CsaV3_3G004810 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G004810
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	GrpE protein homolog
Location	chr3: 4054879 .. 4059641 (-)
RNA-Seq Expression	CsaV3_3G004810
Synteny	CsaV3_3G004810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGTTTTGATGTTATTTTGAGTTAGGTGACGTATATGTAAATCAACACAACCTCTTCCTCAAGCAACTACAACGACGTCGTTTACTCAAACAAAAGTAACGGGGTAGTTTCGTCAATTCCCCTTAAAGCCACCGCAAAACCCTCTTCTTCTTCTTCCTTCCTTCCTTCCTTCCTCCCTCGTCTTCTTCTTCTCCTCAACCACATTTCTCTTTGTTCCTTTCCCTTCCTTCGCCTGGACAAACCTTTATCCCATCTTCCTCTCCGCCTTTTCTTCACCTTTATCATTGTTAGCCATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGTTCGATTTAAACACCTGCTACTTACTCCGTTTTGTTTTCTGCTACGAGGGTTTAGCTAGGGTTTTGGGACTTTCTCAAAATTTCTAACGTGACTGCAATTTAGTTATTCGAATTCCTTCCATTTTTATAAAGTTTATATGATTTTAGTTGCCTTTTAATTCTTTTCTGTTGTTGTAAGCATTTGGGACCTCCCCCATCTTAGTTCCTTTTCTGGGTGTCTTGGATTTAATATTGTTGATCAACTTTGGTGTATTTTTTAATATATTTTCTTAAATTGGAGAGCGTTTATAATTCTTTTTCTATTCAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGGTTTCATATCCGGATGTTGATATTTGATGCATGTATTTGATGGAGTACTAACAACTCTGATTTCTGTTTCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGGTTTTGATTTAAGTTTGGCCCATCTATGGTCTCTGACATTTGTTATCATGCTGCAATGACATGGGGGAATGCATTAATATTCACTTACAAGACTCTCTCCTGACATCCATCATTTGTATGTATTTTAGAACTTTGCAAAGAGTTTGCTGGACATTTGCAATGACATGGGAATGCCTATCTATGGTCTTTAACATTTGTTATCATGTTGCAATGACATGGGGGAATGCATTAATATTCACTTACAAGACTCTCTCCTGACATCAATCATTTATATGTATTGTAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTTAGTATCTCATGCACAAATTGTTCTTGAGGTTTGCTGTTCACTTGAATCTGTTTTTATTACATTAATAATTGGATGATTTAAGTGGTGAAGTTCCTCAAATTTTATGAAAGAAGAACCCATGTCAATTTGTTTAGGTTGTTGGCATCTCATGTATTTTATATTTCAATTTCTAAGTTGTATGATTGGGTAAAATGGTGAGAATTTTGATCCCGTCGAACTTGTAAGTTCTATGTGAAGAATTAGCCAATTGAAGCCATCTGCTGCATTACTATAAATTTAAAATATTAAATTCAACTTAACTAATTGGTCAATGGGTATCTCCGTCTGATTTTGACTCTCCATGGCATATATGTGGCAGTGAAGTTCAACTAAATTTTGTTGCTTGCAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGGTATTTCCTGTGGCCCTAATCATTGTTTTCTACATTTTACTATTATGGTATTTCAAATTCTTCATACACCTTTAGTTTGCATATGAAGTTCGTGTGTGGCAAATTTTAGGGTAGACAAAGTTTACGTTCTCATAAATAATTAAACAGTAATTTTGTGAGCTTTTTCTTTGATCAATTAATTTTTCTCAAGAGCCATCAGGCAAGGGTTAATTTGTAGCTCTAGCACAAGAGAATTGGTTGTATCTATAACTTGTAAGTTGTCTGAATATCTTTGTTTCCTATACATTTAGATGTGGGTACAAAATCTTAGGAGATATTCATAGCAAATATGGATGTCTTCGTTTGTTTCTACAATTTTGAAAATCTGGTGTAAATTATAAATGTTTGTTTTTATTTTTGGTGATCATTATGGCCTGACTTCGAGTAGAAGAAAAAGCTATGAACTCAAATGTTACAAGGGTGTTTTAGCTCACAATTGTATTAACCATGGATTTGTATAGCATAAAATGGGGACTATAAGCTTGGGTAGCCATTGTTTTGGTTGTATAGGGAGTATAAAATTGGGGAGCACTAGCTTCTATTTGGTTGCATAAAAGAATGAATCACCTAATCTTCAGATCAGGTAGCTTCTATTTGATTAATGGGGTTTGTTGGGGGGAAATAACTACGTAGCATGAGCATACTGTTTTAAAAGTTTTAGATTTAAGTGGTTTGTGTGTTATCAAGTATGTAGCCTTGTATTTTTTGAAGTGGTTAGCGCACTAAAGCATGAAGTGCAAAAATAGGTGAGGTTTCTTTAGTGAATAGCTGAAATGTATAAAGAATTTTTTATATAAGAGAAAATATAATATGTTGAATAGTAGGATAATGAAACATCTATGAAATTAATGTTTTATAGGAGATTGTTCTGAGAACTTATGGTGTCTGGACCACTCCTGGTTCTTTCGTAAGGGGAGATAGCCTTCATTTCAGCTTGTTTTCTGAGGGGTGAAATTAGATAACGAGACATTGCCATTTAATCTATTTTTCTGAAATTCGTTCTGAGCTTCTGGTCTCTACACTAGGAGTGCTGCTCAAGCTTAAGGGAACAAGAATGGATCTTACATTTAATGAGAATAAATTCTTAAAGAAATAGTTAAAAACATTCTTAGTGGTGCTCATCTACTATATTAGTACCAAATGAACAAATCGCCTATTGTATGACCTTTTTTAAATCCAATCGCTGTAGCAAGAATAAATTGCAAATGATATAAGAAAAATAGGCCAGGATAATAACTTGACATTCTTAATCTATTAGCATTATGAAAAAATGGCTTCAAAACCCAAAAAAGAATAACAGTTAGGAAAGGGAATTAAATCCTTGATGTTTCTTGAGATCTGCATTGGGGGGGGGGGGGGGGGGGGGTGATGCTATGGGCCAGAAATGTTTGGGAAAAGTTTCCGGAGGTAGAAGAAAAACTCAGTAAATGAAAAGCTTCTCTCAGAGTTTGCCATTGAGATGTGCGATGCTTTCTATAGCTCAATACCAGATTTATAAAGAACTTGTTGAGAAAAGAAAGTATTAATCACAGTATTGATTTTTTAGTTAATGGTTACTGAATTAGACCGGATGTAATGTAATGTATATTTTGAAATATCAAGTTAAAAGTAAAACTGTTCGCACACCTCTATAAGTGAGGTGATCATATATGTGCATGTACTAATATTTTATTAGAGTTATCTAGTCCTTAAACAGAAGAAGACCGGGTAACGGTATCTTTGCATTCCACAAGTTTTAATAGCGTGGGCTTGTTACCCTAGCGGGGGCAAAGTCAAACACAATAACTAAACATGTATGATATAACATTATACTTGCATCTGTTTGTCTTGTTGAAGCAGAGCTAATGTTAGAATTTGCATCAAAGCTATGATAACTGCAAACCCCTAACTGTTATTTTGTTGTTTATGTCAATAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGAATTTGAAGGATTGGAAGGATGGATATTTTGGTATAAAAAGAGAAGTTTTGCTATACGGAATCTTCTATGGAAGAGGAGATGCCTAATCTAGACTTGTTAGATTGGACAGGGAAAGAAAAACAATTCATTGCTTGGATAAAATTTGATTTCGTTATGTATTTACAGAGAGATATGAGAGTATTTCCATGATTTCCTGTCAGCTCAAATTCAGAATATGCAAACACTTTCTTTGAGGCATTTTTTTTGTCAAAAAGTTAACAAAGGGCTTTCTGTCAAAGATGAACAGAAACAGAATGATGCCTACATTTTAACAGCAGGAGCAATTTATAATCTATACTAAATATAAATAGATGTTGCTGGGGATTTACTTTATTTTTGTTTACATTTTGTCTTCCATTTTTTTAGATCCCATTTAATCTTTTACTTATTCTTGGACCAAATGAGATTCTCATACTTAGATTTATGTATGTTTGAGGGTCTAATTTTTATACTGGTATAAACATGGTGTAATTGAAGGTATAATTACAGCTATTGTTATA

