CsaV3_3G002720 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACAGCTGTTGGATCGATTTGCTGAGAATAATTTTGAACCCTTTGTTGGCTACACCGCCAGATAATTTCTTCAGAATTTTCTTCTCACAATCCCATCCCAACGCCGAGTTTTCCTAAAGACCCTTTTCCCAGGCCAGTTTTGCAACTGGCTAACACTCATCTGAGCCCTTCAATCTCTCCAAAACTGGGAATAAACCGATAGCATCAGAGCCAATTCTCGAAACCCAGTTACGTTTCATCCATGGCCGACCATCCTGATGATTTACACGAACTTCTAGATAGTATGCTCTTTAAACTTCATCCAATCCTTAGTGGGTTTTCGTTTTTCTTCTTGTTTGTTATGAATTCTGTTTGAATTGTCTCAGGTGCTTTGGATGATTTTCAGAAATTCGACCTTAATCCTTCCCTTTCGAGGTTTATCAATCAATATCTGTTAGAAGTTTTTTTTTTTTTTTTGGGTTTGGTGTTTTGTCGGTTTATTGATGTTTTTTGTTTTGTGTTCTTGTAGAAATGGAGATGGGGCGGAGAGTAGAGCGGTTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCAAGAAAAAGGGGAAGCAAAAAGTTTCAAAGGAATCCCATGTTTCTGAAGCTCTTGATAAGCTCAGAGAGCAGACCAGAGAGGCGGTTAAGGGGCTTGAATCAGTGTCAGGTCCTAAACCTGGTGAAGATGCTTTGATGGAGGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGGTACATTGCTCGAAGCCTTTGGAACCCATGAATGTTCAATTTTGGAAATACTTTTCTTAGTCTGAAGTGTCTTGAACAATGTTTTGTAATCTCAAGTGTTTAAATACTGATGGAGGGTGAGTTTGGTATGATGACGGAAGAGTCGTAATTGCTTTAAAGATTTTTTAAGAAGTTTTTTTATGGTGTTTGGTCCACAATTAAATGCGTTTCTTCTGAAAATTGCTCATAGAAAAAGTGCAGGAGGTAAAGATGCTTAGGAATTTCCCTAATTTCAGTCAGGATCTTCTGTCTTCTTCTATTGATTGAGTAAGTACCCCTGCCTTCTGTGAGTTGAGGATTAAATCTTCTTTCATTGTCAAGTAACCCGAGAGTTCAATGATTAAAGTGAAAGTTCGAGCCATCAACTATTGATATTGTAGTTTGTGCCTTATCCAGTGACTCATGTTCTGATTGGTTATTGACAAGTAACTTTTGAAACTGAGTCTTTTGTTTAGGAAGTTTAATGGAAATACTGGTGAGGATTCAATGATTGTAGAAGTGAAAGATCGAGCTGTCGATTTTTGAACTTTAGTTTTGCTGACAATAATGAAAATGCCTTATTCTTAGCATTTCCTTTTAGTTGCAAGTGTAACCGAATATTTTCTACCTCGTTTTTCAGAAGTCCGACGTCTTCCCTGGTCCTTTTTCATTGGAAATTTGTCTCTAGGATGGTGTATGATTTTTGGTTACCCTCTCACATCTTGCTTTAGGTCCTTTACTTACTGAGGTTTTGCCTACAGACACTTTAGATTTCCTATTCATGTAATGGAGTTTTTAGCTTGTGAGTTAAAATGTCTGTGTAATAAGTTTTCTGTTATCAATTACTTCTAAAATCATTTATTAATCACTGCTGAGAGAGAGATGGCTTCATTCTTGATTGGTGAATTCATTGGAATGGTAGGTGCATTGAGATAGTGGAGAATGGTCTAGGCACAAATATCTCATAAGTTCAACTTTTTATGTAAAATAGTTAGTAGTATTATCAGATTTTCCACCACTTCTCTCATGATGTGTGTGTGTGTGTGTGTATCATATTCAAATTGAGGATGGAGTAGATATTTCATTGAAGGAATATCTTTATTTTCTAATTGGAAGCTTAAACACTGAGGAGAAGCAGGTAGAACTCCTTTTCTGCAAGAAAAAAGTGTAAATGAAAAGGCAAAGGGTTTTCCTCAATCATTGTTTTTCGTGTAGTCTTTAGCTCCATTTCTATCATGGTTCTGCATTGAAATCTTAGAAAGAGGAAAAAGAAAAAAGAATTGACGTAATTTTGAGATGTTTAATAACATGATTGCATAGGATCCTAGGAATTGTTATAATGACTGATTTGGTCTGTAGCTGTGAGATTTCCCTTTTATTATTAACACGTAGGACAAGTCTCTTTAGGGACTTCCGATAGAATTGGAACAACAAAGTAAAGATAGCACAGTACAGTGGAACTGGAAATATTCACGGGGAAATGGAAACTTAACACTTCTAATTCCCATTGGAATCTTTTTAATACTCGTGGTGTTGGATCTCAGTCCTTGCGCTTTATGGTCATGACTCAACTTCCCACTAATCTCTAAGAAGGCTTCACCCACTTCAAGGTTAGCTTTAGAGACATCAAAGATCTCAAGTTGGGGTAGACATTCTGAGGTTCTTTGTTGGAGTTTTGATCACTCTTTTCTCATCCTAATATGAACAGTAAGGTTGTTTTGTTTAACACCTATTATCCAACAAATTTAAGCTGTCGATGGGTTGTGGTAAATTTAACTATATCAACACTTTAACACTCCCCACTTGTGGGTTTGAAAATTTGTAGAAAGCCTAACAAGTGGGAATTAGAATTAATTGAAGGAAATAACAGTCTAAGGGTTTCAACGCCATATTACTTCTTGACCTAATACCATGTTAACAAAAGCTTAGGTTAGTGAGATATGGTAAACATAGTTATATCGATATTTTATCATTACCATTTTCTCTGTTGGTTGAAATGGTAACTCTATGTTCTTTTATCTTCTTTTGAATTATGCTGTTTCTTGTTTTTCCATGTTAATCATACCATGCATTTAACATGCACCGCTCCTAACTGTAGGACATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTATCCAAAGAGATTCTCCATGAACCAATGAAGGAAATAGGAGAACGATATCCCAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAACCTGATAAAAGATCTCAACATTGTGTACGAACGTGAACCTGATAACTTCAATAAAATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGCCAGCCACCCAATGATATTGTGCAAGAGCTGGCACCTGATTTCGATTTGTCTAATCTTGCACAACTGTGAGTTTATTCTACCTGTGATCATCAACTAGTTAATGTTCTTATCTCATCAATTTTGTATTTTTTGTCATAAGCACATATAAGTACATTAAAATGAAGTTCTGAGATGTGTTGCGAGTAAAATGAAAGAAAAACTGGATCAAATTTTGATGCTATGTTGACAATAATCAGTATACTCTTCTCTATGCAGATCTCCAGAAATGTTAGAGTCGCAGCCGAATTGTTGTATAATGTGAGGTGAAACTTTTAAATGCCTTTGTGCTGCTTCCTTCCATTTACTCTCATATTTAGATATTGTTATATTCAAGAAATTACTTTGTCCAATAATCTCGTGTTCATTTTCAATGTTCAGCTGTAGTTTTTTAGTTTATACTCCTTTTATAATCTTAGGGTGGTGGATGAGTATTGGACTCAGATATATTTCTCTTTTCTCTCTCAAATACACACATGGGATTCTTTGTAGTATTAGAAATGATTTCTTCTGCGTTGTCTGTTCTATGAATCCTTGTTCGATCTCTGTTCTATGAATCCTTGTTCGATCTCTCATGCACATGTTTGCACAAACAGATACACATTTTGTGTGACTTTCTGAATGTTTATAAACACTTAAAAAGTCAATCCATACACATCCAAAGTAATTTCTTTTTCCTTATCTATTGTGCCTTTGTTTTGGTTTGAATCCTGCATTCCTCGAGCTTGAGCTCACGTGTGCGTACAACTACAGGTTTATTGTAGTGTCAAGAAATTATCCTCTCCATGTTTGCTGCACCCTTCGGTTTGAATCATGCACTTTTCTCTCCATACACGCAGTAATTTTGTAGTATTCGACATGGTTTCGTCCTAGTTCATTTTCCTGTGCTTTGACTTGGATTATGTAGTGGAAGTGGCACAACACCTTGTGGAGCCTTTGAATGGAACTGAATATTCTGCTTCGTCCTCGTAGTCCAAACTCAAAGTATACTTTTTTTTTAATCTTATTTTCTCTAAATGATGATAATTATAATGATAAGAGGCCATGATGAAGGTTTGATTTCTGTTCCATTTTAGTTCTTGATATCGTAAATTATAATATTTTATTTTATTTTATTTTTTATATGATGATAATCAATCATTCTAGATTTTCCTGTTATTTTTTGAAATTATGTAGAAAAAAAAATACTACATTTTATGTCTTCATGGTTTAATCCATTTAACAAATAATAATAATGAGTTTCATTGGGTGGAA ATGGCCGACCATCCTGATGATTTACACGAACTTCTAGATAGTGCTTTGGATGATTTTCAGAAATTCGACCTTAATCCTTCCCTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGCGGTTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCAAGAAAAAGGGGAAGCAAAAAGTTTCAAAGGAATCCCATGTTTCTGAAGCTCTTGATAAGCTCAGAGAGCAGACCAGAGAGGCGGTTAAGGGGCTTGAATCAGTGTCAGGTCCTAAACCTGGTGAAGATGCTTTGATGGAGGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGGACATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTATCCAAAGAGATTCTCCATGAACCAATGAAGGAAATAGGAGAACGATATCCCAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAACCTGATAAAAGATCTCAACATTGTGTACGAACGTGAACCTGATAACTTCAATAAAATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGCCAGCCACCCAATGATATTGTGCAAGAGCTGGCACCTGATTTCGATTTGTCTAATCTTGCACAACTATCTCCAGAAATGTTAGAGTCGCAGCCGAATTGTTGTATAATGTGA ATGGCCGACCATCCTGATGATTTACACGAACTTCTAGATAGTGCTTTGGATGATTTTCAGAAATTCGACCTTAATCCTTCCCTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGCGGTTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCAAGAAAAAGGGGAAGCAAAAAGTTTCAAAGGAATCCCATGTTTCTGAAGCTCTTGATAAGCTCAGAGAGCAGACCAGAGAGGCGGTTAAGGGGCTTGAATCAGTGTCAGGTCCTAAACCTGGTGAAGATGCTTTGATGGAGGATTGGGTGAAGCAGTTCGAGGAGATGGCTGGCTCTCAGGACATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTATCCAAAGAGATTCTCCATGAACCAATGAAGGAAATAGGAGAACGATATCCCAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAACCTGATAAAAGATCTCAACATTGTGTACGAACGTGAACCTGATAACTTCAATAAAATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGCCAGCCACCCAATGATATTGTGCAAGAGCTGGCACCTGATTTCGATTTGTCTAATCTTGCACAACTATCTCCAGAAATGTTAGAGTCGCAGCCGAATTGTTGTATAATGTGA MADHPDDLHELLDSALDDFQKFDLNPSLSRNGDGAESRAVLPSGVQGLGMGLPDLRSKKKGKQKVSKESHVSEALDKLREQTREAVKGLESVSGPKPGEDALMEDWVKQFEEMAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDLNIVYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCIM* Homology
BLAST of CsaV3_3G002720 vs. NCBI nr
Match: XP_011650400.1 (peroxisome biogenesis protein 19-2 [Cucumis sativus] >XP_031739373.1 peroxisome biogenesis protein 19-2 [Cucumis sativus] >KGN55863.1 hypothetical protein Csa_011489 [Cucumis sativus]) HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. NCBI nr
Match: XP_008448848.1 (PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis melo] >KAA0041087.1 peroxisome biogenesis protein 19-1-like [Cucumis melo var. makuwa] >TYK12023.1 peroxisome biogenesis protein 19-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 453.8 bits (1166), Expect = 9.5e-124 Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. NCBI nr
