CsaV3_3G002500 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G002500
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Homeobox-leucine zipper family protein
Location	chr3: 2009009 .. 2009928 (-)
RNA-Seq Expression	CsaV3_3G002500
Synteny	CsaV3_3G002500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCAGGTGTTGAACTTTTTGCTGATCGGACATCGGAAACAGGGAGATCGCTTCTCAGAAGCATCGAAGTGAATCGGATGGCGCCGTCGACGGCGGATTATGAAGAGGAGGCGAGGATGTCGAAGCCTAGCAGTACGGGGTCGAGTGTGTATGGGAAATGGATTGAACATGAGATGAACGATGAAGATGTGGATGGGGATGGAGCTTGTTCGAGAAGGATAAGTGATGAAAAAGATGGTGGAACTTGTCGAAAAAGGTTTCGGTTTACTGAAGATCAGTCGGCCGTTTTGAAAGAAAGCTCTGAAGAACATGATAGTCTCAATCCCGTAAGTCTTCGAATGGTTTGTTTTTGTTAGTATGGAAGGTTTTCTGGGGAAAAACAAAGGGCTATATTTGTGGGAAAATTGATGGGGTGTTATAGTAAATTTTTGCAAGAGCAAACGTTGGAGTTGGCGATACAGTTGGGTCTCCGGCCGAGACAAGTCGAAGTTTGGTTCCAACGTCTTAGTGCAAATGTGAAAATTAATGCAAATGTGAAAAAATGGAAACCAATGTGCAAATTTGAAAGAAGGAATCAGAGTACAAACAATTTTCGTGTTCATCATCAACTACACTAACCTTTCCAAAAGAGCGCCACCCGTGCCATGCTCCACCGATGCGAACTCTTTCGTTCAACACATGGTAGCATCTGTCACATGAAGCCCTTAATCGAAACATAGAGAGGAAGGATTGGCAAAATCGAAAAAGAGCCAAATCGAAGCGGCAAGACATCATCGGAGTGGCAAGGGGAAGTCGAACATCTAATTGTTACAGCAAAGCCCTTAATCGAAACATAGAGAGGAAGGATTTGGTTTCGGAGGCAGCGGGTGTGACTAACGGGCCAATGAAACCACAGAGACGAAGAGATCCGTTTTAG

mRNA sequence

ATGGAATCAGGTGTTGAACTTTTTGCTGATCGGACATCGGAAACAGGGAGATCGCTTCTCAGAAGCATCGAAGTGAATCGGATGGCGCCGTCGACGGCGGATTATGAAGAGGAGGCGAGGATGTCGAAGCCTAGCAGTACGGGGTCGAGTGTGTATGGGAAATGGATTGAACATGAGATGAACGATGAAGATGTGGATGGGGATGGAGCTTGTTCGAGAAGGATAAGTGATGAAAAAGATGGTGGAACTTGTCGAAAAAGGTTTCGGTTTACTGAAGATCAGTCGGCCGTTTTGAAAGAAAGCTCTGAAGAACATGATAGTCTCAATCCCCATCTGTCACATGAAGCCCTTAATCGAAACATAGAGAGGAAGGATTGGCAAAATCGAAAAAGAGCCAAATCGAAGCGGCAAGACATCATCGGAGTGGCAAGGGGAAGTCGAACATCTAATTGTTACAGCAAAGCCCTTAATCGAAACATAGAGAGGAAGGATTTGGTTTCGGAGGCAGCGGGTGTGACTAACGGGCCAATGAAACCACAGAGACGAAGAGATCCGTTTTAG

Coding sequence (CDS)

