

Query: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSK-- 120
           HSCSSCK ASE HCFCCPTSFC NCIKSVKF+HLR NKGLC+DCWTLVRLAE+LS S+  
Sbjct: 61  HSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVHLRANKGLCTDCWTLVRLAEQLSVSEYK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLVAVEEPYSSKGRRHMRGTTPTRVVKTLQ 180

Query: 181 ---------------------------------ELSPSEVSSIILKYVQQNDLIHPINNK 240
                                            +LS  +VSSIILKYVQ+ DLIHPI   
Sbjct: 181 DRDTKSNTFKLITSWGSKPLIEFLTSIGVDITTQLSQCDVSSIILKYVQERDLIHPIKKM 240

Query: 241 KVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSSFEPDEPQINGDAGL 283
           K+ICDR LHLIFKKNT+ +  I+ LLGPH  H N+      EK+   E D PQ NGDA  
Sbjct: 241 KIICDRNLHLIFKKNTIPLNQINALLGPHFSHGNDTQRTNNEKKRCLESD-PQ-NGDA-- 300

[Close]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL
Match: A0A6J1IVC4 (zinc finger CCCH domain-containing protein 44-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479607 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 7.7e-94
Identity = 196/382 (51.31%), Postives = 228/382 (59.69%), Query Frame = 0


Query: 1   MEEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDC 60
           MEE + KAEDWCFVCKDGGDL+LC+N NCSKVYHLEC+G D +    TTS I+ +WTC+C
Sbjct: 1   MEEREGKAEDWCFVCKDGGDLLLCDNRNCSKVYHLECVGYDRE----TTSQIEDDWTCEC 60

Query: 61  HSCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSK-- 120
           HSCSSCK ASE HCFCCPTSFC NCIKSVKF+HLR NKGLC+DCWTLVRLAE+LS S+  
Sbjct: 61  HSCSSCKGASEVHCFCCPTSFCKNCIKSVKFVHLRANKGLCTDCWTLVRLAEQLSVSEYK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 SVDFEDRDTHECLFKEYWEIVKKEEGLRRGDLVAVEEPYSSKGRRHMRGTTPTRVVKTLQ 180

Query: 181 ---------------------------------ELSPSEVSSIILKYVQQNDLIHPINNK 240
                                            +LS  +VSSIILKYVQ+ DLIHPI   
Sbjct: 181 DRDTKSNTFKLITSWGSKPLIEFLTSIGVDITTQLSQCDVSSIILKYVQERDLIHPIKKM 240

Query: 241 KVICDRPLHLIFKKNTVSMKHIDLLLGPHLFHDNNENHGIGEKRSSFEPDEPQINGDAGL 283
           K+ICDR LHLIFKKNT+ +  I+ LLGPH  H N+      EK+   E D PQ NGDA  
Sbjct: 241 KIICDRNLHLIFKKNTIPLNQINALLGPHFSHGNDTQRTNNEKKRCLESD-PQ-NGDA-- 300

[Close]

BLAST of CsaV3_3G007310 vs. TAIR 10
Match: AT5G63700.1 (zinc ion binding;DNA binding )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 107/452 (23.67%), Postives = 157/452 (34.73%), Query Frame = 0


Query: 2   EEGDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCH 61
           EE + + EDWCF+CKDGG+L+LC+  +C KVYH  C+  DS     + S     + C  H
Sbjct: 15  EEDEKECEDWCFICKDGGNLMLCDFKDCPKVYHESCVEKDS-----SASKNGDSYICMWH 74

Query: 62  SCSSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDC----------------- 121
           SC  CK+  +  C CC  + C  C+   +FI L+ +KGLC+ C                 
Sbjct: 75  SCYLCKKTPKLCCLCCSHAVCEGCVTHAEFIQLKGDKGLCNQCQEYVFALEEIQEYDAAG 134

Query: 122 ------------------WTLVRLAEKLSFS----------------------------- 181
                             W + +  E L+F                              
Sbjct: 135 DKLDLTDRNTFECLFLEYWEIAKKQEGLTFDDVRKVCASKPQKKGVKSKYKDDPKFSLGD 194

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 195 VHTSKSQKKGDKLKNKDDPKFALGDAHTSKSGKKGVKLKNKDDPKFLVSDHAVEDAVDYK 254

