CsaV3_3G003210 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G003210
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin-protein ligase RNF181-like protein
Location	chr3: 2688192 .. 2689443 (-)
RNA-Seq Expression	CsaV3_3G003210
Synteny	CsaV3_3G003210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAATAGTTGAAAGAAATGAGTGTCATTAATAATTAGATAATAATGTACATCAAACAATAATCAGACAACAATGAAATTGTAATCAATATCTTGATTAAATGTTAGGTTATAGACTTAATTTTCATATTATATTTTGCCACAAATCTAAATACCCATTTTAAAAAATACCAATATACTAAAATTATTTACAAAATATATTCTATCCCTTAAAACACTCTATTTTTTTCAATTAAGCTACACCCTAAATAATAAAAAATTACATATTATGAAAAGATATTATGTTTGATAAAGAAAGAAAAGCAAAAGAATAAAATATTTCATAAGATATCCTAACCTTCAAATAACTTTCATAAACAAAACTGAATCAAATTAAGAAACATTAAAAATCTATAAATAAATATATTCCCAACTTTCTTCTTCATCAATTCACATTCACAACAATGCCTCTAGAGAGTGCTTCAACTTTTCGTTACAGTATTCGTCGACGTTGCGGCGTTGAACAATCCCTCCAAATCCGATTAGGACGTATAGTACGTTTACTTTCCGGATCACCTTCCGCCGGACTTCCATACGAGATCCTCCAGGAAAGTGCCTCAATTCCAGTCCACGAGGCTACATTCCCTCTCCCTCTACGAGACGTCGAAGATTCATGCCTTTGCGAAATTTACATCCTTCAATTGCTTTCATCCTTCAACCTCGGCACCGTGACCTCTGGAATCATCTCTAAGAAGATCACGTCGATGGTCGTTGAAGTATTGGGTGCGGGAGACTACGATGCGAAGTTCGAGATGGTGGCAGAAATCGATCATATCCGAATGTACTTCTGGACGGAGGAGGAGGAGCGGAGTTGGGTTGGGAGAGGGAATAATAGTGAGAGGCGTGGAGTTGTGGTGGAGGAGAGGGTGGTTCTAGAGGGAGTTCCGGGGAGGAGAAGGGCGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAAAAGGGTGGGTTTGATGAGAGAAGAGAGTTGGGGGATTGTAGTGTTTGTCAGGAAGAACTGAAGGATGTGAGGAAGGAGGTGAGTAGAATCAGGTGTGGCCATGTGTATCATAAATCCTGTATTCTCACTTGGGTTCAAATGAGAAATTCTTGTCCTTTGTGTAGAAGGGAAGTAGTATTTGAAATTTAAGTGATTATCCAATATTGTAATTTAATTCATTCATTGTTATCAAAATGTTCATAAGTAACATTCATACTTCCTTAATTCA

mRNA sequence

ATGCCTCTAGAGAGTGCTTCAACTTTTCGTTACAGTATTCGTCGACGTTGCGGCGTTGAACAATCCCTCCAAATCCGATTAGGACGTATAGTACGTTTACTTTCCGGATCACCTTCCGCCGGACTTCCATACGAGATCCTCCAGGAAAGTGCCTCAATTCCAGTCCACGAGGCTACATTCCCTCTCCCTCTACGAGACGTCGAAGATTCATGCCTTTGCGAAATTTACATCCTTCAATTGCTTTCATCCTTCAACCTCGGCACCGTGACCTCTGGAATCATCTCTAAGAAGATCACGTCGATGGTCGTTGAAGTATTGGGTGCGGGAGACTACGATGCGAAGTTCGAGATGGTGGCAGAAATCGATCATATCCGAATGTACTTCTGGACGGAGGAGGAGGAGCGGAGTTGGGTTGGGAGAGGGAATAATAGTGAGAGGCGTGGAGTTGTGGTGGAGGAGAGGGTGGTTCTAGAGGGAGTTCCGGGGAGGAGAAGGGCGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAAAAGGGTGGGTTTGATGAGAGAAGAGAGTTGGGGGATTGTAGTGTTTGTCAGGAAGAACTGAAGGATGTGAGGAAGGAGGTGAGTAGAATCAGGTGTGGCCATGTGTATCATAAATCCTGTATTCTCACTTGGGTTCAAATGAGAAATTCTTGTCCTTTGTGTAGAAGGGAAGTAGTATTTGAAATTTAA