Match: XP_038906370.1 (peroxisome biogenesis protein 19-1-like [Benincasa hispida]) HSP 1 Score: 448.4 bits (1152), Expect = 4.0e-122 Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. NCBI nr
Match: XP_022965158.1 (peroxisome biogenesis protein 19-2-like [Cucurbita maxima] >XP_023552293.1 peroxisome biogenesis protein 19-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120 Identity = 227/242 (93.80%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. NCBI nr
Match: KAG6577685.1 (Peroxisome biogenesis protein 19-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119 Identity = 226/242 (93.39%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy Swiss-Prot
Match: Q94EI3 (Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana OX=3702 GN=PEX19-2 PE=1 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.1e-87 Identity = 161/240 (67.08%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy Swiss-Prot
Match: Q9SRQ3 (Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana OX=3702 GN=PEX19-1 PE=1 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.5e-87 Identity = 169/246 (68.70%), Postives = 204/246 (82.93%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy Swiss-Prot
Match: Q9QYU1 (Peroxisomal biogenesis factor 19 OS=Rattus norvegicus OX=10116 GN=Pex19 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15 Identity = 76/284 (26.76%), Postives = 128/284 (45.07%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy Swiss-Prot
Match: P40855 (Peroxisomal biogenesis factor 19 OS=Homo sapiens OX=9606 GN=PEX19 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.5e-15 Identity = 78/289 (26.99%), Postives = 130/289 (44.98%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy Swiss-Prot
Match: Q60415 (Peroxisomal biogenesis factor 19 OS=Cricetulus griseus OX=10029 GN=PEX19 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.8e-15 Identity = 73/284 (25.70%), Postives = 127/284 (44.72%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy TrEMBL
Match: A0A0A0L283 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020030 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 8.9e-128 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy TrEMBL
Match: A0A5D3CJA6 (Peroxisome biogenesis protein 19-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00320 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.6e-124 Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy TrEMBL
Match: A0A1S3BKN2 (peroxisome biogenesis protein 19-1-like OS=Cucumis melo OX=3656 GN=LOC103490885 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.6e-124 Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy TrEMBL
Match: A0A6J1HN20 (peroxisome biogenesis protein 19-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465099 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.1e-120 Identity = 227/242 (93.80%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. ExPASy TrEMBL
Match: A0A6J1E6H4 (peroxisome biogenesis protein 19-2-like OS=Cucurbita moschata OX=3662 GN=LOC111431048 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119 Identity = 225/242 (92.98%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. TAIR 10
Match: AT5G17550.1 (peroxin 19-2 ) HSP 1 Score: 324.3 bits (830), Expect = 8.1e-89 Identity = 161/240 (67.08%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of CsaV3_3G002720 vs. TAIR 10
Match: AT3G03490.1 (peroxin 19-1 ) HSP 1 Score: 323.2 bits (827), Expect = 1.8e-88 Identity = 169/246 (68.70%), Postives = 204/246 (82.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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