ATGGAATCAGGTGTTGAACTTTTTGCTGATCGGACATCGGAAACAGGGAGATCGCTTCTCAGAAGCATCGAAGTGAATCGGATGGCGCCGTCGACGGCGGATTATGAAGAGGAGGCGAGGATGTCGAAGCCTAGCAGTACGGGGTCGAGTGTGTATGGGAAATGGATTGAACATGAGATGAACGATGAAGATGTGGATGGGGATGGAGCTTGTTCGAGAAGGATAAGTGATGAAAAAGATGGTGGAACTTGTCGAAAAAGGTTTCGGTTTACTGAAGATCAGTCGGCCGTTTTGAAAGAAAGCTCTGAAGAACATGATAGTCTCAATCCCCATCTGTCACATGAAGCCCTTAATCGAAACATAGAGAGGAAGGATTGGCAAAATCGAAAAAGAGCCAAATCGAAGCGGCAAGACATCATCGGAGTGGCAAGGGGAAGTCGAACATCTAATTGTTACAGCAAAGCCCTTAATCGAAACATAGAGAGGAAGGATTTGGTTTCGGAGGCAGCGGGTGTGACTAACGGGCCAATGAAACCACAGAGACGAAGAGATCCGTTTTAG

Protein sequence

MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRNIERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQRRRDPF*

Homology

[Close]

BLAST of CsaV3_3G002500 vs. NCBI nr
Match: KAE8650051.1 (hypothetical protein Csa_010109 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60
           MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM
Sbjct: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60

Query: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRN 120
           NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRN
Sbjct: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRN 120

Query: 121 IERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQ 180
           IERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQ
Sbjct: 121 IERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQ 180

Query: 181 RRRDPF 187
           RRRDPF
Sbjct: 181 RRRDPF 186

[Close]

BLAST of CsaV3_3G002500 vs. NCBI nr
Match: XP_031737898.1 (homeobox-leucine zipper protein HAT4-like [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 9.0e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60
           MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM
Sbjct: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60

Query: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNP 111
           NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNP
Sbjct: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNP 110

[Close]

BLAST of CsaV3_3G002500 vs. NCBI nr
Match: XP_008448815.2 (PREDICTED: homeobox-leucine zipper protein HAT4 [Cucumis melo] >KAA0041070.1 homeobox-leucine zipper protein HAT4 [Cucumis melo var. makuwa] >TYK12038.1 homeobox-leucine zipper protein HAT4 [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-28
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNRM PSTAD EEEA MS P+ST SSV GK  E EMN ED+DGD
Sbjct: 33  SDRTSETGRSLLRGIDVNRMPPSTADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGD 92

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
            ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  + +
Sbjct: 93  RACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVE 152

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 153 VWFQNRRARTK 163

[Close]

BLAST of CsaV3_3G002500 vs. NCBI nr
Match: XP_004147222.1 (homeobox-leucine zipper protein HAT4 [Cucumis sativus] >KGN55846.1 hypothetical protein Csa_010406 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-28
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNRM PSTAD EEEA MS P+ST SSV GK  E EMN ED+DGD
Sbjct: 33  SDRTSETGRSLLRGIDVNRMPPSTADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGD 92

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
            ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  + +
Sbjct: 93  RACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVE 152

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 153 VWFQNRRARTK 163

[Close]

BLAST of CsaV3_3G002500 vs. NCBI nr
Match: XP_038906160.1 (homeobox-leucine zipper protein HAT4 [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 7.1e-26
Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPST--ADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVD 68
           +DRTSETGRSLLR I+VNRM PS+  AD EEEA MS P+ST SSV GK  E EMN ED+D
Sbjct: 38  SDRTSETGRSLLRGIDVNRMPPSSSAADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLD 97

Query: 69  GDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIE 128
           GD ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  +
Sbjct: 98  GDRACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQ 157

Query: 129 RKDWQNRKRAKSK 136
            + W   +RA++K
Sbjct: 158 VEVWFQNRRARTK 170

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot
Match: Q05466 (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-12
Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADY-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDG 68
           +D + +  R+ +R I+VNR  PSTA+Y +E+A +S P+ST SS  GK  E E   ED D 
Sbjct: 57  SDSSQKETRTFIRGIDVNR-PPSTAEYGDEDAGVSSPNSTVSSSTGKRSERE---EDTDP 116

Query: 69  DGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIER 128
            G  SR ISD++DG   RK+ R ++DQSA+L+E+ ++H +LNP     L+ +   R  + 
Sbjct: 117 QG--SRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQV 176