Coding sequence (CDS)

ATGCCTCTAGAGAGTGCTTCAACTTTTCGTTACAGTATTCGTCGACGTTGCGGCGTTGAACAATCCCTCCAAATCCGATTAGGACGTATAGTACGTTTACTTTCCGGATCACCTTCCGCCGGACTTCCATACGAGATCCTCCAGGAAAGTGCCTCAATTCCAGTCCACGAGGCTACATTCCCTCTCCCTCTACGAGACGTCGAAGATTCATGCCTTTGCGAAATTTACATCCTTCAATTGCTTTCATCCTTCAACCTCGGCACCGTGACCTCTGGAATCATCTCTAAGAAGATCACGTCGATGGTCGTTGAAGTATTGGGTGCGGGAGACTACGATGCGAAGTTCGAGATGGTGGCAGAAATCGATCATATCCGAATGTACTTCTGGACGGAGGAGGAGGAGCGGAGTTGGGTTGGGAGAGGGAATAATAGTGAGAGGCGTGGAGTTGTGGTGGAGGAGAGGGTGGTTCTAGAGGGAGTTCCGGGGAGGAGAAGGGCGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAAAAGGGTGGGTTTGATGAGAGAAGAGAGTTGGGGGATTGTAGTGTTTGTCAGGAAGAACTGAAGGATGTGAGGAAGGAGGTGAGTAGAATCAGGTGTGGCCATGTGTATCATAAATCCTGTATTCTCACTTGGGTTCAAATGAGAAATTCTTGTCCTTTGTGTAGAAGGGAAGTAGTATTTGAAATTTAA

Protein sequence

MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATFPLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAEIDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKKGGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFEI*

Homology

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BLAST of CsaV3_3G003210 vs. NCBI nr
Match: KAE8650076.1 (hypothetical protein Csa_011336 [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180
           IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK
Sbjct: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180

Query: 181 GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFE 240
           GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFE
Sbjct: 181 GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFE 240

Query: 241 I 242
           I
Sbjct: 241 I 241

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BLAST of CsaV3_3G003210 vs. NCBI nr
Match: TYK19474.1 (E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-74
Identity = 156/204 (76.47%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCG-VEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEAT 60
           M L+ ASTFRYSIRR+ G ++QSLQIRLGR+V LLS  PSAGLPYEIL+E++SI + EAT
Sbjct: 1   MTLDGASTFRYSIRRKEGSIQQSLQIRLGRVVSLLSRPPSAGLPYEILKETSSISIQEAT 60

Query: 61  FPLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVA 120
           FPLPLRD+EDSCLCEIYI+QLLSSFNLGTVTSGIIS+KITSMVVEVL AGDYD KF++VA
Sbjct: 61  FPLPLRDLEDSCLCEIYIVQLLSSFNLGTVTSGIISRKITSMVVEVLAAGDYDTKFQIVA 120

Query: 121 EIDHIRMYFWTEEEERSWVGRGNNSE--RRGVVVEERVVLEGVPGRRRAGERERERERER 180
           EIDHI+MYFW EEEERSWVGRGNN+   RRGVVVEERVVLEGVP RRRA         ER
Sbjct: 121 EIDHIQMYFWGEEEERSWVGRGNNNSGIRRGVVVEERVVLEGVPARRRAA-------AER 180

Query: 181 EKKGGFDER-RELGDCSVCQEELK 201
           E+KGGFDER  +LGDC VC+EEL+
Sbjct: 181 EEKGGFDERGDQLGDCCVCREELR 197

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BLAST of CsaV3_3G003210 vs. NCBI nr
Match: XP_038876865.1 (putative RING-H2 finger protein ATL53 [Benincasa hispida])