mRNA sequence

ATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGA

Coding sequence (CDS)

ATGTTCGTCACGAAGCTTTTCTCACGCTCCTCCCGCACCATTCTTCGCAGCTCGCTGCTCTCGTCGGCCCCTCAATCCGACAAACCCATTCACTTCCCAATTCTCACTAATCGATTGCACTCTCTTGCTAACCAATCAAAAGACAAGGAATCAACGTTATATCGTTCATTTTTTCTTCAAAAACATGGATTATCAACATCTGCATCCCCTGAGACTTCTAATAAGGAAAATGGCAATACAGTTCCAAGGAATGGGGGCTCTAAAACTAATGCAGAGCCAACGGCTGAAACTAATGGTCGAACCGGAGAATCAGATTCTGATAGCGATGACAATCTTTCCATGGATGATCTGGTGAAAGTTGTAGCTGAGAAGGAAGAGCTTTTGAAGGTAAAGCACAAAGAGATTGAACAAATGCAAGATAAGGTTATTCGCACTTACGCAGAGATGGAGAATGTGATGGCCAGGACAAAGCGTGAAGCTGAGAATTCGAAGAAGTTTGCTATACAGAACTTTGCAAAGAGTTTGCTGGACGTTGCAGACAATCTAGGACGAGCTTCATCCGTAGTCAAGGGAAGTTTCTCAAAGATTGATTCAACTAATGACTCTTCAGGGGCAGTACCCTTACTGAAAACACTTATTGACGGTGTTGAAATGACGGAGAAACAGCTGTCTGAGGTGTTAAAGAAGTATGGAGTGGAAATGTTTGATCCTACAAATGAGCCATTTGATCCACATAGGCACAATGCAGTTTTTCAAGTACCAGATGGTTCTAAGGCACCTGGTACTGTTGCAGCTGTATTGAAGAAAGGGTACATGCTTCATGAGCGAGTACTTCGACCTGCCGAAGTTGGTGTTACAAAAGCCGTGGAGAATGAGGATGGTGCAACGGGTGACGCAACCGAGAAGGGATCTCAAGGTTGA

Protein sequence

MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDATEKGSQG*

Homology

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_004149344.1 (grpE protein homolog 2, mitochondrial [Cucumis sativus] >KGN56097.1 hypothetical protein Csa_010236 [Cucumis sativus])

HSP 1 Score: 575.1 bits (1481), Expect = 3.6e-160
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV
Sbjct: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

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BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_008449136.1 (PREDICTED: protein GrpE-like isoform X1 [Cucumis melo] >KAA0055848.1 protein GrpE-like isoform X1 [Cucumis melo var. makuwa] >TYK24072.1 protein GrpE-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 285/306 (93.14%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETNGRT ESDS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_008449137.1 (PREDICTED: protein GrpE-like isoform X2 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 3.1e-143
Identity = 280/306 (91.50%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETN      DS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETN------DSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 300

[Close]

BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_038903423.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 492.3 bits (1266), Expect = 3.1e-135
Identity = 263/306 (85.95%), Postives = 284/306 (92.81%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSR+I RSSLLSSA QSDK IH PILTNRLH LAN+S +K+S L+ SFFLQ
Sbjct: 1   MFVTKLFSRSSRSIFRSSLLSSASQSDKTIHLPILTNRLHYLANESTNKKSALHHSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTS SPETSNKENGNTVP NGGS T+AEP AETNG+T ESD +SDDNL+MDDLVKV
Sbjct: 61  KFGLSTSPSPETSNKENGNTVPSNGGSTTDAEPKAETNGQTQESDIESDDNLTMDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLK+KH+EIEQMQDKV+RTYAEMENVMART+REAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VAEKEELLKLKHREIEQMQDKVVRTYAEMENVMARTRREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDST DS+GAVPLLKTL++GVEMTEKQLSEVLKK+GVE+FDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTKDSAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSK PGTVA VLKKGYML+ERVLRPAEVGVT A+ENED AT DAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKPPGTVAIVLKKGYMLYERVLRPAEVGVTTAMENEDDATDDAT 300

Query: 301 EKGSQG 307
           +KGSQG
Sbjct: 301 KKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. NCBI nr
Match: XP_022949288.1 (grpE protein homolog 2, mitochondrial-like isoform X3 [Cucurbita moschata] >KAG6596942.1 GrpE protein-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459.1 bits (1180), Expect = 2.9e-125
Identity = 246/296 (83.11%), Postives = 271/296 (91.55%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHF-PILTNRLHSLANQSKDKESTLYRSFFL 60
           M VTKLFSR+SR+I RSSLLSSA QS++  HF PIL+NR H LAN+S +KES LY SFFL
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKESALYNSFFL 60

Query: 61  QKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVK 120
            K GLST ASPET +KENG++V  NG S   AEPTAE+NG+T ESDS+SDDNL+MDDLVK
Sbjct: 61  HKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVK 120

Query: 121 VVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVA 180
           VVAEKEELLK+KHKEIEQMQDKV+RTYAEMEN+MART+REAENSKKFAIQNFAK LLDVA
Sbjct: 121 VVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVA 180

Query: 181 DNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTN 240
           DNLGRASSVVK SFSKIDSTND++GAVPLLKTL++GVEMTEKQLSEVLKK+GVE+FDPTN
Sbjct: 181 DNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTN 240

Query: 241 EPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGA 296
           EPFDPHRHNAVFQVPDGSK PGTVAAVLKKGYMLHERVLRPAEVGVT+AVENEDGA
Sbjct: 241 EPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENEDGA 296

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.4e-77
Identity = 179/327 (54.74%), Postives = 226/327 (69.11%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDK----ESTLYR 60
           M V ++ SR +R   +RSSL  SA         P+ ++R HSLA+    K    + ++  
Sbjct: 1   MLVLRILSRVTRNAGIRSSL--SAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMD 60

Query: 61  SFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAE-PTAETN---------------- 120
           SF LQ+   S+S SPE+  K+          SKT+ E PTAE N                
Sbjct: 61  SFALQRFNFSSSTSPESDEKKT-----HTEASKTSEEKPTAEANQPGLDSESKDSVTDSA 120

Query: 121 -----------GRTGESDSDSDDN-LSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTY 180
                        + ESDS+SDD+ LS DDLVK+VAEKEELL  K +EI+Q++DKV+RTY
Sbjct: 121 KRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTY 180

Query: 181 AEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAV 240
           AEMENVM RT+R+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK SFSK+D++ DS+GA 
Sbjct: 181 AEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAA 240

Query: 241 PLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAV 294
           PLLKTL++GVEMTEKQL+EV KK+G+E +DP NEPFDP+RHNAVFQVPD SK  GTVA V
Sbjct: 241 PLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHV 300