Query: 129 KDWQNRKRAKSK 136
           + W   +RA++K
Sbjct: 177 EVWFQNRRARTK 182

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot
Match: P46600 (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana OX=3702 GN=HAT1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 17  RSLLRSIEVNRMAPSTADYEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVD 76
           +  LR I+VN + P+T D EEE  +S P+ST  S+V GK    E          +D D+ 
Sbjct: 54  QQFLRKIDVNSL-PTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDIT 113

Query: 77  GDGACSRRISDEKD---GGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRNI-- 136
            D + SR  SDE++   G TCRK+ R ++DQSAVL+++ +EH++LNP     AL + +  
Sbjct: 114 LDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPK-QKLALAKKLGL 173

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot
Match: P46601 (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana OX=3702 GN=HAT2 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 0


Query: 20  LRSIEVNRMAPSTADYEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGD 79
           LR I+VN   PST + EE+  +S P+ST  S++ GK  E E           + +++  D
Sbjct: 52  LRKIDVNSF-PSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPD 111

Query: 80  GACSRRISD-EKDGG-TCRKRFRFTEDQSAVLKESSEEHDSLNPHLS---HEALNRNIER 136
              SR  SD E+DGG T RK+ R ++DQSA L+E+ +EH++LNP       + LN    +
Sbjct: 112 RGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQ 171

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot
Match: Q40691 (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica OX=39946 GN=HOX1 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-05
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 0


Query: 20  LRSIEVNR-----------MAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 79
           LR I+VNR             PS ++ +EE   S P+ST SS+ GK              
Sbjct: 86  LRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGK------RGAPSAAT 145

Query: 80  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRNIERKD--- 136
            A +    DE  GG  RK+ R ++DQ+AVL+++ +EH++LNP     AL R +  K    
Sbjct: 146 AAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPK-QKAALARQLNLKPRQV 205

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot
Match: Q7XC54 (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-05
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 0


Query: 20  LRSIEVNR-----------MAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 79
           LR I+VNR             PS ++ +EE   S P+ST SS+ GK              
Sbjct: 86  LRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGK------RGAPSAAT 145

Query: 80  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRNIERKD--- 136
            A +    DE  GG  RK+ R ++DQ+AVL+++ +EH++LNP     AL R +  K    
Sbjct: 146 AAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPK-QKAALARQLNLKPRQV 205

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL
Match: A0A0A0L5G0 (HD-ZIP_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019330 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.6e-90
Identity = 186/245 (75.92%), Postives = 186/245 (75.92%), Query Frame = 0


Query: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60
           MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM
Sbjct: 1   MESGVELFADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEM 60

Query: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNP---------- 120
           NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNP          
Sbjct: 61  NDEDVDGDGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPYGRFSGEKQR 120

Query: 121 -------------------------------------------------HLSHEALNRNI 180
                                                            HLSHEALNRNI
Sbjct: 121 AIFVGKLMGCYSKFLQEQTLELAIQLGLRPRQVEVWFQRLSANVKINANHLSHEALNRNI 180

Query: 181 ERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQR 187
           ERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQR
Sbjct: 181 ERKDWQNRKRAKSKRQDIIGVARGSRTSNCYSKALNRNIERKDLVSEAAGVTNGPMKPQR 240

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL
Match: A0A5D3CLM5 (Homeobox-leucine zipper protein HAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00510 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNRM PSTAD EEEA MS P+ST SSV GK  E EMN ED+DGD
Sbjct: 33  SDRTSETGRSLLRGIDVNRMPPSTADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGD 92

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
            ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  + +
Sbjct: 93  RACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVE 152

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 153 VWFQNRRARTK 163

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL
Match: A0A0A0L6T6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019370 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNRM PSTAD EEEA MS P+ST SSV GK  E EMN ED+DGD
Sbjct: 33  SDRTSETGRSLLRGIDVNRMPPSTADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGD 92

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
            ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  + +
Sbjct: 93  RACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVE 152

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 153 VWFQNRRARTK 163

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL
Match: A0A1S3BJZ9 (homeobox-leucine zipper protein HAT4 OS=Cucumis melo OX=3656 GN=LOC103490870 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNRM PSTAD EEEA MS P+ST SSV GK  E EMN ED+DGD
Sbjct: 33  SDRTSETGRSLLRGIDVNRMPPSTADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGD 92

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
            ACSR ISDE+DG T RK+ R T+DQSAVL+ES +EH++LNP     L+ +   R  + +
Sbjct: 93  RACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVE 152

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 153 VWFQNRRARTK 163

[Close]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL
Match: A0A6J1E9Y0 (homeobox-leucine zipper protein HAT4 OS=Cucurbita moschata OX=3662 GN=LOC111431205 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.9e-25
Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADYEEEARMSKPSSTGSSVYGKWIEHEMNDEDVDGD 68
           +DRTSETGRSLLR I+VNR+ PSTAD EEEA MS P+ST SSV GK  E E N ED+DGD
Sbjct: 39  SDRTSETGRSLLRGIDVNRIPPSTADCEEEAAMSSPNSTVSSVSGKRSERETNGEDLDGD 98

Query: 69  GACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIERK 128
             C R ISDE+DG T RK+ R T+DQSAVL++S +EH++LNP     L+ +   R  + +
Sbjct: 99  RDCFRGISDEEDGETSRKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVE 158

Query: 129 DWQNRKRAKSK 136
            W   +RA++K
Sbjct: 159 VWFQNRRARTK 169

[Close]

BLAST of CsaV3_3G002500 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTADY-EEEARMSKPSSTGSSVYGKWIEHEMNDEDVDG 68
           +D + +  R+ +R I+VNR  PSTA+Y +E+A +S P+ST SS  GK  E E   ED D 
Sbjct: 57  SDSSQKETRTFIRGIDVNR-PPSTAEYGDEDAGVSSPNSTVSSSTGKRSERE---EDTDP 116

Query: 69  DGACSRRISDEKDGGTCRKRFRFTEDQSAVLKESSEEHDSLNPH----LSHEALNRNIER 128
            G  SR ISD++DG   RK+ R ++DQSA+L+E+ ++H +LNP     L+ +   R  + 
Sbjct: 117 QG--SRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQV 176

Query: 129 KDWQNRKRAKSK 136
           + W   +RA++K
Sbjct: 177 EVWFQNRRARTK 182

[Close]

BLAST of CsaV3_3G002500 vs. TAIR 10
Match: AT4G17460.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 17  RSLLRSIEVNRMAPSTADYEEEARMSKPSST-GSSVYGKWIEHEM---------NDEDVD 76
           +  LR I+VN + P+T D EEE  +S P+ST  S+V GK    E          +D D+ 
Sbjct: 54  QQFLRKIDVNSL-PTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDIT 113

Query: 77  GDGACSRRISDEKD---GGTCRKRFRFTEDQSAVLKESSEEHDSLNPHLSHEALNRNI-- 136
            D + SR  SDE++   G TCRK+ R ++DQSAVL+++ +EH++LNP     AL + +  
Sbjct: 114 LDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPK-QKLALAKKLGL 173

[Close]

BLAST of CsaV3_3G002500 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 0


Query: 20  LRSIEVNRMAPSTADYEEEARMSKPSST-GSSVYGKWIEHE----------MNDEDVDGD 79
           LR I+VN   PST + EE+  +S P+ST  S++ GK  E E           + +++  D
Sbjct: 52  LRKIDVNSF-PSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPD 111

Query: 80  GACSRRISD-EKDGG-TCRKRFRFTEDQSAVLKESSEEHDSLNPHLS---HEALNRNIER 136
              SR  SD E+DGG T RK+ R ++DQSA L+E+ +EH++LNP       + LN    +
Sbjct: 112 RGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQ 171

[Close]

BLAST of CsaV3_3G002500 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-07
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPSTA--DYEEEAR-MSKPSSTGSSVYGKWIEHEM---ND 68
           A+R S+ G S LR   VNR   S A  D EEEA  +S P+S  SS+ G   +  +    D
Sbjct: 74  AERNSDAG-SFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGD 133

Query: 69  EDVDGDGACSR----RISDEKDGGT---CRKRFRFTEDQSAVLKESSEEHDSLNPH---- 128
           E+     +CSR      SD++DGG     RK+ R ++DQ+ VL+E+ +EH +LNP     
Sbjct: 134 ENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLA 193

Query: 129 LSHEALNRNIERKDWQNRKRAKSK 136
           L+ +   R  + + W   +RA++K
Sbjct: 194 LAKQLNLRARQVEVWFQNRRARTK 216

[Close]

BLAST of CsaV3_3G002500 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 48.9 bits (115), Expect = 5.1e-06
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 9   ADRTSETGRSLLRSIEVNRMAPST--ADYEEE-ARMSKPSSTGSSVY-GKWIEHEM---- 68
           ++R S+  RS LR I+VNR APST   D E+E A +S P+ST SSV  GK  E E+    
Sbjct: 66  SERNSDM-RSFLRGIDVNR-APSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAA 125

Query: 69  --------NDEDVDGDGACSRRISDEKDGG-----TCRKRFRFTEDQSAVLKESSEEHDS 128
                    D +++         SD++DG      + RK+ R +++Q+ VL+E+ +EH +
Sbjct: 126 GAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHST 185

Query: 129 LNPH----LSHEALNRNIERKDWQNRKRAKSK 136
           LNP     L+ +   R  + + W   +RA++K
Sbjct: 186 LNPKQKMALAKQLNLRTRQVEVWFQNRRARTK 215

The following BLAST results are available for this feature:

BLAST of CsaV3_3G002500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650051.1	1.2e-97	100.00	hypothetical protein Csa_010109 [Cucumis sativus]	[more]
XP_031737898.1	9.0e-53	100.00	homeobox-leucine zipper protein HAT4-like [Cucumis sativus]	[more]
XP_008448815.2	7.6e-28	60.31	PREDICTED: homeobox-leucine zipper protein HAT4 [Cucumis melo] >KAA0041070.1 hom...	[more]
XP_004147222.1	7.6e-28	60.31	homeobox-leucine zipper protein HAT4 [Cucumis sativus] >KGN55846.1 hypothetical ...	[more]
XP_038906160.1	7.1e-26	58.65	homeobox-leucine zipper protein HAT4 [Benincasa hispida]	[more]

BLAST of CsaV3_3G002500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05466	2.7e-12	40.91	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=...	[more]
P46600	1.8e-08	37.23	Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana OX=3702 GN=HAT1 PE=...	[more]
P46601	1.7e-06	36.84	Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana OX=3702 GN=HAT2 PE=...	[more]
Q40691	3.2e-05	33.33	Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q7XC54	3.2e-05	33.33	Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of CsaV3_3G002500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5G0	7.6e-90	75.92	HD-ZIP_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019330 PE...	[more]
A0A5D3CLM5	3.7e-28	60.31	Homeobox-leucine zipper protein HAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0L6T6	3.7e-28	60.31	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019370 PE...	[more]
A0A1S3BJZ9	3.7e-28	60.31	homeobox-leucine zipper protein HAT4 OS=Cucumis melo OX=3656 GN=LOC103490870 PE=...	[more]
A0A6J1E9Y0	2.9e-25	56.49	homeobox-leucine zipper protein HAT4 OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]

BLAST of CsaV3_3G002500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16780.1	1.9e-13	40.91	homeobox protein 2	[more]
AT4G17460.1	1.3e-09	37.23	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT5G47370.1	1.2e-07	36.84	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT2G44910.1	7.9e-07	36.11	homeobox-leucine zipper protein 4	[more]
AT3G60390.1	5.1e-06	34.21	homeobox-leucine zipper protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006712	HD-ZIP protein, N-terminal	PFAM	PF04618	HD-ZIP_N	coord: 10..57 e-value: 6.1E-8 score: 33.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..140
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 14..133
None	No IPR available	PANTHER	PTHR45714:SF3	HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN	coord: 14..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G002500.1	CsaV3_3G002500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus