CsaV3_3G001700 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G001700
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 1295553 .. 1295799 (+)
RNA-Seq ExpressionCsaV3_3G001700
SyntenyCsaV3_3G001700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGGTAAGTACTATTAGTATAATTGTACTATAAGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA

mRNA sequence

ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA

Coding sequence (CDS)

ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA

Protein sequence

MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKPLGSFFSSSLLC*
Homology
[Close]
BLAST of CsaV3_3G001700 vs. NCBI nr
Match: KGN55758.1 (hypothetical protein Csa_010251 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 4.8e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
          MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60

Query: 61 LGSFFSSSLLC 72
          LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71

[Close]
BLAST of CsaV3_3G001700 vs. ExPASy TrEMBL
Match: A0A0A0L1V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011610 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
          MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60

Query: 61 LGSFFSSSLLC 72
          LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71

The following BLAST results are available for this feature:
BLAST of CsaV3_3G001700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55758.14.8e-31100.00hypothetical protein Csa_010251 [Cucumis sativus][more]
BLAST of CsaV3_3G001700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G001700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1V82.3e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011610 PE=4 SV=1[more]
BLAST of CsaV3_3G001700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G001700.1CsaV3_3G001700.1mRNA