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.8e-70
Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSF-- 60
           M V+++ SR SR+  LRSS   S+  + K    PI+ +R HSL + + +K   +  S   
Sbjct: 1   MLVSRVLSRVSRSAGLRSSF--SSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  -------FLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDD 120
                   LQ+ G  +S+S E    E+   VP+ G +  N E      G+  +++ D DD
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGETSENVEV-----GKATDAEIDFDD 120

Query: 121 NLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQN 180
            LS DDLVK+V+EKE+LLKV+ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+QN
Sbjct: 121 -LSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQN 180

Query: 181 FAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKY 240
           FA SLLDVADNL RASSVVK SFSKID++ D +GA PLLK L++GVEMTEKQL+EV +K 
Sbjct: 181 FATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKA 240

Query: 241 GVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVE 300
           G+   DP NEPF+P+RHNAVFQVPD SK  GT+A VLK GY L++RV+RPAEVGVT AVE
Sbjct: 241 GLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVE 300

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-30
Identity = 72/164 (43.90%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 124 KEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLG 183
           +++ L   +K++ + +D+ +RT AEMEN+  RT RE  +++ + I  FA+ +L++ADNL 
Sbjct: 33  EDDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQ 92

Query: 184 RASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFD 243
           RA   V          +  +   P LK LI+GVE+TE+ L   L+K+GV+ FDP  E FD
Sbjct: 93  RALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFD 152

Query: 244 PHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           P+ H A+++VPD S   GTVA V++ GYM+ ERVLRPA VGV K
Sbjct: 153 PNVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPALVGVAK 188

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 133 KEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGS 192
           KE  + +DK++RT AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAVPAE 101

Query: 193 FSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQ 252
                  N  +G    LK+LI+GVE+TE+ L   L+K GV+ FDPT + FDP+   A+++
Sbjct: 102 ----TRANADAG----LKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 253 VPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           VPD S   GTV  V++ G+M+ ERVLRPA VGV+K
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot
Match: Q07US4 (Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=grpE PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 133 KEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGS 192
           KE  + +DK++RT AEMEN+  RT RE  +++ + +  FA+ +L++ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALDAV--- 101

Query: 193 FSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQ 252
                     + A P LK LIDGVE+TE+ L   L+K GV+ FDP+ + FDP+   A+++
Sbjct: 102 -----PAEARANAEPGLKALIDGVELTERSLINALEKNGVKKFDPSGQKFDPNFQQAMYE 161

Query: 253 VPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTK 288
           VPD S   GTV  V++ G+ML ERVLRPA VGV+K
Sbjct: 162 VPDASVPAGTVVQVVQAGFMLGERVLRPALVGVSK 188

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL
Match: A0A0A0L683 (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G073880 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.8e-160
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV
Sbjct: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL
Match: A0A5A7UL93 (GrpE protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00420 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.9e-148
Identity = 285/306 (93.14%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETNGRT ESDS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL
Match: A0A1S3BKR7 (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.9e-148
Identity = 285/306 (93.14%), Postives = 294/306 (96.08%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETNGRT ESDS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETNGRTRESDSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 306

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL
Match: A0A1S3BLD9 (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 280/306 (91.50%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSFFLQ 60
           MFVTKLFSRSSRTILRSSLLSSA QSDKPIH PIL NR HSLANQS  KESTL+RSFFLQ
Sbjct: 1   MFVTKLFSRSSRTILRSSLLSSAAQSDKPIHLPILANRFHSLANQSNHKESTLHRSFFLQ 60

Query: 61  KHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVKV 120
           K GLSTSASPETSNKENGN+ P NG SKT+AEPTAETN      DS+SDDNLS+DDLVKV
Sbjct: 61  KFGLSTSASPETSNKENGNSAPSNGSSKTDAEPTAETN------DSESDDNLSIDDLVKV 120

Query: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVAD 180
           VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFA+QNFAKSLLDVAD
Sbjct: 121 VAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAVQNFAKSLLDVAD 180

Query: 181 NLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNE 240
           NLGRASSVVK SFSKIDSTNDS+GAVPLLKTL++GVEMTEKQLSEVLKKYGVEMFDPTNE
Sbjct: 181 NLGRASSVVKESFSKIDSTNDSAGAVPLLKTLLEGVEMTEKQLSEVLKKYGVEMFDPTNE 240

Query: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300
           PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT
Sbjct: 241 PFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDAT 300

Query: 301 EKGSQG 307
           EKGSQG
Sbjct: 301 EKGSQG 300

[Close]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL
Match: A0A6J1GBL5 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-125
Identity = 246/296 (83.11%), Postives = 271/296 (91.55%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTILRSSLLSSAPQSDKPIHF-PILTNRLHSLANQSKDKESTLYRSFFL 60
           M VTKLFSR+SR+I RSSLLSSA QS++  HF PIL+NR H LAN+S +KES LY SFFL
Sbjct: 1   MIVTKLFSRASRSICRSSLLSSASQSNQTAHFSPILSNRFHCLANESINKESALYNSFFL 60

Query: 61  QKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDDNLSMDDLVK 120
            K GLST ASPET +KENG++V  NG S   AEPTAE+NG+T ESDS+SDDNL+MDDLVK
Sbjct: 61  HKFGLSTFASPETPDKENGDSVRSNGSSSAAAEPTAESNGQTKESDSESDDNLTMDDLVK 120

Query: 121 VVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVA 180
           VVAEKEELLK+KHKEIEQMQDKV+RTYAEMEN+MART+REAENSKKFAIQNFAK LLDVA
Sbjct: 121 VVAEKEELLKLKHKEIEQMQDKVVRTYAEMENIMARTRREAENSKKFAIQNFAKGLLDVA 180

Query: 181 DNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTN 240
           DNLGRASSVVK SFSKIDSTND++GAVPLLKTL++GVEMTEKQLSEVLKK+GVE+FDPTN
Sbjct: 181 DNLGRASSVVKESFSKIDSTNDTAGAVPLLKTLLEGVEMTEKQLSEVLKKFGVEIFDPTN 240

Query: 241 EPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGA 296
           EPFDPHRHNAVFQVPDGSK PGTVAAVLKKGYMLHERVLRPAEVGVT+AVENEDGA
Sbjct: 241 EPFDPHRHNAVFQVPDGSKPPGTVAAVLKKGYMLHERVLRPAEVGVTRAVENEDGA 296

[Close]

BLAST of CsaV3_3G004810 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 291.2 bits (744), Expect = 9.8e-79
Identity = 179/327 (54.74%), Postives = 226/327 (69.11%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDK----ESTLYR 60
           M V ++ SR +R   +RSSL  SA         P+ ++R HSLA+    K    + ++  
Sbjct: 1   MLVLRILSRVTRNAGIRSSL--SAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMD 60

Query: 61  SFFLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAE-PTAETN---------------- 120
           SF LQ+   S+S SPE+  K+          SKT+ E PTAE N                
Sbjct: 61  SFALQRFNFSSSTSPESDEKKT-----HTEASKTSEEKPTAEANQPGLDSESKDSVTDSA 120

Query: 121 -----------GRTGESDSDSDDN-LSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTY 180
                        + ESDS+SDD+ LS DDLVK+VAEKEELL  K +EI+Q++DKV+RTY
Sbjct: 121 KRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTY 180

Query: 181 AEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAV 240
           AEMENVM RT+R+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK SFSK+D++ DS+GA 
Sbjct: 181 AEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAA 240

Query: 241 PLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAV 294
           PLLKTL++GVEMTEKQL+EV KK+G+E +DP NEPFDP+RHNAVFQVPD SK  GTVA V
Sbjct: 241 PLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHV 300

[Close]

BLAST of CsaV3_3G004810 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-71
Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 0


Query: 1   MFVTKLFSRSSRTI-LRSSLLSSAPQSDKPIHFPILTNRLHSLANQSKDKESTLYRSF-- 60
           M V+++ SR SR+  LRSS   S+  + K    PI+ +R HSL + + +K   +  S   
Sbjct: 1   MLVSRVLSRVSRSAGLRSSF--SSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRN 60

Query: 61  -------FLQKHGLSTSASPETSNKENGNTVPRNGGSKTNAEPTAETNGRTGESDSDSDD 120
                   LQ+ G  +S+S E    E+   VP+ G +  N E      G+  +++ D DD
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNESNTEVPKTGETSENVEV-----GKATDAEIDFDD 120

Query: 121 NLSMDDLVKVVAEKEELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQN 180
            LS DDLVK+V+EKE+LLKV+ K+I +M+DK +RTYAE +N+M RT R AE++KKFA+QN
Sbjct: 121 -LSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQN 180

Query: 181 FAKSLLDVADNLGRASSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKY 240
           FA SLLDVADNL RASSVVK SFSKID++ D +GA PLLK L++GVEMTEKQL+EV +K 
Sbjct: 181 FATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKA 240

Query: 241 GVEMFDPTNEPFDPHRHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVE 300
           G+   DP NEPF+P+RHNAVFQVPD SK  GT+A VLK GY L++RV+RPAEVGVT AVE
Sbjct: 241 GLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVE 300

[Close]

BLAST of CsaV3_3G004810 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-07
Identity = 64/241 (26.56%), Postives = 102/241 (42.32%), Query Frame = 0


Query: 67  SASPETSNKENGNTVPRNGGSKTNAEPTAETN-GRTGESDSDSDDNLSMDDLVKVVAEKE 126
           +AS E    E           K+  E  A+ N G+  E ++      S++D   ++A+K 
Sbjct: 94  NASAEEGEAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLK---SIEDEKFLLADKV 153

Query: 127 ELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRA 186
             L     E+   +D++IR  A+ +N   RT+RE  N    A     ++LL V DN  RA
Sbjct: 154 ASLS---NELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERA 213

Query: 187 SSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPH 246
            S +K      +   +S  ++              KQ  E+L   GV   +   + FDP 
Sbjct: 214 KSQIKVETEGEEKVTNSYQSI-------------YKQFVEILGSLGVIHVETVGKQFDPM 273

Query: 247 RHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDATEKGSQ 306
            H A+ +        G V    +KG++L ER+LRP+ V V+     E     +  E  +Q
Sbjct: 274 LHEAIMREDSAEYEEGIVLEEYRKGFLLGERLLRPSMVKVSAGPGPEKPLEAEGEEATAQ 315

[Close]

BLAST of CsaV3_3G004810 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-07
Identity = 64/241 (26.56%), Postives = 102/241 (42.32%), Query Frame = 0


Query: 67  SASPETSNKENGNTVPRNGGSKTNAEPTAETN-GRTGESDSDSDDNLSMDDLVKVVAEKE 126
           +AS E    E           K+  E  A+ N G+  E ++      S++D   ++A+K 
Sbjct: 96  NASAEEGEAEEEEAAVITALLKSYKEALADNNEGKIAEIEASLK---SIEDEKFLLADKV 155

Query: 127 ELLKVKHKEIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRA 186
             L     E+   +D++IR  A+ +N   RT+RE  N    A     ++LL V DN  RA
Sbjct: 156 ASLS---NELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERA 215

Query: 187 SSVVKGSFSKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPH 246
            S +K      +   +S  ++              KQ  E+L   GV   +   + FDP 
Sbjct: 216 KSQIKVETEGEEKVTNSYQSI-------------YKQFVEILGSLGVIHVETVGKQFDPM 275

Query: 247 RHNAVFQVPDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENEDGATGDATEKGSQ 306
            H A+ +        G V    +KG++L ER+LRP+ V V+     E     +  E  +Q
Sbjct: 276 LHEAIMREDSAEYEEGIVLEEYRKGFLLGERLLRPSMVKVSAGPGPEKPLEAEGEEATAQ 317

