CsaV3_3G005070 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G005070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	2-iminobutanoate/2-iminopropanoate deaminase-like
Location	chr3: 4232682 .. 4235148 (-)
RNA-Seq Expression	CsaV3_3G005070
Synteny	CsaV3_3G005070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGAAAAAAAACAAAGAAAAAGAGAAAGGGTGGTGGGGTGGTCCTCCTAAACCTCAATAAAAAGGTGCGTAAATGAAGCAATGAGATTCATTGGACGGACTAAAACTATAGTGTGGGAGGAAGAAATCTAGAAGTAAAAAAGGAGAAGTCGCAGATGGCTATGTCCGCAGCTCACACCCTCCAAATTCCGGCCTCCACCGCCATTACACGGAGGCGATCCATCACTCCCTCTGCCAGCACCGCCGTGTCCTTGTGGAGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTACTGGTATTAATACGTCCCCTCATTCTCTTTGACCTATTTGGCTTCATCAATTTTCCTTTTTAAATCTTATTTTAAAGAAATTATTTATCCATTATTATGTTAAATAGCATTTTTTATAAAAGAAAAATATAAACAACCTATTTTGATTAAAAAAAAAATGGTTATTGAATTCCTCTAAGACAACATAAAAAAAACGGAAAAAAAATAAAGTTAGTTAAAAAAGAAAAAAATAAAAAAAAATACATCTATCATACACAAGAAAATAAATAGTTGAGATGTTGAAAAGATGCATTTTAATAAAAACAAATGAATTAGGGAATTTTCCACGACTTTTAACAACTATCTCTATTAGTACGACACTATTTTGATGTGGTATCAAAAGCAAAACTATATGGGTGTATGTTTAAAGTAAAAATTATCGCGTGAAGACATGTAAAGGTCTTCTGTCCTTACCAAATCCAAATGATTTTAGTACTTTTAAACATTTTTTAGAGAAAAATATCTTTAGTTTCAAAATTTTGACGAATATGTGCTTTTAGTGCCTGAGTTTTCAAAAGTGAAATAATTGTAAATGACAAAAATATTAAAAGTATCTACAAAAATGTAGGAAAAAATTTCAAATCTGATCCATCGATAGACCTTGAATAGATACAAAAATTTGTTATATATTATAAATATTTGTTAGTTTATTTGACTAGGTTTAAAATGTCCTTTTTATATATCTTTTTAGTTTTTAAATTTATAAAAATAGATTTGAAATAATAACCCATTTTAAATTGTAATATTAACTTTGATCTACACAAATCACTCAACAAAAAAATTAGATCTTAAATGAAACGTAACAAATTTAAGGTAAAATTTATATTTTTTTCCCCTAAAGATTATCCCACCACTTAATACCAATGTTTGTTTTGTGGCAGAAATCATAGGCATTGCAACTGACAATGCCCCAGAAGCATTGGGGCCCTATTCTCAGGGAATCATAGCCAACAATCTTGTATATGTATCTGGCTCCCTTGGTCTAATTCCTGAGGTACTGTTTTTCAATGTTTAACATAAACATAGCTCAGTTGATCAGTTGGGTTTCAATTATTTGTCATGAGTTCGCGCTGGACACGTATAATTGAGTATGTTTTTTGGTTTGATGCAGACAGGGCAATTGATCTCAGATGATGTTGGAGAGCAAACTGAGCAGGTTATTGTTATTTTTTTTTGTTTAAAAAGAAAGAAAAATTAAATTTTGTTAGCATTAATTTCTGAGGAAATGAAATATTATTATGCAGGCCCTAAAAAATGTTGGTGCAATATTAAGAGCTGGAGGGGCTGATTATGATAGAGTGATTAAGACAACTATTATGTATGAAATCTTGAGTTGCAATCATTTTGCATCTATAGCCATCTTTTATCCCATGTTTTGGAAAATTGTACTCTCGCAGCTTTCGTTTCAAGAATTAGTCATTTGTTTGTTCTTCTCATTTTGTTTTTGGCAGGTTGGCTAATGTAGCAGATTTTACATTAGTAAATGAGATTTATGGAAAATGTAAGTTCTTTTCAAATGAATCATTTCAAAAGATCAAGAACGTGGCATTTAAAGTTGTAAGTTGTTTGTTTTTTGACAGATTTTCCAAACTGCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGCTTTGAATTGGAAGTTTATATTAATATAGTTTTTGAAGGCAACATTATCATCATAAATTTAAATAAGTTGGAGCGTTGGAGATATATAGCTTATGAAAGGGAACATATTCACCAAATTTACTATTTGGTTTGTGTATTATTACCTTAGCTAGGCTTTATCTTGTTACCAACGTTTTATTATTGTAATAACTTTATATTTTCACTATCATATGCATTTAAGCTGTGGAAGTGAAAATAAAGAGGTAATGGAAGATAGTGTTGTCTTGGTTATATGAAGAGCTTTTCTCAATGCTACAATGCCTTAAATTACTACTTTTATTCAAATGTTTTGGTTAACGGTGTTGATTTGATTGCATGCATTTTCGGATCTTTGTAAGATCAAGTGTTAAAGTCTAGAAGAGCTCTTGAAGTGTGGGGG

mRNA sequence

ATGGCTATGTCCGCAGCTCACACCCTCCAAATTCCGGCCTCCACCGCCATTACACGGAGGCGATCCATCACTCCCTCTGCCAGCACCGCCGTGTCCTTGTGGAGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTACTGAAATCATAGGCATTGCAACTGACAATGCCCCAGAAGCATTGGGGCCCTATTCTCAGGGAATCATAGCCAACAATCTTGTATATGTATCTGGCTCCCTTGGTCTAATTCCTGAGACAGGGCAATTGATCTCAGATGATGTTGGAGAGCAAACTGAGCAGGCCCTAAAAAATGTTGGTGCAATATTAAGAGCTGGAGGGGCTGATTATGATAGAGTGATTAAGACAACTATTATGTTGGCTAATGTAGCAGATTTTACATTAGTAAATGAGATTTATGGAAAATATTTTCCAAACTGCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGCTTTGA

Coding sequence (CDS)

ATGGCTATGTCCGCAGCTCACACCCTCCAAATTCCGGCCTCCACCGCCATTACACGGAGGCGATCCATCACTCCCTCTGCCAGCACCGCCGTGTCCTTGTGGAGGCGGCCTTCACCGGCCATTCCATCTATTTCAAGCCGTCAAATGTCCTTCAAATGCCATGCCATTTCCAAGTGTACTACTGAAATCATAGGCATTGCAACTGACAATGCCCCAGAAGCATTGGGGCCCTATTCTCAGGGAATCATAGCCAACAATCTTGTATATGTATCTGGCTCCCTTGGTCTAATTCCTGAGACAGGGCAATTGATCTCAGATGATGTTGGAGAGCAAACTGAGCAGGCCCTAAAAAATGTTGGTGCAATATTAAGAGCTGGAGGGGCTGATTATGATAGAGTGATTAAGACAACTATTATGTTGGCTAATGTAGCAGATTTTACATTAGTAAATGAGATTTATGGAAAATATTTTCCAAACTGCCCTGCACCAGCAAGATCAACATTTGCAGCTGGAGCATTACCCAAAAATGCTAAGATTGAAATTGATGCAATAGCTGTGCTTTGA

Protein sequence

MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCTTEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVGAILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIEIDAIAVL*

Homology

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BLAST of CsaV3_3G005070 vs. NCBI nr
Match: KGN56122.1 (hypothetical protein Csa_010346 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 5.0e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

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BLAST of CsaV3_3G005070 vs. NCBI nr
Match: NP_001267661.1 (chordin [Cucumis sativus] >ABA18632.1 plastid-lipid associated protein [Cucumis sativus] >ABA18633.1 plastid-lipid associated protein [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 8.1e-94
Identity = 184/187 (98.40%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITRRRSITPSA TAVSLWRRPSPAIPSISS QMSFKCHAISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

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BLAST of CsaV3_3G005070 vs. NCBI nr
Match: XP_008463411.1 (PREDICTED: ribonuclease UK114-like [Cucumis melo] >TYK02559.1 ribonuclease UK114-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 335.1 bits (858), Expect = 3.9e-88
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITR RS TPSA TAVSLWRRP PAIPSISSRQMSFKC AISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEI GIATDNAPEALGPYSQGIIANN++YVSGSLGLIP+TG+LISDDVGEQTEQALKNVG
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

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BLAST of CsaV3_3G005070 vs. NCBI nr
Match: XP_038905772.1 (LOW QUALITY PROTEIN: 2-iminobutanoate/2-iminopropanoate deaminase-like, partial [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 146/186 (78.49%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 2   AMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCTT 61
           A SAAH  QIPAS  I+RRRS+TPS  TAV L  RPS +IPSIS RQMSFKC AISK  T
Sbjct: 7   ASSAAHNFQIPASNTISRRRSVTPSVGTAVFLRLRPS-SIPSISRRQMSFKCFAISKSCT 66

Query: 62  EIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVGA 121
           +II I T  APEALGPYS+GIIANN+VYVSGSLGL+PETG+LISDD+ +QTEQALKNVGA
Sbjct: 67  DIIVIETXKAPEALGPYSEGIIANNVVYVSGSLGLVPETGELISDDIADQTEQALKNVGA 126

Query: 122 ILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIEI 181
           ILRAGGADYDRV+KTTIMLAN+ADFTLVN+IY KYFP+ PAP+RSTF AGALPKNAKI+I
Sbjct: 127 ILRAGGADYDRVVKTTIMLANIADFTLVNQIYAKYFPHSPAPSRSTFQAGALPKNAKIKI 186

Query: 182 DAIAVL 188
           DAIAV+
Sbjct: 187 DAIAVI 191

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BLAST of CsaV3_3G005070 vs. NCBI nr
Match: XP_023552960.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 3.6e-70
Identity = 143/187 (76.47%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MA   AHT QIPAS  I+R R++TPS   AVSLWRRPS +IPSIS+R MSFKCHAIS+C 
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISEC- 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
            +I  IAT+ APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VG+QTEQALKN+G
Sbjct: 61  DDITPIATEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALKNIG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AIL+AGG DY+RV+KTTIMLA+VADF LVNEIY KYF   PAPARSTF AGALPKNAKIE
Sbjct: 121 AILKAGGVDYNRVVKTTIMLADVADFALVNEIYAKYFSEYPAPARSTFQAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAV+
Sbjct: 181 IDAIAVV 185

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BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.1e-40
Identity = 95/188 (50.53%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSI-TPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKC 60
           M  S   ++  P     T  RS  TP  +  V        ++  +SSR   F   ++S  
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 61  TTEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNV 120
           + +   ++T+ AP ALGPYSQ I ANNLV++SG LGLIPETG+ +S+ V +QTEQ LKN+
Sbjct: 61  SVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNM 120

Query: 121 GAILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKI 180
           G IL+A GADY  V+KTTIMLA++ADF  VNEIY KYFP  P+PARST+   ALP NAKI
Sbjct: 121 GEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFP-APSPARSTYQVAALPLNAKI 180

Query: 181 EIDAIAVL 188
           EI+ IA L
Sbjct: 181 EIECIATL 187

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 140.2 bits (352), Expect = 2.4e-32
Identity = 70/129 (54.26%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 58  KCTTEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALK 117
           K T +II  A  NAP A+GPYSQ + A N +Y+SGSLGL P+TG L  + V EQT Q+LK
Sbjct: 38  KVTRQIISSA--NAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDL-KEGVVEQTHQSLK 97

Query: 118 NVGAILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNA 177
           N+G +L+A GADY  V+KTT++L N+ADF  VNE+YG+YF + P PAR+ +   ALPK  
Sbjct: 98  NLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKS-PYPARAAYQVAALPKGG 157

Query: 178 KIEIDAIAV 187
            +EI+A+A+
Sbjct: 158 LVEIEAVAI 162

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-30
Identity = 59/121 (48.76%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 66  IATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVGAILRA 125
           I+T  AP A+GPYSQ ++ +  +Y+SG +G+ P +GQL+S  V E+ +QALKN+G IL+A
Sbjct: 9   ISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKA 68

Query: 126 GGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIEIDAIA 185
            G D+  V+KTT++LA++ DF  VNEIY +YF +   PAR+ +   ALPK ++IEI+A+A
Sbjct: 69  AGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKS-NFPARAAYQVAALPKGSRIEIEAVA 128

Query: 186 V 187
           +
Sbjct: 129 I 128

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BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 66  IATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVGAILRA 125
           I+T  AP A+G YSQ ++ +  +YVSG +G+ P +GQL+   V E+ +QALKN+G IL+A
Sbjct: 9   ISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKA 68

Query: 126 GGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIEIDAIA 185
            G D+  V+KTT++LA++ DF  VNEIY  YF     PAR+ +   ALPK ++IEI+AIA
Sbjct: 69  AGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQG-NLPARAAYQVAALPKGSRIEIEAIA 128

Query: 186 V 187
           V
Sbjct: 129 V 128

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BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot
Match: Q3T114 (2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 3.6e-28
Identity = 56/121 (46.28%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 66  IATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVGAILRA 125
           I+T  AP A+GPYSQ ++ +  +Y+SG LG+ P +GQL+   V E+ +QAL N+G IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKA 68

Query: 126 GGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIEIDAIA 185
            G D+  V+K T++LA++ DF+ VN++Y +YF +   PAR+ +   ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSTVNDVYKQYFQS-SFPARAAYQVAALPKGGRVEIEAIA 128

Query: 186 V 187
           V
Sbjct: 129 V 128

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL
Match: A0A0A0L6A5 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL
Match: A0RZC7 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.9e-94
Identity = 184/187 (98.40%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITRRRSITPSA TAVSLWRRPSPAIPSISS QMSFKCHAISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL
Match: A0A5D3BWQ5 (Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00100 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITR RS TPSA TAVSLWRRP PAIPSISSRQMSFKC AISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEI GIATDNAPEALGPYSQGIIANN++YVSGSLGLIP+TG+LISDDVGEQTEQALKNVG
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL
Match: A0A1S3CJ80 (ribonuclease UK114-like OS=Cucumis melo OX=3656 GN=LOC103501582 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 174/187 (93.05%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MAMSAAHTLQIPASTAITR RS TPSA TAVSLWRRP PAIPSISSRQMSFKC AISKCT
Sbjct: 1   MAMSAAHTLQIPASTAITRGRSFTPSAGTAVSLWRRPLPAIPSISSRQMSFKCLAISKCT 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
           TEI GIATDNAPEALGPYSQGIIANN++YVSGSLGLIP+TG+LISDDVGEQTEQALKNVG
Sbjct: 61  TEIKGIATDNAPEALGPYSQGIIANNILYVSGSLGLIPKTGELISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AILRAGGADYDRV+KTTIMLANVADFTLVNEIY KYFPN PAPARSTFAAGALPKNAKIE
Sbjct: 121 AILRAGGADYDRVVKTTIMLANVADFTLVNEIYAKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAVL
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL
Match: A0A6J1JD57 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN=LOC111483310 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.7e-70
Identity = 142/187 (75.94%), Postives = 160/187 (85.56%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60
           MA   AHT QIPAS  I+R R++TPS   AVSLWRRPS +IPSIS+R MSFKCHAISKC 
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKC- 60

Query: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120
            +I  I T+ APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VGEQ EQALKN+G
Sbjct: 61  DDITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIG 120

Query: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180
           AIL+AGGADY+RV+KTTIMLA+VADF LVN+IY +YF   PAPARSTF AGALPKNAKIE
Sbjct: 121 AILKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIE 180

Query: 181 IDAIAVL 188
           IDAIAV+
Sbjct: 181 IDAIAVV 185

[Close]

BLAST of CsaV3_3G005070 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-41
Identity = 95/188 (50.53%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 1   MAMSAAHTLQIPASTAITRRRSI-TPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKC 60
           M  S   ++  P     T  RS  TP  +  V        ++  +SSR   F   ++S  
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPPFASLSVSAS 60

Query: 61  TTEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNV 120
           + +   ++T+ AP ALGPYSQ I ANNLV++SG LGLIPETG+ +S+ V +QTEQ LKN+
Sbjct: 61  SVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNM 120

Query: 121 GAILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKI 180
           G IL+A GADY  V+KTTIMLA++ADF  VNEIY KYFP  P+PARST+   ALP NAKI
Sbjct: 121 GEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFP-APSPARSTYQVAALPLNAKI 180

Query: 181 EIDAIAVL 188
           EI+ IA L
Sbjct: 181 EIECIATL 187

The following BLAST results are available for this feature:

BLAST of CsaV3_3G005070 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56122.1	5.0e-96	100.00	hypothetical protein Csa_010346 [Cucumis sativus]	[more]
NP_001267661.1	8.1e-94	98.40	chordin [Cucumis sativus] >ABA18632.1 plastid-lipid associated protein [Cucumis ...	[more]
XP_008463411.1	3.9e-88	93.05	PREDICTED: ribonuclease UK114-like [Cucumis melo] >TYK02559.1 ribonuclease UK114...	[more]
XP_038905772.1	1.1e-71	78.49	LOW QUALITY PROTEIN: 2-iminobutanoate/2-iminopropanoate deaminase-like, partial ...	[more]
XP_023552960.1	3.6e-70	76.47	2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G005070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	4.1e-40	50.53	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q10121	2.4e-32	54.26	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52758	8.5e-30	48.76	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
P52759	1.6e-28	49.59	2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri...	[more]
Q3T114	3.6e-28	46.28	2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 ...	[more]

BLAST of CsaV3_3G005070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A5	2.4e-96	100.00	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3...	[more]
A0RZC7	3.9e-94	98.40	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1	[more]
A0A5D3BWQ5	1.9e-88	93.05	Ribonuclease UK114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CJ80	1.9e-88	93.05	ribonuclease UK114-like OS=Cucumis melo OX=3656 GN=LOC103501582 PE=3 SV=1	[more]
A0A6J1JD57	8.7e-70	75.94	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CsaV3_3G005070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	2.9e-41	50.53	endoribonuclease L-PSP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 69..186 e-value: 8.6E-38 score: 129.1
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 66..187
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 66..186 e-value: 3.8E-44 score: 147.9
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 62..186 e-value: 3.7E-43 score: 148.6
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 63..187
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 66..187
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 78..185 e-value: 4.42824E-43 score: 137.69
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 163..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G005070.1	CsaV3_3G005070.1	mRNA