CsaV3_3G001650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G001650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Glycine-rich cell wall structural protein 1.8-like
Location	chr3: 1264033 .. 1264916 (+)
RNA-Seq Expression	CsaV3_3G001650
Synteny	CsaV3_3G001650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATTTTCTTGGCATTCTACTCATTCTCTAATTCTCTCCATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACTTCAATATGGCTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATGGGGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTACTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGAGAAACCCTTGGCTTCTTTTTCTTATTATACTATGCCAGCTAAAATAAAAATATGGGGTAAGGGATCAAGAATATTGTTATCTAAATCTATGTTTGAGTTGCTCTTGTAATGAATGTAATTAATGATATAAACAAAATTTGGATTACATTTTGTATGAACCAAGTGAT

mRNA sequence

ATGCATGCATTTTCTTGGCATTCTACTCATTCTCTAATTCTCTCCATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACTTCAATATGGCTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATGGGGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTACTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGA

Coding sequence (CDS)

ATGCATGCATTTTCTTGGCATTCTACTCATTCTCTAATTCTCTCCATGGCTATCCTTAGAGCACTGTGCCTTGCCTTTCTTCTCTTTGTACGGTTAGGTTTAGCTTCGGCTACTAGAACTCTTCTTGATTATGATCCACGTACACTTCAATATGGCTATGATCGTCCTAGTCCAAGAGTAGGGTATGATCCTGGCCATGGGGATGAATCCTATGATAAGGCATACGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCTGCTCTTGGAGGTTCTGGATACGAAGGTGGTGGAAGACACGATTATGGATATGGAGATCGACATAATGATCGTGGGGTTGGATATGGTAATTATGGTGGTGGATATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAACAATGGTGGTGGAAGCTATGGAGATCGTTATGGACCTTCTCTTGGAGGTTCAGGATATGGAAGTGGAGGAAAAGGAAGTGGCAATGGCTATGACGATCATTCTCGTGGAAATGGTGCACGTGACAATAGCTATGGAGATTCTCATGGACATGGAGGACGTGACAGTGGATATGGGAGTGGTGGAGGAGTTACTGGTGGCTATGGTAATGGAGGAGTGCATGGAGGAGAGTATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGTTATGATGGTGGATATGCTGTTAAGAACTCCATCTCAAAGGGAAATTGA

Protein sequence

MHAFSWHSTHSLILSMAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN*

Homology

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BLAST of CsaV3_3G001650 vs. NCBI nr
Match: KAE8650024.1 (hypothetical protein Csa_011560 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 2.4e-119
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MHAFSWHSTHSLILSMAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRV 60
           MHAFSWHSTHSLILSMAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRV
Sbjct: 1   MHAFSWHSTHSLILSMAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRV 60

Query: 61  GYDPGHGDESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYG 120
           GYDPGHGDESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYG
Sbjct: 61  GYDPGHGDESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYG 120

Query: 121 GGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYG 180
           GGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYG
Sbjct: 121 GGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYG 180

Query: 181 DSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           DSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 DSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 238

[Close]

BLAST of CsaV3_3G001650 vs. NCBI nr
Match: XP_011652712.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 4.6e-110
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135
           GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 195
           NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 196 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

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BLAST of CsaV3_3G001650 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 7.1e-95
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAILRALCLAFLLFV LGLASATRTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 195
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 196 GGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           GGGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CsaV3_3G001650 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-79
Identity = 185/256 (72.27%), Postives = 198/256 (77.34%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAI + LC+ FLLFV LGLASA RTLLDYDPRT +Y YD P+PRVGYDP H D+SYD AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 76  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 135
            GSSS+G+G+GDSALGGSG YEGGG  D GYG R++DRG GYG                 
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 136 ---------------NYGGGYGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG 195
                            GGGYG VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG 180

Query: 196 NGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEG 239
           NGYDDHSRGNGARDN+YGDSHGH GRDSGYGSGGGV+GGYGNGGVHGGE+DNSKGSGEEG
Sbjct: 181 NGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEG 240

[Close]

BLAST of CsaV3_3G001650 vs. NCBI nr
Match: XP_008449164.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KAA0053037.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] >TYK11492.1 glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 5.1e-77
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAI RALC++FLLFV LGLASA RTLLDYDPRT +Y YD P+PRVGYDP H D+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 135
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 136 ----------------------------------------------------NYGGGYGG 195
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 196 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 239
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

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BLAST of CsaV3_3G001650 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 74/171 (43.27%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 65  GHGDESYDKAYGGSSSRGHGIGDSA--LGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGG 124
           GHG    +   GG  + G G G  A   GG GY GGG +  GYG        G G+ GGG
Sbjct: 87  GHGGGGGNGGGGGGGADGGGYGGGAGKGGGEGYGGGGANGGGYGG-------GGGSGGGG 146

Query: 125 YGGVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRG--NGARDNSYG 184
            GG GG G GYG   G   G  YG + GG G G+GG G G     H  G   G      G
Sbjct: 147 GGGAGGAGSGYGGGEGSGAGGGYGGANGGGGGGNGGGGGGGSGGAHGGGAAGGGEGAGQG 206

Query: 185 DSHGHGG---RDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGY 229
              G+GG      G GSGGG  GGYG GG  G  Y    GSGE GG+ GGY
Sbjct: 207 AGGGYGGGAAGGGGRGSGGGGGGGYGGGGARGSGYGGGGGSGEGGGHGGGY 250

[Close]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-110
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135
           GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 120

Query: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 195
           NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG
Sbjct: 121 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGSG 180

Query: 196 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAILRALCLAFLLFV LGLASATRTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 195
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 196 GGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           GGGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAILRALCLAFLLFV LGLASATRTLLDYDPRT  YGYDRPSPRVGYDPGH DESYD AY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGN 135
           GGSSSRGHGIGDSALGGSGYEGGGR DYGYGDR+++RGVGYGN GGGYGGVGGHGDGYGN
Sbjct: 61  GGSSSRGHGIGDSALGGSGYEGGGRRDYGYGDRNDNRGVGYGN-GGGYGGVGGHGDGYGN 120

Query: 136 NGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDD-HSRGNGARDNSYGDSHGHGGRDSGYGS 195
           NGGG YGDRYGPSLGGSGYGSGGKGS NGYDD HS G G RDN YGDSHGH GRDSGYGS
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 196 GGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 239
           GGGV+GGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.5e-77
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAI RALC++FLLFV LGLASA RTLLDYDPRT +Y YD P+PRVGYDP H D+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 135
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 136 ----------------------------------------------------NYGGGYGG 195
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 196 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 239
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.5e-77
Identity = 188/293 (64.16%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 16  MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 75
           MAI RALC++FLLFV LGLASA RTLLDYDPRT +Y YD P+PRVGYDP H D+SYD AY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 76  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYG----------------- 135
           GGSS+RG+G+GDSALGGSG YEGGG HDYGYG R++DRGVGYG                 
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 136 ----------------------------------------------------NYGGGYGG 195
                                                                 GGGYGG
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 196 VGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGH 239
           VGGHGDGYGNN GG YGDRY PSLGGSGYG+GGKGSGNGYDDHSRG G  DN YGDSHGH
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

[Close]

BLAST of CsaV3_3G001650 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 42.0 bits (97), Expect = 8.0e-04
Identity = 75/186 (40.32%), Postives = 81/186 (43.55%), Query Frame = 0


Query: 61  GYDPGHGD---ESYDKAYGGSSSRGHGIGDSALGGSGYEGGGRHDYGYGDRHND-RGVGY 120
           GY  G G+     Y  A GG +  G G G    GGS Y  GG H  GYG+   +  G G 
Sbjct: 99  GYASGAGEGGGGGYGGAAGGHAGGGGG-GSGGGGGSAYGAGGEHASGYGNGAGEGGGAGA 158

Query: 121 GNYGGG-YGGVGGHGDGYGNN--GGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNG 180
             YGGG YGG GGHG G G    GG   G  YG   GG   G G  G   GY     G  
Sbjct: 159 SGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGS 218

Query: 181 ARDNSYGDSHGHGGRDSGYGSGGGVTGGYGNGGV------------HGGEYDNSKGSGEE 228
               +YG    HGG   GYGSGGG  GGYG G               GG Y    G G  
Sbjct: 219 GGGGAYGGGGAHGG---GYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSG 278

The following BLAST results are available for this feature:

BLAST of CsaV3_3G001650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650024.1	2.4e-119	100.00	hypothetical protein Csa_011560 [Cucumis sativus]	[more]
XP_011652712.1	4.6e-110	100.00	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
XP_008449165.1	7.1e-95	91.52	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA...	[more]
KAE8650023.1	2.4e-79	72.27	hypothetical protein Csa_011563 [Cucumis sativus]	[more]
XP_008449164.1	5.1e-77	64.16	PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] >KA...	[more]

BLAST of CsaV3_3G001650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10495	2.4e-05	43.27	Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of CsaV3_3G001650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1V3	2.2e-110	100.00	Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1	[more]
A0A5A7UHU2	3.4e-95	91.52	Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BMC4	3.4e-95	91.52	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UEU3	2.5e-77	64.16	Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BM26	2.5e-77	64.16	glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of CsaV3_3G001650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46730.1	8.0e-04	40.32	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 19..35 score: 29.41 coord: 195..213 score: 36.84 coord: 154..164 score: 55.68 coord: 127..142 score: 35.94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G001650.1	CsaV3_3G001650.1	mRNA