CsaV3_3G001620 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G001620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	glycine-rich cell wall structural protein 1.8-like
Location	chr3: 1240004 .. 1245980 (+)
RNA-Seq Expression	CsaV3_3G001620
Synteny	CsaV3_3G001620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAATCTTAAAACAATGATAATAAATAAACAACTAGCAAACAAACTAATGGAGATACAAAGCAGTGTATATCTAACTTCACTTTTTTGCATGTGCACCATCTTAACCACTAAGAACAACACACTCCCTGTCTCTATATAAGGAGATCAATGGATACATTCTAAGGCATCCCTTTTCCAATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATACGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCGTAAACAAAGAAAAGAAAAGAAAAAGCTCAAAGTTTTATGGCTAAAATGAGAATGCTTACCCTAATATCATCAATGTGTGTGTGTGTTAGCAAAAAAAAAAAATAAAAGAATTTGGGTAAGAAATGTTATATTAATTATCTTTGAGCTTTTAAGTAATTTGAATGTAATATAATATATATATAAAAAAAGCTAATCCATGTGTTCCAAAGTGAACCAACATGAAGTATATTTTCTCCCTTTGTCATCATGATCATCTTAAACTTGTGGTTATTATGTGGGCTCTCATTATTATTCCAAGATAGCAACGTCGGGATATTCAAATATTTTTCATATGTAATGTCTTAAGACTAAATCACTATGATCTATATGCTTTAATTAAGTTCAAAACTATTTTGGAAGCATTATGATTAATATATTGATTACTTAAATACTATTATATGGTTTTCAAGGTAACTTGATGTTGTTAATAAAAGAAATCTTTAATATTTAATCAGTCCTTTCTCTTAAAATTTAGTAAAAATAAATACTAAAATGGTATGATGTTTTATGGTTGGATTTGGGGTATGTGTTTTGGCTTGTCCCTCTAGTTGTGACTTGTTCAAAATAAGTGTACAATCAAATTCACTTGGGTTATTAAAGACAATTGATAAACAAAAATTGCCAAAACGATAGAGCATAACTATTTAATCGGTATAAAACTTGTACAATCCATTAATCATAATATACTTTTTCTAATTGATCTCTAATTGATCGTACATACTAGTTAGTGTCGATAAAAAACTCAATTTGACGTATAAATATTTGTTTGTTGTAAATGAACATCTAAGTATATTCTTGATTAATTATTCTTATACTAAGAGTAACATTGACCCCTCTATTCTTTAGTATTTGGTTAAAAGAATAAAAAATTAGTAAGTGATGAATCTTAGTGTGCTATAGGTTGATCAACCAATTAAAATTAGTCGTTTCAAGCAATACTTTCGAAAAAATTCATTAAATAGGAGTTATTTAAACTATCAACCCTGAGTTTTTATACATTACAATAAATTTAATCTTTGATGTCGGTCAAAAACTAATATATAGGAGTACAATATAGATCACCAGATCGATATGGAAGACAATGTTATGGAAGATGTTCAATGTTAATCACTTTTATGTTCGTTTTGGTCTTGGCATTATAAATAATTTAAATGGTAGTTTTTGCTCACACTACAAATGTGTTAGACTATTAGTCATCAAATAGTTTGAATTCCTTGTAAAAAAAATTAGTTGAAACAAAAATAAATAATTATCTTTGCATTAAAATAAAATAAAATAAATAAAATAGATTTTTTTGTGAATATTTTGGTCAGGTGTTCTATTTTTTATAATTTCCCATAAAAAATATGTGTAATAAGTTATTTAAAATACTAATAGTATTAATTAGTTTACTTAATAAATCAATTATATCTCTAAATGATATTTTGGTAGATTTAAAAATATTTTGATTCATTTTGCTATATTTGAAAAAGAAACCATAAAATTCTACTTCATATTCGCAATAGATCATGGTAAACTTAGATAGGCATCTATTATTTATATATATGGTGATAGATACTTATGTATCTATATCCAAGCCCATCATCTAAATATTTTCAAATGGTTTTCAATTGAAAACAAATTTCTCAATAAGTAATTAAAAATTAGGTTTTTATTCACTAATAATTATTATTTAAATGTGAACAAATAAAGTTTAGCTCGTATATAATGGGTCAGTAGGTACACTCGGATATCTCCACTAGATGGACACCCCTTAGCACCCTCATTATCTCCGTTTCATTAATATAAAAAATCGAATTGAATACACGAGAAGTAAAGAGAACAACCCAAACAAAAAACAAAGAACTAGAGACAAGCCCAAAACAAGTACAAACAATTAGAAAGCATGAAGAAATTAGTGCTTTAAACCCCTAAACCGCAATGTTACTTAACAAATAAAATTGTTATTTAAAAGTTTGAAGTTATTATTGAGTTTTATTTTAGCAAATTAATCATCTCTTAAATTAAAAATCTCAAACATACATGGAAGATAAGATCAATTAAGCACATGTTGGATGAATTTTGTTCGAATAAAAATTAAAACAACTTATTGTTATCAACTTATAAGTTATATATATGATGATGGTGGTGCAGAGGTGAAAACTTAGTTTGAGATCTCTCCCTACATCTACTATGCTTTTACGTTCTAATGTATTTTGTGGTAAAAAAATCAATTATAAACTTTTAAGAAAAATTTTCATATGTTATTATTTTTTCTCTAAATTCTAAACTAGCCAGGTTATCAACAAAACAAATACCACTAGAGTTTAAGGGATTAGGAAGCATATATGAATATCTCAACTTGGTTAACACGTCGTTTTTAAACATTTCTCATCAGGTTGCTGTTTCAAAAGTGATGCACTGATGTGAAGAAACATATAGGAGAAAAGTGAGATGGAAAGTTAGTATATTGGACAGAGTACATAGTACATAGTAGGTTTATTAATTAATTTATCCAAATGATAATCTCATTACCAAGCACTATGTGATTTAGATATGAATAAAATGTGATCATTTTTCCACCACTATTACATAGCAAATGGGAAAACATCTCATTGTGGTTTGATATTTTAAAAAACAATTATGGTAATGCAAGTCGTCTCATATCCCATAATATTATCTCAGTCTCATGGCGACTGATACAAAAGGACAAAACTAACTTCATTAAAATATGTTCTCTCCTTCCTACACTTTTTAGGTATATATCATTCATATATTAATCACTGCAATTGGTTAGGTGGACTACAAAAACATAGATATAGTCCGAGATAAAATTAAGTACGGTTATATTTTACGAGACTTTTGATGTGTTTGATTACATTTTCATGTGTTTCTTTTAGAAAATAAGTTATTTTGAAAAAACTAAAGTATTTTAAACAATTTTTAGAACAATCAATTTCTTGAAAAATATTTTTTTCTTAATTCAATCTAAGATGGATCCTCAAAATATTTGAGGGTAGTTCTTTTATAAAAGTATTTACACTAGGTTGGTTTATGAAGTAAAATATTGATCGGTAAATTCAAGTTTTAAATTAGAAAAATTGAATATTTTTAAAAATAGAAGAATTGGCTAACTATTTACAACTCATACCAAAATTTTAATACAAATCCAAAGTATCTATTTTTTATTTTATTATTATTATTATTTTTTGCTATAGGATGTAAATACTATCTGTTTTCTTGTAAATTTCTCTTACAATCCTCTACGAGAAAGTCTTAATTTTTATATTTATGATTTATATTATAATATAATTATTTGGAACCATATAATAAATAAAAGGAAAATTGTAAAACATAACATTTGACAAAATATCTTCGTAGAAAAATTTGTTGTGTAATCAATTTTGAGGTTTTGTTATATGGAGCGTAAATATTTTGTCAAATTTTCTATTTGTGAAAAAAAAAACTTATAGGTAATTTGAAAGGTAAGTGATCTTGTTTAAGATCCAAATTTCTTTTATGAAAGTTTAATTTAGAATACATACGAGAAAAATAGATTAATCTAGAATGATAAATGTAAGATAGGTTTGGGAAGTACCAATAAATTTTAGGCATGTGATAGACTATAACTGTGAAGATATATAGTCTATTGCTATCTTGAATGGCTCATTCTTGTTTGAAAATGACCTTATTTAAAACACAACTTTTTTATAAAAGAAAATCCCTTGCATCATTCAAACAATCTTACAAGATCGTATTAGTGGAAGATGAGATAGAATTCTGACATGTGTATTATTAGTATACTTGAATAGTTTCTTATCTAACTTTTGAGCAAGTAGTGGAGAAGCTGATCATGAACCCTAAACCCACCGTATCATTCACTATATAAAGGAGATCACTACATGCATTCTAAGGCATCCCTTCTCCAAATGGCTATCTTTAGAACTTTCTCTTTCGGTTTTCTTTTGTTGGTGAGTTTAGGCTTAGCTTCTGCGACCAGAAGTCTTCTCACCTATGATCCACCACATCACTCTGTATATGATGATCATAACACTAAAGTAGGTTACGGACGTGACCATCATGATCAACCTTATGGTGGTGGTGTTGGTGCTAGTGGAGGATATGGAGCCGGAGCTGGCTCTGGATATGGAGGTGTAGGATACGAACATGACCATCATGATGGATACGAACGTGATCATGATCGATCTTATGGTGGTAGTGCTGGTGGAGGATATGGAGTTGGAGCTGGCTCCTCTCTTGGAGGCTCTGGATATGGAAACGTAGATCATGGGGTTGGTTATAGCAATGGTGGAAGTGGTGGATATGGAGCTGGTGTTGGCTCTGACCTTGGTGGTAGCGGATATGGAAGCGGTAATGGCGGAGCAAGTGGAAGTGGAAATGGTGATTTAGGAGGACGTGGAAAAGGCTACGGTCGCGGTGGTGTTGGAGGAAATGGATATGGAGGTAGAGGAGACCATGGCCGAGTAGTAGGCCATGATGATGTAGTTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGTGGCGTCGGTGGGGGAGCTGGTTATAGCGGTGGAGCAAGTGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGAAGTGGCTATGGCGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAAATAAAAGGGGCTAAAACATCATCTAAAAGCTTATCGTTAAAACGATAATACTTACCTAAATATCAATGTTTGTTAGCAAAAATAAAGAATTTAGGTAAGAATGTTATGTTCCTCTTTTGAATTTTAGTAACTTCAATGAATGTGATATTATAAAAACTAGCTGTTTCATGGGGTTCTAAAGACCAACAAACATGCATGAAATACTGAGTTAATACAACGTACGCCATTCCAAACGTGCTATTTTATGGATTCCAAAGTTGACTTTGAACTAAGGACTAAATAATCCTTTAACACCTTCTAAACACAAATTATTTCACAGAC

mRNA sequence

ATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATACGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGAAGTGGCGTCGGTGGGGGAGCTGGTTATAGCGGTGGAGCAAGTGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGAAGTGGCTATGGCGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Coding sequence (CDS)

ATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATACGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGAAGTGGCGTCGGTGGGGGAGCTGGTTATAGCGGTGGAGCAAGTGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGAAGTGGCTATGGCGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Protein sequence

MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP*

Homology

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BLAST of CsaV3_3G001620 vs. NCBI nr
Match: KAE8650021.1 (hypothetical protein Csa_010076 [Cucumis sativus])

HSP 1 Score: 427.9 bits (1099), Expect = 6.9e-116
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP
Sbjct: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 295

[Close]

BLAST of CsaV3_3G001620 vs. NCBI nr
Match: XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 3.4e-99
Identity = 261/295 (88.47%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           YGSGGGA                                  GSGEEGGYDGGYAP
Sbjct: 241 YGSGGGA----------------------------------GSGEEGGYDGGYAP 261

[Close]

BLAST of CsaV3_3G001620 vs. NCBI nr
Match: BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 7.7e-99
Identity = 260/295 (88.14%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           YGSGGGA                                  GSGEEGGYDGGYAP
Sbjct: 241 YGSGGGA----------------------------------GSGEEGGYDGGYAP 261

[Close]

BLAST of CsaV3_3G001620 vs. NCBI nr
Match: XP_008448673.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 3.6e-88
Identity = 249/297 (83.84%), Postives = 251/297 (84.51%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           SGGGGGYGSGVGG    VDHGVGYGSGGGGGAG GYGGSKGYG GSGGGGGAGYGGGAHG
Sbjct: 181 SGGGGGYGSGVGGAG--VDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           SGYGSGGGAG+                                GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGAGA--------------------------------GSGEEGGYDGGYAP 263

[Close]

BLAST of CsaV3_3G001620 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 9.1e-76
Identity = 229/296 (77.36%), Postives = 235/296 (79.39%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAI +TLSFGFLLLV LGLASA R+LLSYDIPPHRSGYDNYDHPV NPKVGYE       
Sbjct: 9   MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYE------- 68

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
              RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGGGSGY G G+H VGYGSGGGG
Sbjct: 69  ---RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGYAGAGDHGVGYGSGGGG 128

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 129 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSG 188

Query: 181 GGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGS 240
           GGGGYGSG G G G  V+HGVGYGSGGGGG+GSGYGGSKGYGGGSGGGGGAGYGGGAHGS
Sbjct: 189 GGGGYGSGGGAGYGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGAGYGGGAHGS 248

Query: 241 GYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
                                            G G+GSGYGGSGEEGGYDGGYAP
Sbjct: 249 ---------------------------------GGGAGSGYGGSGEEGGYDGGYAP 259

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BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.7e-99
Identity = 261/295 (88.47%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           YGSGGGA                                  GSGEEGGYDGGYAP
Sbjct: 241 YGSGGGA----------------------------------GSGEEGGYDGGYAP 261

[Close]

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.7e-99
Identity = 260/295 (88.14%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           YGSGGGA                                  GSGEEGGYDGGYAP
Sbjct: 241 YGSGGGA----------------------------------GSGEEGGYDGGYAP 261

[Close]

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.7e-88
Identity = 249/297 (83.84%), Postives = 251/297 (84.51%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           SGGGGGYGSGVGG    VDHGVGYGSGGGGGAG GYGGSKGYG GSGGGGGAGYGGGAHG
Sbjct: 181 SGGGGGYGSGVGGAG--VDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 296
           SGYGSGGGAG+                                GSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGAGA--------------------------------GSGEEGGYDGGYAP 263

[Close]

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL
Match: A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.0e-49
Identity = 201/301 (66.78%), Postives = 212/301 (70.43%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISK  S  FLLL+  GLASAAR+LL ++                 P     +DRR GY
Sbjct: 1   MAISKAFSLSFLLLLGFGLASAARTLLGHE-----------------PDAYNPYDRRVGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGS--GGGGGSGYGGVGNHEVGYGSGG 120
             DRDHHD  YGGG+GGGY  GAGAGSSLGGSGYGS  GGGGGSGYGG G+H VGYGSGG
Sbjct: 61  --DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYG G+GS LGG+GYGSGGGGGSGGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYG
Sbjct: 121 GGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYG 180

Query: 181 SGGGGGYGSGVGGGAGV--VDHGVGYGSGGGGGAGSGYGGSK-GYGGGSGG--GGGAGYG 240
           SGGGGGYGSG GGGAG    +HGVGYGSGGGGG+G GYGGSK GYGGGSGG  GGG GYG
Sbjct: 181 SGGGGGYGSGGGGGAGYGPGEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYG 240

Query: 241 -GGAHGSGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGG 294
            GGAHG GY                             GGG GSG GYG SGEEGGYDGG
Sbjct: 241 AGGAHGGGY-----------------------------GGGGGSGGGYGSSGEEGGYDGG 251

[Close]

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL
Match: A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.9e-43
Identity = 213/302 (70.53%), Postives = 221/302 (73.18%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRS--GYDNYDHPVVNPKVGYEHDRRD 60
           MAISK+LS  FLLL+ LGLASAAR+LLSYD PPH S  GY  Y H   NP+VGY+HD  D
Sbjct: 1   MAISKSLSLTFLLLLGLGLASAARTLLSYD-PPHHSDVGY-GYQH---NPRVGYDHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGN-HEVGYGSG 120
           G Y         YGGG+GGGY  GAGAGSSLGGSGYGSGGGGGSGY GVG+    GYGSG
Sbjct: 61  GPY-------GAYGGGSGGGY--GAGAGSSLGGSGYGSGGGGGSGYAGVGDVGGSGYGSG 120

Query: 121 GGGGYGAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGS--GYGGRGDH 180
           GGGG G G G DLG  G GYGSGGGGGSG GYGDLGG GKGYGSGGGGGS  GYG  G H
Sbjct: 121 GGGGSGVGYG-DLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGH 180

Query: 181 GVGYGSGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYG 240
           G GYGSGGGG  GSG GGGA   DHGVGYGSGGGGG G+              GGGAGYG
Sbjct: 181 GKGYGSGGGG--GSGYGGGA---DHGVGYGSGGGGGYGA--------------GGGAGYG 240

Query: 241 -GGAHGSGYGSGGGAGSGSGVGGGA-GYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDG 294
            GG HG GYGSGGG GSG G GGGA GY GGA GSGYGSGGGAGSG G G  GEEGGYDG
Sbjct: 241 PGGDHGVGYGSGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYG-GVGGEEGGYDG 267

The following BLAST results are available for this feature:

BLAST of CsaV3_3G001620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650021.1	6.9e-116	100.00	hypothetical protein Csa_010076 [Cucumis sativus]	[more]
XP_011650342.1	3.4e-99	88.47	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
BAA34064.1	7.7e-99	88.14	glycine-rich protein-2, partial [Cucumis sativus]	[more]
XP_008448673.1	3.6e-88	83.84	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
XP_038905926.1	9.1e-76	77.36	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]

BLAST of CsaV3_3G001620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1U7	1.7e-99	88.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1	[more]
Q9ZWM2	3.7e-99	88.14	Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3BJM7	1.7e-88	83.84	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1CWP3	6.0e-49	66.78	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara...	[more]
A0A6J1E911	2.9e-43	70.53	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CsaV3_3G001620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 117..127 score: 47.73 coord: 90..105 score: 45.31 coord: 144..162 score: 40.79 coord: 6..22 score: 33.09
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G001620.1	CsaV3_3G001620.1	mRNA