HSP 1 Score: 288.9 bits (738), Expect = 4.1e-74
Identity = 157/243 (64.61%), Postives = 182/243 (74.90%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           M LE+ASTFRYS+RR  GV+QSL IRLG + RLLS SPS+GLPYEIL E  S    E TF
Sbjct: 1   MSLETASTFRYSLRRNDGVDQSLHIRLGFLWRLLSRSPSSGLPYEILYEIPSSSPRETTF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PL LRD+ED   CE YI QLL S +LG VT  I+++KITS+VVEVL +G+YD KF++ AE
Sbjct: 61  PLSLRDLEDPLFCEAYIAQLLHSLDLGAVTCDIVARKITSVVVEVLESGNYDVKFQIAAE 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180
           IDH++M FW EEE  S      N ERRG+VVEER VLE  P RRRA ERE +R +  +  
Sbjct: 121 IDHVQM-FWAEEERSS--VPVENGERRGIVVEERAVLEEAPARRRAAERESKRLKMEK-- 180

Query: 181 GGFDE--RRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVV 240
             FDE  R E+GDC VC EEL DVRKEVSRIRCGH+YHKSCILTW+Q RNSCPLCRRE+ 
Sbjct: 181 --FDELKRAEMGDCCVCYEELNDVRKEVSRIRCGHIYHKSCILTWLQSRNSCPLCRREIE 236

Query: 241 FEI 242
           FEI
Sbjct: 241 FEI 236

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BLAST of CsaV3_3G003210 vs. NCBI nr
Match: XP_038905732.1 (E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-57
Identity = 136/236 (57.63%), Postives = 164/236 (69.49%), Query Frame = 0


Query: 3   LESASTFRYSIRRR-CGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATFP 62
           L++ASTFR+S+RR     +QSL IRLG + R LS SPSAGLPYEIL ES SIP+    FP
Sbjct: 4   LQTASTFRFSLRRHDDSDDQSLLIRLGFMHRQLSRSPSAGLPYEILHESNSIPMRINMFP 63

Query: 63  LPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAEI 122
           LPLRD+ED  LC +Y+L+LLS  +L  V   II+  ITS + EVL AG+++ KF +VA+I
Sbjct: 64  LPLRDLEDPLLCRVYVLRLLSYLDLNAVACDIIAHDITSFICEVLAAGNFEVKFRIVADI 123

Query: 123 DHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKKG 182
           DHIRM FW E+   S         RRGVV EE V+LE  P RR A +   ER  +REK  
Sbjct: 124 DHIRM-FWREQIGES---------RRGVVAEETVILEEAPTRRTAAKTAIER-LKREKFD 183

Query: 183 GFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           GF    ELGDC VC EELK+ +KEVSRI CGHVYHKSCILTW Q  +SCPLCRR++
Sbjct: 184 GF-RGEELGDCCVCCEELKEGKKEVSRIGCGHVYHKSCILTWAQNNDSCPLCRRKI 227

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BLAST of CsaV3_3G003210 vs. NCBI nr
Match: XP_022947841.1 (NEP1-interacting protein-like 1 [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 3.5e-49
Identity = 119/242 (49.17%), Postives = 155/242 (64.05%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           MP  +AST RYS+RR  G +Q LQ+RLG   RL+S SPSAGLPY+IL+E+ S P+ +A F
Sbjct: 1   MPFANASTLRYSLRRNHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLR++ED   C  Y+++L+SSFNLG+VT   I +KITS V +   A DYDAKF++VA+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLE--GVPGRRRAGERERERERERE 180
           ID+I+M+         W+ +   S  RGV+VEERVVLE  GV               E++
Sbjct: 121 IDYIQMF---------WMEKHRGSVGRGVMVEERVVLEETGVAA------------AEKQ 180

Query: 181 KKGGFDERRELGDCSVCQEEL---KDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRR 238
             GG        +CSVC E     K   KEV++I CGH +HKSCILTW Q  NSCPLCR 
Sbjct: 181 GIGG-------EECSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRA 213

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BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.9e-08
Identity = 21/52 (40.38%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 186 RRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           + E+  C+VC +E +D   +V ++ C HV+H+ C+L W+++ NSCP+CR E+
Sbjct: 210 KSEMNQCAVCMDEFED-GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

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BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 20/50 (40.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 188 ELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           E   C+VC ++ ++   E  ++ C H+YHK C+L W+++ NSCP+CR E+
Sbjct: 220 EFNQCAVCMDDFEE-GTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268

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BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 192 CSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVVFE 241
           C+VC+E    ++     + C H+YH  CIL W+ +RNSCP+CR E+  E
Sbjct: 201 CAVCKENFV-LKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAE 248

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BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07
Identity = 19/46 (41.30%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 192 CSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           C VC++E  +++ E  ++ C H+YH  CI+ W+   NSCP+CR+E+
Sbjct: 186 CPVCKDEF-ELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230

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BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-07
Identity = 19/47 (40.43%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 191 DCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           +C VC++E  ++  E  ++ C H+YH  CI+ W+   NSCP+CR+E+
Sbjct: 189 NCPVCKDEF-ELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

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BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL
Match: A0A0A0L2F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036440 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.7e-84
Identity = 173/194 (89.18%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRA-------------- 180
           IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRA              
Sbjct: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAAWSCGGGEGGSRGS 180

[Close]

BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL
Match: A0A5D3D7E9 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001290 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.8e-75
Identity = 156/204 (76.47%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCG-VEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEAT 60
           M L+ ASTFRYSIRR+ G ++QSLQIRLGR+V LLS  PSAGLPYEIL+E++SI + EAT
Sbjct: 1   MTLDGASTFRYSIRRKEGSIQQSLQIRLGRVVSLLSRPPSAGLPYEILKETSSISIQEAT 60

Query: 61  FPLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVA 120
           FPLPLRD+EDSCLCEIYI+QLLSSFNLGTVTSGIIS+KITSMVVEVL AGDYD KF++VA
Sbjct: 61  FPLPLRDLEDSCLCEIYIVQLLSSFNLGTVTSGIISRKITSMVVEVLAAGDYDTKFQIVA 120

Query: 121 EIDHIRMYFWTEEEERSWVGRGNNSE--RRGVVVEERVVLEGVPGRRRAGERERERERER 180
           EIDHI+MYFW EEEERSWVGRGNN+   RRGVVVEERVVLEGVP RRRA         ER
Sbjct: 121 EIDHIQMYFWGEEEERSWVGRGNNNSGIRRGVVVEERVVLEGVPARRRAA-------AER 180

Query: 181 EKKGGFDER-RELGDCSVCQEELK 201
           E+KGGFDER  +LGDC VC+EEL+
Sbjct: 181 EEKGGFDERGDQLGDCCVCREELR 197

[Close]

BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 119/242 (49.17%), Postives = 155/242 (64.05%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           MP  +AST RYS+RR  G +Q LQ+RLG   RL+S SPSAGLPY+IL+E+ S P+ +A F
Sbjct: 1   MPFANASTLRYSLRRNHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLR++ED   C  Y+++L+SSFNLG+VT   I +KITS V +   A DYDAKF++VA+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLE--GVPGRRRAGERERERERERE 180
           ID+I+M+         W+ +   S  RGV+VEERVVLE  GV               E++
Sbjct: 121 IDYIQMF---------WMEKHRGSVGRGVMVEERVVLEETGVAA------------AEKQ 180

Query: 181 KKGGFDERRELGDCSVCQEEL---KDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRR 238
             GG        +CSVC E     K   KEV++I CGH +HKSCILTW Q  NSCPLCR 
Sbjct: 181 GIGG-------EECSVCYESYEAEKGGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRA 213

[Close]

BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 111/240 (46.25%), Postives = 152/240 (63.33%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           MPL +AST RYS+RR  G +Q L+ RL    RL+S SPSAGLPY+IL+E+ S P+ +A F
Sbjct: 1   MPLANASTLRYSLRRNHGADQFLRFRLCYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLR++ED   C  Y+++L+SS NL +++   I +KITS+V +   A DYDAKF++VA+
Sbjct: 61  PLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180
           ID+I+M+         W+ +   S  RGV+VEE+VVL             +E E    +K
Sbjct: 121 IDYIQMF---------WMEKRPGSVGRGVMVEEKVVL-------------KEAEVAAAEK 180

Query: 181 GGFDERRELGDCSVCQEEL---KDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
            G        +CSVC E     K   +EV++I CGHV+HKSCILTW Q  NSCPLCR ++
Sbjct: 181 QGIGGE----ECSVCYESYEAEKGGEREVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL 213

[Close]

BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.3e-45
Identity = 111/237 (46.84%), Postives = 151/237 (63.71%), Query Frame = 0


Query: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60
           M   ++ST RYS+RR  G +Q LQ+RLG   RL+S SPSAGLPY+IL+E+   P+ +A F
Sbjct: 1   MLFANSSTLRYSLRRHHGTDQLLQVRLGYSSRLISQSPSAGLPYDILEETPLTPIADALF 60

Query: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120
           PLPLR++ED   C  Y+++L+SS NL +++   I +KITS+V +   A DYDAKF++V +
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSMSCNPIIQKITSLVTQ-WAAVDYDAKFQLVVD 120

Query: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180
           ID+I+M FW EE             RRGV+VEER+VL+      +AG           K+
Sbjct: 121 IDYIQM-FWREE--------SRGPVRRGVMVEERIVLD------KAGVAATVAAAAAGKQ 180

Query: 181 GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           G   E  E   C  C +E K   KEV++I CGH++HKSCILTW Q  NSCPLCR ++
Sbjct: 181 GMGGE--ECSVCYECYDEEKGGDKEVAKIPCGHMFHKSCILTWFQCSNSCPLCRAKL 219

[Close]

BLAST of CsaV3_3G003210 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-09
Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 188 ELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           ++  C+VC EE   V  + + + C H+YHK CI+ W+++ NSCP+CRR++
Sbjct: 220 DMSQCTVCMEEF-IVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]

BLAST of CsaV3_3G003210 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-09
Identity = 21/46 (45.65%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 192 CSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           C++C+EE  +V +E   ++C H+YH SCI++W+ + N+CP+CR EV
Sbjct: 138 CAICKEEF-EVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182

[Close]

BLAST of CsaV3_3G003210 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-09
Identity = 21/52 (40.38%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 186 RRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           + E+  C+VC +E +D   +V ++ C HV+H+ C+L W+++ NSCP+CR E+
Sbjct: 210 KSEMNQCAVCMDEFED-GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CsaV3_3G003210 vs. TAIR 10
Match: AT4G05350.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.4e-09
Identity = 23/54 (42.59%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 186 RRELGDCSVCQEELKDVRK--EVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           + E   CS+C E L    K  +V+R+ C HV+H  C+L W++ +N+CPLCR E+
Sbjct: 151 KMETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204

[Close]

BLAST of CsaV3_3G003210 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.4e-09
Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 0


Query: 192 CSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREV 238
           C+VC+EE+  V KEV+ + C H YH  CI+ W+ +RN+CP+CR E+
Sbjct: 372 CAVCKEEM-IVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416

The following BLAST results are available for this feature:

BLAST of CsaV3_3G003210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650076.1	1.4e-130	100.00	hypothetical protein Csa_011336 [Cucumis sativus]	[more]
TYK19474.1	1.4e-74	76.47	E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa]	[more]
XP_038876865.1	4.1e-74	64.61	putative RING-H2 finger protein ATL53 [Benincasa hispida]	[more]
XP_038905732.1	1.2e-57	57.63	E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]	[more]
XP_022947841.1	3.5e-49	49.17	NEP1-interacting protein-like 1 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G003210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	6.9e-08	40.38	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	9.0e-08	40.00	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22283	3.4e-07	42.86	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	3.4e-07	41.30	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22197	5.9e-07	40.43	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of CsaV3_3G003210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2F8	4.7e-84	89.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036440 PE=4 SV=1	[more]
A0A5D3D7E9	6.8e-75	76.47	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1G7L1	1.7e-49	49.17	NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE...	[more]
A0A6J1L186	2.5e-45	46.25	NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4...	[more]
A0A6J1L191	4.3e-45	46.84	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsaV3_3G003210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	2.9e-09	42.00	RING/U-box superfamily protein	[more]
AT1G68180.1	4.9e-09	45.65	RING/U-box superfamily protein	[more]
AT3G19950.1	4.9e-09	40.38	RING/U-box superfamily protein	[more]
AT4G05350.1	8.4e-09	42.59	RING/U-box superfamily protein	[more]
AT5G60820.1	8.4e-09	50.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 192..233 e-value: 4.9E-7 score: 39.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 191..234 e-value: 6.3E-12 score: 45.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 192..234 score: 13.094151
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 162..238 e-value: 1.9E-16 score: 61.5
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 153..237
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 153..237
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 191..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G003210.1	CsaV3_3G003210.1	mRNA