[Close]

BLAST of CsaV3_3G004810 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 41/159 (25.79%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 134 EIEQMQDKVIRTYAEMENVMARTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKGSF 193
           +I   ++  IR  A+ +N   +  ++  +++  A     KSLL + D+  +A   V    
Sbjct: 121 KIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQV---- 180

Query: 194 SKIDSTNDSSGAVPLLKTLIDGVEMTEKQLSEVLKKYGVEMFDPTNEPFDPHRHNAVFQV 253
            ++D+  +       + T   G+    +Q  EVL+   V +     +PFDP  H A+ + 
Sbjct: 181 -RVDTDKEKK-----IDTSYQGI---YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISRE 240

Query: 254 PDGSKAPGTVAAVLKKGYMLHERVLRPAEVGVTKAVENE 293
              +   G +   L KG++L +RVLRPA+V V+    N+
Sbjct: 241 ESEAVKAGIITEELNKGFVLGDRVLRPAKVKVSLGPVNK 266

The following BLAST results are available for this feature:

BLAST of CsaV3_3G004810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149344.1	3.6e-160	100.00	grpE protein homolog 2, mitochondrial [Cucumis sativus] >KGN56097.1 hypothetical...	[more]
XP_008449136.1	1.2e-147	93.14	PREDICTED: protein GrpE-like isoform X1 [Cucumis melo] >KAA0055848.1 protein Grp...	[more]
XP_008449137.1	3.1e-143	91.50	PREDICTED: protein GrpE-like isoform X2 [Cucumis melo]	[more]
XP_038903423.1	3.1e-135	85.95	grpE protein homolog 2, mitochondrial-like [Benincasa hispida]	[more]
XP_022949288.1	2.9e-125	83.11	grpE protein homolog 2, mitochondrial-like isoform X3 [Cucurbita moschata] >KAG6...	[more]

BLAST of CsaV3_3G004810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	1.4e-77	54.74	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	2.8e-70	52.75	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
Q3SW78	3.7e-30	43.90	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
A4YJR1	1.2e-28	46.45	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
Q07US4	1.2e-28	45.81	Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=grpE PE=...	[more]

BLAST of CsaV3_3G004810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L683	1.8e-160	100.00	GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G073880 PE=3 SV=1	[more]
A0A5A7UL93	5.9e-148	93.14	GrpE protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943...	[more]
A0A1S3BKR7	5.9e-148	93.14	GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1	[more]
A0A1S3BLD9	1.5e-143	91.50	GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103491087 PE=3 SV=1	[more]
A0A6J1GBL5	1.4e-125	83.11	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452675 PE=3 SV=1	[more]

BLAST of CsaV3_3G004810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	9.8e-79	54.74	Co-chaperone GrpE family protein	[more]
AT5G55200.1	2.0e-71	52.75	Co-chaperone GrpE family protein	[more]
AT5G17710.1	5.8e-07	26.56	Co-chaperone GrpE family protein	[more]
AT5G17710.2	5.8e-07	26.56	Co-chaperone GrpE family protein	[more]
AT1G36390.1	1.3e-06	25.79	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..112
None	No IPR available	PANTHER	PTHR21237:SF35	GRPE PROTEIN HOMOLOG	coord: 2..289
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 239..254 score: 47.07 coord: 143..159 score: 38.05 coord: 266..285 score: 53.12
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 122..287 e-value: 1.2E-49 score: 168.1
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 2..289
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 242..285
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 73..287 score: 18.737616
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 136..285 e-value: 1.00372E-60 score: 188.099
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 116..230 e-value: 7.4E-29 score: 101.7
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 122..231
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 231..287 e-value: 2.2E-22 score: 80.7
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 232..287
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 105..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G004810.1	CsaV3_3G004810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity