CsaV3_3G006000 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACGATCACACATTGCTTTTAAAACTATGTTACATATAGTCAAACTCTAAAGTAGATAAATGTGGTATTTGAACGTTCACCATAATTTTTCATGTTTTATATTTGTAGATATGGATATGATTTAAGTTAAATTTAAGAGCAATGTTTACGTTCATCCACCTGAGAAACATATTTCCCAAAATTAAAAAAGAAGAAAAAGAAAAAACGTATTTTCTTAGAAAAGAAAAATGCTACATGGAAAGTTTTAATTGGATGGGGGCTCCTAAGGTTTTTCCAATTTAACGTGAAACCGTGCGACGTGGCCAAATTTTGGTACTTGAATCATGAATGGGCAGGCCGAACAGCTACATAATCTTACAACGGATCACCGTGAAGACACAATCGGAGCCCATATATTTTGATTCCTTTTGCCGCCGGACGATAACATGGACGACGTCCTCGGAAACAACCGTTTTCGTTATCTGAAAGATACCTCTCAGCACCGTGACATTCGGACGAAGATTATCCAATTTCTCACCGGCGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGCTCACTCAAGGCCGTCTCCGGTTCTCTTTCTTCTCTCTTGCTTCTAAACATATATCTGTCGATTATTTACAAAGTTTTGGTGCTTTCAATTTTTCAATCACATTAAAAACACTACAGCCCTAATTTCTTCAGCCCTTCAGTTTCTGATCTAGTGTTTTGTTCTATAGCTCTAATATTTTGTATGGATCTTCTTCTGCCGCTCCCCCCTTAATATTCTTTTCGACTCATCCTTCATTTTATCTGAATTATTGGATTTCTTCCCTCCCTGCTGCCCCGAAAGAATGAAAATTTGTTGTGAGTGTATTTCTTTTGTTTTCGATTAGGAATATGCGTGGAAGAAAATTGAAATTTGGATATTGCAATAGCATGTTATAAGTATCATTGTTCTTTATGTGAAGTTCCATTCCAAGTAGTTGATTTTTGCTCGGCCTAAATGTTAAATTTTCCTCCAGCAACTCCAGAACATGTACCAAAATTTGGATTTGCCTTTGTTTTTATCCAGTTTTCCCTATACTGATTCTAGGTGAAACTTTCAAAGTTTATGTTTTTTGTGTGGCAAGTTGATGGAGTTTGAGGAAGATCACTCTGATTGGCCATTGTTTTGCTTTCTGTAGTGGGCCTATTGGGGCTAGAGACCTTGACCATAACTTCTAGACCCTAGAGTGTGATTTAGCCTCTGTTATTGTTCAGAGTTCTTTCTTTAAGGGGTTGCAGTCTTGTAGATCAAGGAGTTTCTTCTTCATTCTCTTTTGAGAGACGAAAAGATTTGTTGGCATGTTGGAATGCTTGCTGCTTTGTAGGGCCTTTAGATGGAGGAATAGCAGTGTCTTTAAGCACTTAGGTTTTTGGGCCGTGGTTAGATCGAAATCTTTTTGTAGGGTTCAACAGATGGCGGGAGAGGTTTTTGTAATAATCTGTTAGGTCCTGTCTTACATGATTGGAAGCTCTTCTTTAGTTTGCCTCTTCTTTCTTTTTTCTTTAATCTCTTGGTTCTTGTCTTACTCGTTTGGAGGCTTTTCTTTAGTTTGCCTTCTTTATTTTGAGCTTGTTTCTGTGTATCTTTGATCCCTCTCATTTCATTTCGGTTAATTCATTTAAAATCCGTTAAGTTTAAAATTACGTTGGATTCTGATATACACTATGAGAATGGAAAAAAGTATGTGATTGTCAATTTTAGATTATGTTCTGGTTGGTTTAGTTTTAAAAGAATTTGGTTACACGTTGGTGTGAAATTGCTTTTGTTAAAAGACTGACCTGAATTGATCTGGTTACACCCCTACTGATTCAAATGAAGAAAATCCATTGCTATACTTACATCTTTTTCTATGGCTTTTCCTTACGTACTGGTACCTTTGTCCAAATAAATGATTAGTCTCCTGGTTTTTTGTGGACGATATCTCTGGAATTCCTCTACTGAATTCTGCCAATAGTATTAAACTCTTTTTGGTTTTTGATTTTTGGTTACTTTCTGGGGTGGTTGAATGATGTAGGTAAGAGTGAGGTGCATAAGATTAGGCAGGGAGGGTTAAAGGATACGCCCTATTCATCATCTTTGAATGAAAAGAAACCAGAAGAGGTTAAACTAGTGATGAAACCAGAAGAGGTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAAAAGAGGGAAACGTGAATAAAATGAAGCAACAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATGACTCTGAACCACTGAAGAAGAAGCAGGGGGAAGGCGACAAAGGATCAGCCAACGTAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTATAGACACAATCCAGTTCATTATTATTGTATTGTAGCATAATAGTAAGAATAATGGATTCCTTTCTTGACAGGGTACGTAAGTTGTACTTAGATGGAGACTTTTATTATATTATCATAATTTGTAAAGCTATGCATCCAATATTTTCATGGATGGAATTCCTTAGCTTAGCAAGTTGTAAACAAATTCCTCTCTTGTTGGAAACAAAATAGAAGTTGATTAATAGCATTTTGTTTTTGGCAGGATTAGTATATTGACTACACGGGTTATCCTAATATGACTTTTTTTTTTATTAAAAAGAATGTATTAGGTGTATAAATGTGTAATTTGTTGTTTCCCCTTTTAACAAATGGAAAAAG ATGGACGACGTCCTCGGAAACAACCGTTTTCGTTATCTGAAAGATACCTCTCAGCACCGTGACATTCGGACGAAGATTATCCAATTTCTCACCGGCGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGCTCACTCAAGGCCGTCTCCGGTAAGAGTGAGGTGCATAAGATTAGGCAGGGAGGGTTAAAGGATACGCCCTATTCATCATCTTTGAATGAAAAGAAACCAGAAGAGGTTAAACTAGTGATGAAACCAGAAGAGGTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAAAAGAGGGAAACGTGAATAAAATGAAGCAACAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATGACTCTGAACCACTGAAGAAGAAGCAGGGGGAAGGCGACAAAGGATCAGCCAACGTAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTATAG ATGGACGACGTCCTCGGAAACAACCGTTTTCGTTATCTGAAAGATACCTCTCAGCACCGTGACATTCGGACGAAGATTATCCAATTTCTCACCGGCGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGCTCACTCAAGGCCGTCTCCGGTAAGAGTGAGGTGCATAAGATTAGGCAGGGAGGGTTAAAGGATACGCCCTATTCATCATCTTTGAATGAAAAGAAACCAGAAGAGGTTAAACTAGTGATGAAACCAGAAGAGGTTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAAAAGAGGGAAACGTGAATAAAATGAAGCAACAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATGACTCTGAACCACTGAAGAAGAAGCAGGGGGAAGGCGACAAAGGATCAGCCAACGTAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTATAG MDDVLGNNRFRYLKDTSQHRDIRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKSEVHKIRQGGLKDTPYSSSLNEKKPEEVKLVMKPEEVKLVMDKMQAEMEEKEGNVNKMKQQQHHCTSAEIVDDDSEPLKKKQGEGDKGSANVIQNKKRIFIRSRL* Homology
BLAST of CsaV3_3G006000 vs. NCBI nr
Match: XP_004149292.2 (uncharacterized protein LOC101206320 [Cucumis sativus] >KGN56212.1 hypothetical protein Csa_010884 [Cucumis sativus]) HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. NCBI nr
Match: KAA0046872.1 (uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa] >TYK03274.1 uncharacterized protein E5676_scaffold298G001010 [Cucumis melo var. makuwa]) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61 Identity = 132/157 (84.08%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. NCBI nr
Match: XP_008452286.1 (PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61 Identity = 132/157 (84.08%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. NCBI nr
Match: XP_038905013.1 (uncharacterized protein LOC120091185 [Benincasa hispida]) HSP 1 Score: 211.5 bits (537), Expect = 5.4e-51 Identity = 118/157 (75.16%), Postives = 129/157 (82.17%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. NCBI nr
Match: KAG6577390.1 (hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015467.1 hypothetical protein SDJN02_23103, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47 Identity = 114/157 (72.61%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. ExPASy TrEMBL
Match: A0A0A0L6J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099730 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 8.7e-79 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. ExPASy TrEMBL
Match: A0A5D3BVT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001010 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62 Identity = 132/157 (84.08%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. ExPASy TrEMBL
Match: A0A1S3BUM3 (uncharacterized protein LOC103493357 OS=Cucumis melo OX=3656 GN=LOC103493357 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62 Identity = 132/157 (84.08%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. ExPASy TrEMBL
Match: A0A6J1CP03 (uncharacterized protein LOC111012775 OS=Momordica charantia OX=3673 GN=LOC111012775 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 5.5e-41 Identity = 109/159 (68.55%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of CsaV3_3G006000 vs. ExPASy TrEMBL
Match: A0A7N2M8R1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 5.9e-19 Identity = 67/157 (42.68%), Postives = 95/157 (60.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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