Query: 242 ------------------------------KELSPSEVSSIILKYVQQNDLIHPINNKKV 284
                                         + +S   V S+I +Y+++ +L+     KKV
Sbjct: 255 KVGKNKRMEFIRWGSKPLIDFLTSIGEDTREAMSQHSVESVIRRYIREKNLLDREKKKKV 314

[Close]

BLAST of CsaV3_3G007310 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding )

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 103/401 (25.69%), Postives = 151/401 (37.66%), Query Frame = 0


Query: 4   GDSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSC 63
           G  K ED CF+C DGGDL+LC+   C+K YH  C+  D  +        + +W C  H C
Sbjct: 594 GKKKEEDVCFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFF-----QTKGKWNCGWHLC 653

Query: 64  SSCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAEKLSFSKE---- 123
           S C++ + + C+ C  S C  C K   F  +R NKGLC  C   V+L E+    KE    
Sbjct: 654 SKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIERKQQEKEPAQL 713

Query: 124 ------------------------LSPS-------------------------------- 183
                                   LSP                                 
Sbjct: 714 DFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASETDYVTDGG 773

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 774 SDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDETMEWASKELLDLVVHMRRGDRSFLP 833

Query: 244 --EVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVS-MKHIDLLLGPHLFHDNN 268
             EV +++L Y+++ +L  P    +VICD  L  +F K+ V   + ++LL    L  + N
Sbjct: 834 MLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFLKKEQN 893

[Close]

BLAST of CsaV3_3G007310 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding )

HSP 1 Score: 108.6 bits (270), Expect = 8.3e-24
Identity = 96/414 (23.19%), Postives = 147/414 (35.51%), Query Frame = 0


Query: 5   DSKAEDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCS 64
           + K ED CF+C DGGDL+LC+  NC K YH  C+  D  +   T      +W C  H C 
Sbjct: 106 EDKEEDVCFICFDGGDLVLCDRRNCPKAYHPACIKRDEAFFRTTA-----KWNCGWHICG 165

Query: 65  SCKEASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDC-------------------- 124
           +C++AS + C+ C  S C  CIK   ++ +R N GLC  C                    
Sbjct: 166 TCQKASSYMCYTCTFSVCKRCIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNEAVKV 225

Query: 125 ------------------------------------------------------------ 184
                                                                       
Sbjct: 226 DFDDKLSWEYLFKVYWLCLKEELSLTVDELTRANNPWKEVPNTAPKVESQNDHTNNRALD 285

Query: 185 --------------------------------------WTLVRLAEKLSFSKE-----LS 244
                                                 W    L E +SF K      LS
Sbjct: 286 VAVNGTKRRRTSDSPTLPNKLDGKNPSNILKKAPGDTSWATKELLEFVSFMKNGDTSVLS 345

Query: 245 PSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLF----- 284
             +V  ++L Y+++ +L  P+   +V+CD+ L  +F K  V    +  LL  H+      
Sbjct: 346 QFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESHVLIQEKP 405

[Close]

BLAST of CsaV3_3G007310 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 95.9 bits (237), Expect = 5.6e-20
Identity = 67/172 (38.95%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 117 SKELSPSEVSSIILKYVQQNDLIHPINNKKVICDRPLHLIFKKNTVSMKHIDLLLGPHLF 176
           S+ +S  +VS  I KY+ +  L+ P N KKV+CD+ L L+F   T+    +  LL  H +
Sbjct: 49  SEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKH-Y 108

Query: 177 HDNNENHGIGEKRSSFE---PDEPQINGDAGLNKYYKTLNCSQDKP--TFASVVPHNINL 236
            +N ++       S F+    DEPQI   +   K  K  +    KP  TFA++V  NI L
Sbjct: 109 KENQDD-------SDFDFLYEDEPQIICHS--EKIAKRTSKVVKKPRGTFAAIVSDNIKL 168

Query: 237 VYLRRSLVEDLLKQPESFEDKVVGSFVKIIDTNSSQFQSKVKISQQLLQVTG 284
           +YLR+SLV++LLK P++FE K++GSFV+I    +   Q   K   QL+QVTG
Sbjct: 169 LYLRKSLVQELLKSPDTFEGKMLGSFVRIKSDPNDYLQ---KYPYQLVQVTG 207

[Close]

BLAST of CsaV3_3G007310 vs. TAIR 10
Match: AT2G18090.1 (PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein )

HSP 1 Score: 88.6 bits (218), Expect = 8.9e-18
Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 9   EDWCFVCKDGGDLILCNNGNCSKVYHLECLGLDSDYHCPTTSPIQQEWTCDCHSCSSCKE 68
           ED CFVC DGG L+LC+   C K YH  C+     +        + +W C  H C++C++
Sbjct: 79  EDVCFVCFDGGSLVLCDRRGCPKAYHPACVKRTEAFF-----RSRSKWNCGWHICTTCQK 138

Query: 69  ASEFHCFCCPTSFCNNCIKSVKFIHLRPNKGLCSDCWTLVRLAE 113
            S + C+ CP S C  C++S +++ +R NKG C  C   + L E
Sbjct: 139 DSFYMCYTCPYSVCKRCVRSSEYVVVRENKGFCGICMKTIMLIE 177

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650212.1	8.2e-167	100.00	hypothetical protein Csa_010941 [Cucumis sativus]	[more]
XP_031737764.1	4.4e-152	72.12	zinc finger CCCH domain-containing protein 19 [Cucumis sativus]	[more]
XP_008437778.1	9.8e-136	64.74	PREDICTED: uncharacterized protein At5g08430-like isoform X2 [Cucumis melo]	[more]
XP_008437776.1	3.3e-131	60.47	PREDICTED: uncharacterized protein At5g08430-like isoform X1 [Cucumis melo]	[more]
XP_038902032.1	1.0e-116	60.53	zinc finger CCCH domain-containing protein 44-like isoform X1 [Benincasa hispida...	[more]

BLAST of CsaV3_3G007310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIV5	1.5e-25	25.69	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SD34	1.2e-22	23.19	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FT92	7.8e-19	38.95	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P...	[more]
Q8BVE8	9.3e-12	36.63	Histone-lysine N-methyltransferase NSD2 OS=Mus musculus OX=10090 GN=Nsd2 PE=1 SV...	[more]
Q9BZ95	1.6e-11	42.11	Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens OX=9606 GN=NSD3 PE=1 SV=...	[more]

BLAST of CsaV3_3G007310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AVE1	4.8e-136	64.74	uncharacterized protein At5g08430-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3AUT2	1.6e-131	60.47	uncharacterized protein At5g08430-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1ISQ4	7.7e-94	51.31	zinc finger CCCH domain-containing protein 44-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1IYF8	7.7e-94	51.31	zinc finger CCCH domain-containing protein 44-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1IVC4	7.7e-94	51.31	zinc finger CCCH domain-containing protein 44-like isoform X2 OS=Cucurbita maxim...	[more]

BLAST of CsaV3_3G007310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63700.1	2.8e-27	23.67	zinc ion binding;DNA binding	[more]
AT2G16485.1	1.0e-26	25.69	nucleic acid binding;zinc ion binding;DNA binding	[more]
AT3G51120.1	8.3e-24	23.19	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding	[more]
AT5G08430.1	5.6e-20	38.95	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT2G18090.1	8.9e-18	36.54	PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 11..62 e-value: 5.3E-4 score: 29.3
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 110..175 e-value: 9.8E-11 score: 41.4
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 99..177 score: 13.430004
IPR004343	Plus-3 domain	PFAM	PF03126	Plus-3	coord: 228..267 e-value: 5.2E-5 score: 23.7
IPR004343	Plus-3 domain	PROSITE	PS51360	PLUS3	coord: 223..283 score: 19.484728
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..104 e-value: 2.1E-20 score: 74.8
IPR036128	Plus3-like superfamily	GENE3D	3.90.70.200		coord: 225..283 e-value: 1.4E-7 score: 33.4
IPR036128	Plus3-like superfamily	SUPERFAMILY	159042	Plus3-like	coord: 225..261
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 105..184 e-value: 8.7E-15 score: 56.3
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 113..177
None	No IPR available	PANTHER	PTHR46851:SF5	ZINC ION BINDING / DNA BINDING PROTEIN	coord: 117..283
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 2..113 coord: 117..283
None	No IPR available	PANTHER	PTHR46851:SF5	ZINC ION BINDING / DNA BINDING PROTEIN	coord: 2..113
None	No IPR available	CDD	cd15568	PHD5_NSD	coord: 11..47 e-value: 2.13432E-14 score: 63.8876
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 108..175 e-value: 1.72485E-8 score: 48.3085
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 12..77
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 5..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007310.1	CsaV3_3G007310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding