CsaV3_3G007180 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G007180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ethylene-responsive transcription factor 13-like
Location	chr3: 6436760 .. 6437955 (-)
RNA-Seq Expression	CsaV3_3G007180
Synteny	CsaV3_3G007180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGAAGTAGAAACCGAGGGAATAGTTATAATATATAAGTTATATAAAATACATTTGTGTGGCACATATGTGTGTGGTGAGGTGAGGTGAGATAGTATAGAATAGAATAGGACAGAATGGAATTGGTATGTTATAATATGATATCAATTTAACCACGTTTTTGTTTCAAGGAAGATGGTGTATATAATTTGGAGGTTGGTTCAGGGAAGCAGCGGAGTAAGGCCTAATTAAGGGGATGGACATATAAAATGAAGAAGAAGGCTCAAGGGATCGGAGAACTGCCAGTGCCCACTGCAAATAATTTAATCAACTGCACCAAATTAGATATATATTAATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCTAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAGCCTGTTACTTCACTTTTTCCCAAGCCTCTGACCCCCATTTCATTTCCCACGTACTTTGCCTGCTTCCCCATCCATTCCAATTATCTACAAACCGACTATTACACACTAATAATATTATATATCAGTTATATAATTTATTTCCGATTTGCATCAGGGTGAGGTGAGGTGAGAGAGTGTTAAATAATATAATCTTAATTTCATGAAGAAATTACATTTACCTAAAAGTTAATATGATCCTTTTTTTTTAATTATTATTATTATAATTTATGTCCTTTCCCTTTCCCTTTCCTTTCTTCTTCTTCTTTCTCTTCTGGATTTATGTCCGATTTGCTCTTTTTAGTTTTTTTAGTTTTTATATCCAATCCAATCCTGCAACGACATTTTACAAACATTCTCTACTTTGGATTCTAAAGAAAAATATGGAG

mRNA sequence

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCTAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG

Coding sequence (CDS)

ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGACTCGATCCGTCAGCATCTTCTGGAAGAGAACTTAAACAAGAGTGGGGATGGGATTTGTAGTATTATTCAGGATCATCATTATAAAGGGGCGGCGGTGGAGAATGGAGTGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATATGCGGCGGAGATAAGAGATCCAAAGAGAAATGGAGCCAGAACGTGGCTGGGGACCTTTGAAACGGCCCTAGAAGCAGCTTTGGCCTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCGAAACTCAACTTTCCACATCTCATTGATTCTGATTCTACACATTCTACTTCTGCTTCTACTTCGTCTGCTAACCCTCCTCCAAGTCCTACCCACGCCCACCATCAAACTTCTGCTGACAACTACGCCTGTTAG

Protein sequence

MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSASTSSANPPPSPTHAHHQTSADNYAC*

Homology

[Close]

BLAST of CsaV3_3G007180 vs. NCBI nr
Match: XP_004134276.1 (ethylene-responsive transcription factor 13 [Cucumis sativus] >KGN56335.1 hypothetical protein Csa_010864 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60

Query: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS
Sbjct: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120

Query: 121 TSSANPPPSPTHAHHQTSADNYAC 145
           TSSANPPPSPTHAHHQTSADNYAC
Sbjct: 121 TSSANPPPSPTHAHHQTSADNYAC 144

[Close]

BLAST of CsaV3_3G007180 vs. NCBI nr
Match: XP_008439349.1 (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo] >KAA0048803.1 ethylene-responsive transcription factor 13-like [Cucumis melo var. makuwa] >TYK20755.1 ethylene-responsive transcription factor 13-like [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 6.7e-56
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKS----GDGICSIIQDHHYKGAAVENGVQFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKS    GDGI SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120
           WGKYAAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120

Query: 121 TSASTSSANPPPSPTHAHH 136
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSTKRPPSPTHADH 136

[Close]

BLAST of CsaV3_3G007180 vs. NCBI nr
Match: XP_038907088.1 (ethylene-responsive transcription factor 13-like [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46
Identity = 111/153 (72.55%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDG-------ICSIIQDHHYKGAAV----ENGV-- 60
           MSSWRESDVL+SIRQHLLEEN +  GDG         +I   HH+K AAV    ENGV  
Sbjct: 1   MSSWRESDVLESIRQHLLEENNSGGGDGDGDGRESSSAISIHHHHKAAAVAAAAENGVQL 60

Query: 61  -QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFP 120
            QFKGVRRRPWGKYA EIRDPKRNGARTWLGTF+TA +AALAYDRAAF+IRGAKAKLNFP
Sbjct: 61  MQFKGVRRRPWGKYAGEIRDPKRNGARTWLGTFDTAQDAALAYDRAAFRIRGAKAKLNFP 120

Query: 121 HLIDSDSTHSTSASTSSANPPPSPTHAHHQTSA 140
           HLIDSDS  STS ST     P SPTHA HQTSA
Sbjct: 121 HLIDSDSIWSTSTSTKR---PRSPTHAQHQTSA 150

[Close]

BLAST of CsaV3_3G007180 vs. NCBI nr
Match: XP_022151925.1 (ethylene-responsive transcription factor 14-like [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-28
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 8   DVLDSIRQHLLEENLNKSGDGICSIIQDHHY---------KGAAVENGV-QFKGVRRRPW 67
           D+L+ IR+HLLEE ++   D   S    +           KG+ +  GV QFKGVRRRPW
Sbjct: 7   DLLEWIREHLLEEKMDPDPDPAASNANANANANSNSEVGGKGSELGVGVQQFKGVRRRPW 66

Query: 68  GKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHST 127
           GKYAAEIRDP R GARTWLGTF TA +AALAYDRAAFK+RGAKAKLNFPHLIDS+S   +
Sbjct: 67  GKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQS 126

Query: 128 SASTSSANPPPSPTH 133
            A  ++   P  PTH
Sbjct: 127 LACNTNKR-PRFPTH 140

[Close]

BLAST of CsaV3_3G007180 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 2   SSWRESDVLDSIRQHLLEENLN------------KSGDGICSIIQDHHYKGAAVENGVQF 61
           SS  E  +L+ IR+HLLE+ L+            KSGDG+  I  +   KG+++  G+QF
Sbjct: 11  SSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDI--EAPGKGSSI-RGLQF 70

Query: 62  KGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLI 112
           +GVRRRPWGKYAAEIRDP R GAR WLGT++TA EAALAYDRAAF++RGAKAKLNFPH+I
Sbjct: 71  RGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMI 129

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 44  ENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKL 103
           + G+Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET  +AA+AYDRAAF++RG+KAKL
Sbjct: 87  QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKL 146

Query: 104 NFPHLIDSDSTHSTSASTSSANPPPS 130
           NFPHLI S             +P PS
Sbjct: 147 NFPHLIGSCKYEPVRIRPRRRSPEPS 172

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAK 100
           A V  G  ++GVR+RPWGK+AAEIRDP +NGAR WLGT+ETA EAALAYD+AA+++RG+K
Sbjct: 95  AVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSK 154

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPS 130
           A LNFPH I  +       +    +P P+
Sbjct: 155 ALLNFPHRIGLNEPEPVRLTVKRRSPEPA 183

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAK 100
           A V  G  ++GVR+RPWGK+AAEIRDP +NGAR WLGT+ETA EAALAYD+AA+++RG+K
Sbjct: 91  AVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSK 150

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPS 130
           A LNFPH I  +       +    +P P+
Sbjct: 151 ALLNFPHRIGLNEPEPVRLTAKRRSPEPA 179

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-21
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 46  GVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNF 105
           G +++GVRRRPWGKYAAEIRD  R+GAR WLGTFETA EAALAYDRAAF++RGAKA LNF
Sbjct: 56  GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 115

Query: 106 PHLIDSDSTHSTSASTSS 124
           P  I + S      S  S
Sbjct: 116 PSEIVNASVSVDKLSLCS 133

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 41  AAVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAK 100
           A +  G  ++GVRRRPWGK+AAEIRDP +NGAR WLGT+ET  EAA+AYD+AA+++RG+K
Sbjct: 97  AELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSK 156

Query: 101 AKLNFPHLIDSDSTHSTSASTSSANPPPSPTHAHHQTS 139
           A LNFPH I  +        T+     P P  +   +S
Sbjct: 157 AHLNFPHRIGLNEPEPVRV-TAKRRASPEPASSSENSS 193

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL
Match: A0A0A0L2V9 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116720 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.8e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60
           MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY
Sbjct: 1   MSSWRESDVLDSIRQHLLEENLNKSGDGICSIIQDHHYKGAAVENGVQFKGVRRRPWGKY 60

Query: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120
           AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS
Sbjct: 61  AAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHSTSAS 120

Query: 121 TSSANPPPSPTHAHHQTSADNYAC 145
           TSSANPPPSPTHAHHQTSADNYAC
Sbjct: 121 TSSANPPPSPTHAHHQTSADNYAC 144

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL
Match: A0A5A7TYW8 (Ethylene-responsive transcription factor 13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00150 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKS----GDGICSIIQDHHYKGAAVENGVQFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKS    GDGI SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120
           WGKYAAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120

Query: 121 TSASTSSANPPPSPTHAHH 136
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSTKRPPSPTHADH 136

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL
Match: A0A1S3AZ89 (ethylene-responsive transcription factor 13-like OS=Cucumis melo OX=3656 GN=LOC103484163 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MSSWRESDVLDSIRQHLLEENLNKS----GDGICSIIQDHHYKGAAVENGVQFKGVRRRP 60
           MSSWRESDVL+SIRQHLL+ENLNKS    GDGI SIIQDHHYK AAVE   +FKGVRRRP
Sbjct: 1   MSSWRESDVLESIRQHLLKENLNKSGDGDGDGIFSIIQDHHYKAAAVE---KFKGVRRRP 60

Query: 61  WGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHS 120
           WGKYAAEIRDPKRNGARTWLGTFETA EAALAYDRAAFKIRGAKAKLNFPHLIDS ST+S
Sbjct: 61  WGKYAAEIRDPKRNGARTWLGTFETAQEAALAYDRAAFKIRGAKAKLNFPHLIDSASTYS 120

Query: 121 TSASTSSANPPPSPTHAHH 136
           TSASTSS   PPSPTHA H
Sbjct: 121 TSASTSSTKRPPSPTHADH 136

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL
Match: A0A6J1DCJ3 (ethylene-responsive transcription factor 14-like OS=Momordica charantia OX=3673 GN=LOC111019776 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 8   DVLDSIRQHLLEENLNKSGDGICSIIQDHHY---------KGAAVENGV-QFKGVRRRPW 67
           D+L+ IR+HLLEE ++   D   S    +           KG+ +  GV QFKGVRRRPW
Sbjct: 7   DLLEWIREHLLEEKMDPDPDPAASNANANANANSNSEVGGKGSELGVGVQQFKGVRRRPW 66

Query: 68  GKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLIDSDSTHST 127
           GKYAAEIRDP R GARTWLGTF TA +AALAYDRAAFK+RGAKAKLNFPHLIDS+S   +
Sbjct: 67  GKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQS 126

Query: 128 SASTSSANPPPSPTH 133
            A  ++   P  PTH
Sbjct: 127 LACNTNKR-PRFPTH 140

[Close]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL
Match: A0A6J1IH30 (ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=LOC111472899 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 2   SSWRESDVLDSIRQHLLEENLN------------KSGDGICSIIQDHHYKGAAVENGVQF 61
           SS  E  +L+ IR+HLLE+ L+            KSGDG+  I  +   KG+++  G+QF
Sbjct: 11  SSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDI--EAPGKGSSI-RGLQF 70

Query: 62  KGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHLI 112
           +GVRRRPWGKYAAEIRDP R GAR WLGT++TA EAALAYDRAAF++RGAKAKLNFPH+I
Sbjct: 71  RGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMI 129

[Close]

BLAST of CsaV3_3G007180 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 44  ENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKL 103
           + G+Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT+ET  +AA+AYDRAAF++RG+KAKL
Sbjct: 87  QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKL 146

Query: 104 NFPHLIDSDSTHSTSASTSSANPPPS 130
           NFPHLI S             +P PS
Sbjct: 147 NFPHLIGSCKYEPVRIRPRRRSPEPS 172

[Close]

BLAST of CsaV3_3G007180 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 46  GVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNF 105
           G  ++GVR+RPWGK+AAEIRDP +NGAR WLGTFETA +AALAYDRAAF++RG++A LNF
Sbjct: 145 GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 204

Query: 106 PHLIDSDS-----THSTSASTSSANPPPSP 131
           P  ++S         S  +S SS+N   +P
Sbjct: 205 PLRVNSGEPDPVRIKSKRSSFSSSNENGAP 234

[Close]

BLAST of CsaV3_3G007180 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 49  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPHL 108
           ++GVR+RPWGK+AAEIRDPK+  AR WLGTFETA EAALAYDRAA K +G KAKLNFP  
Sbjct: 39  YRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPER 98

Query: 109 IDSDSTHST------SASTSSANPPPSP 131
           +   +T +T        S S  +PPP P
Sbjct: 99  VQGPTTTTTISHAPRGVSESMNSPPPRP 125

[Close]

BLAST of CsaV3_3G007180 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 48  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKAKLNFPH 107
           +F+GVRRRPWGK+AAEIRDP RNGAR WLGTFETA EAA AYDRAAF +RG  A LNFP+
Sbjct: 19  RFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPN 78

Query: 108 ----LIDSDSTHSTSASTSSAN 126
                +D  S     AS+SS++
Sbjct: 79  EYYPRMDDYSLRPPYASSSSSS 100

[Close]

BLAST of CsaV3_3G007180 vs. TAIR 10
Match: AT4G17490.1 (ethylene responsive element binding factor 6 )

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 42  AVENGVQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFETALEAALAYDRAAFKIRGAKA 101
           A E    ++GVR RPWGK+AAEIRDP R G R WLGTFETA+EAA AYD+ AF++RG+KA
Sbjct: 130 AAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKA 189

Query: 102 KLNFPHLID 111
            LNFP  +D
Sbjct: 190 ILNFPLEVD 198

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134276.1	1.0e-75	100.00	ethylene-responsive transcription factor 13 [Cucumis sativus] >KGN56335.1 hypoth...	[more]
XP_008439349.1	6.7e-56	86.33	PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo] >KAA0...	[more]
XP_038907088.1	1.7e-46	72.55	ethylene-responsive transcription factor 13-like [Benincasa hispida]	[more]
XP_022151925.1	2.7e-28	58.52	ethylene-responsive transcription factor 14-like [Momordica charantia]	[more]
XP_022974259.1	1.0e-27	59.84	ethylene-responsive transcription factor 13-like [Cucurbita maxima]	[more]

BLAST of CsaV3_3G007180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K1	1.4e-24	62.79	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LW50	3.9e-22	56.18	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q40479	3.9e-22	56.18	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ...	[more]
O04681	5.6e-21	67.95	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
Q40476	2.1e-20	51.02	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]

BLAST of CsaV3_3G007180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2V9	4.8e-76	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116720 PE=...	[more]
A0A5A7TYW8	3.3e-56	86.33	Ethylene-responsive transcription factor 13-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3AZ89	3.3e-56	86.33	ethylene-responsive transcription factor 13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1DCJ3	1.3e-28	58.52	ethylene-responsive transcription factor 14-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1IH30	4.9e-28	59.84	ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CsaV3_3G007180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	1.0e-25	62.79	ethylene-responsive element binding factor 13	[more]
AT4G17500.1	2.0e-21	57.78	ethylene responsive element binding factor 1	[more]
AT5G13330.1	2.0e-21	60.23	related to AP2 6l	[more]
AT3G23230.1	3.4e-21	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT4G17490.1	3.4e-21	65.22	ethylene responsive element binding factor 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 49..60 score: 58.03 coord: 88..108 score: 58.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 48..112 e-value: 2.6E-34 score: 130.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..98 e-value: 1.6E-13 score: 50.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 48..106 score: 22.866192
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 48..108 e-value: 2.90989E-29 score: 99.6534
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 47..107 e-value: 1.7E-27 score: 97.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..144
None	No IPR available	PANTHER	PTHR31190:SF128	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1	coord: 41..124
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 41..124
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 49..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007180.1	CsaV3_3G007180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity