CsaV3_2G035970 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGGAAGGAGGATTATTGTTCCTTCCCAGTCTAATGGATGGTGAAAATGAAAACGGAAAAGAAACAATGTGGGGCTCAAATTCAATTCAAACACCACAAAGAAGGAAGATTTGGAACAATAACTCTTTTCTCTTTCTCCCAGATTCCAATACCAACAAAAACAATCATAGCTATTTAGCTCTGTGTGTGTTAATGGAAAAAAAGTGGTTTTTGATTAATTAAGCAAACACCCATTAGAATCAAGATCATCTAAAAGCAAAAAGAGCTAATCTTTTTAATTCCAAATCCTCCAATATCCAACACCCAAATTCCCAAAATCCCAAATCCCAAATACCCAAAAATAAAAATGAGACCAAACTTGGCTTCCTTCGGTTCCTCCACAGATACAGATACTGCCCCCCCTTTACCCACACAAACCTTCGGACACTAAAAACAAACACTACAGAGAGTGACAGTGAGAGCAATCCAGATGGTGGAGACAGAGGCTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGATTATGTTTGAGGGATTTCTGGGGTGTTTTAGCCAAAAGGGGTTGTGGTTTTTACAGTATTAGTTGCTAGAGAAAGTGGTGGTGGTCGCCAGCGGAGGATAAACTCTTGTGGTGGTTATTATGAACAACAGTGGCGGTGGTGGTGAGGATGGGAGTAGGACTGTAGTTTTAGGTGGAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAACTTCAGGCTCTGATCTTCAAATTTATGATGGCAGGTCAGCCTGTTCCACCTGAACTTGTACTCCTTATTCAGAAGAGCTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCAGTAATCTTACTTCGACCCTCTCTTGTTTTTTCTTTCTTTCCTTTTTTTTTTTCCTCTTTCCCTATCTCTCTCTCTTTCTCTCTCTGGGTGTTGTCAGTTTGATTGGTTTCTGTTTGTGTTTGATTTGATTTTAGGGATCTTCTTTACTTCTAGTTTTTCCCTCTTTTCTTTTTTCTAGATGTCATTTTTATGCTACAGTTGTTTTACTTGACTAATGTGTTCATTTGGATTCATGAGTGGTGCTTTTTTGAGATTTCCTTGTTCCAAAACCTTGTGTTTTCACTTCCCTTTTGTCTCTTTTTGTGATTTCCATATATCCTTGAAGCTGTGAATCTGCAAGTTAGGTAAGAAATCATGGCATTTTTCAGCTGAATGAATGAGGGGTTTGGTGTTTAGTGTCTAGTTCTTCACTTGGAGATAACCATAGGAAGATGGAGATGTTTCTCTGGTTTCAAATCCAACTAGCACATGACTAATCTTGTTCAATAATTTCACTTTTTGAGGGTTTCTTTCTGTTATTTGGTTTGTGGGATCTAATAGCCTAATCAATCCCCCAATCTTACGTCTGGAACCAATATCTTCATTGTTTAGCATCTTCTTTTTGTGTATGCAAAGCCTTACAACATGTTTTTGCTATCTGTCTTTATGTTACTTCATGTTTTGATGTGCGAGATTTGTGAGGTTTGAGGTGTAATTTGTGCAGTGGCTTATTGTTCCTTCTACGGGAAGAAGGTGGACCCCGAGCCTGGAAGATGCAGGAGGACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATACCCAGACTCCAAATACTGTGAGCGCCACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCAAACCATGACACAGTCGTCGTCCACTGTGACATCTCTTACTGCTACCGGAAGTAGCAGCACCGGAACTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTGAGCAATTCCCAAACCACTACCACTGGGACCAGTCAGCCTCATTATCCCTTGGACTCCATTCCCTATGGAATCCCAAGCAAAGATTATAGGTATCTTATAAATTCTCACTGCAACTCCATTCTGTCTAATCATATGGTAATGCAAGAATTTATGAACATTCATATCCAATTGCCATGATGGGCTCGGTATTTACTCACGGAAAGCATGATGTTGACCCCCTCCCATCCCTTTAGTAGAAAGTATATGCTTGTATATTAGAGCTGATTTCAAATAGGAGATCAATTTCTGACTTTCCATGGGGGCATTGCATGCATTTATTTACAAGAACAAAAAAAGCTCAAATGTAGCTGTGTTTTGAAGCAGGCACATAATGTTTGCACTCTTGGGGACCATATTGAAGTTATGTGGTGGGAACCCAAAACTGTGCTCTTCTCTGCCATATGTTTTATTGAATATTTCAACAGACCTTTTTCAATTCTTTTGGATCCAATTTTTTGGGCCCTATTCATTTCTTTTCTTCATAATTTCTTTTTTTGTTATCTTAAGTATACATGTTTCACAGACTCTTTTTTCTACTCTCTGCCTATGATGCCTTGCTTTTATGTTTTCTCTAGTTGATGCAACGCTGACATAACAATAAAAATTGTCTTGCTGTTAAAACAACTGTAGTAACCCTATTGGTTATACCTTAGCTCTATGTTAAAAGATATGAAGACAAAGAAAAAGAAATGTCAGTGCTGCCCAATTGTAGTGGTCTGTAAAGTTGAATTTGTCTCTTTTTTTCTCTCTCTCTCTCTCTCTCTATTTGGCTTTTCTCATCTATTCTTTTTTCCCTAAAAATCAACTTGTGTCTGATGTAAACTATGGTAATGTTTCATATTGTGCTGACATTCTGCAATCAATATTTGCTGAAGAGTTGTATCCTTTTCCCTTGCTGTATTCTGATGGTCGTCGGCTTGACTTTTGTGAACTTTAACTGATCAATTTTTTTTCCTTATCTGGTTTATTCTAGGTCAATTCTTGAAAATTTAGGTATGAGCTAGAAAATTCTTACCATTATCTGCTTTCTTTTCATCATGGTCCAACACTTTGGGTCCTAATGTCTGCAGATGGCTGCTTAGTTTAGTTTTGTTGCTCACAGGGAACAACTCTGACAACCATTATATGTTCTTTTGAACTCTTGATATTTAGTTCTAATTGTTCCTACCTGCCTTTTCTACTTTAAAGGAAGCAGTTATATTGGGTGAGCTGACTGATATTATGGGCCTTAGTGGTAAACCAAGCTTAAACTTTCATTTTCTGTCATCTTACTTTTGAGTAATTTTGAGGGTCATACCTTGTGGTTTGGATCAGTGTTAGGTGGTTTGCTCTCTTCTAGTTAGCATCATAGTTCAACATTTTAACCTAACATATTGTAATCTACTTCTTGCTTATTGACTATTTGTCCATTTAAGCACATTTTCTAATATTTTTGCTTTTAATTTCCTTTGTTATCTTCTGTTCAAAAACTAAGAAAGAAAAGTAGTTTTCAAGAACATTTTTTTATCAATTATCCAAAGAAGTTTAGTTATAAGTAATTTTCATAAGCATGATTCTGTGAAACAAAATTGTTGCCAAATAGAGGCATAAGTTTTTAGCTTTCGACTTGGCTTTGAGATCAATCTCTTCACGTTTGAAAGAAGGCATTCGCCACATTTTACCTTTCTCCCCTTTACTACTTTCTCTTAGTGGAGCTACGTGAGGAAAAGGTGCCATGTCTTTGAAGTATTTTGATTTTTCATTAATATAATTTCTTGCTTCAAAATCTCTGATGTACCCAGCAAAAAATAGTGTTAATATATTTGAATCTATCTATTGTATAACTTATATTCTTGCACTTTCAATGTCTTTGATCATAGTCACAAGATGTGTGTGAGAACCACAAAATGCAGCCTTAAACATATTGGGTTAAAGCAATATTTGATATTTCTGTTTTCAACTTCTGATTATCATTGATTCATTTATAATTTTGGTAATATGTGTATTTGAATGTAATCTTCAAAATATCTTAATTAAGTTGCCTCATCCTTCTTTAATGTCTCATCTTTCTATTTTTATTCAGCATCAATCTCCTAATTTGATTTCCCCTCCTACCCTGTTCTCCTTCTGCTTTCTTTAACCCTTTTTGGGATCAATCTAGAGCTCTATATACCCTTAATCACTCAACTCCTTTATCTATCTTGATCACAAGCCGTGGTAGCTGCATTTTGTGAATTACAAAGGGAAGTGGAAGTGAGTTGAAGGGGGGGCATCTTTTAGGGAACTACAAATATAGAGCTTCCACGGTTTTGAACTCGACATTAATTATCCATCTGACATGGTAAATCTAACTGGTCAGAGACTCTGATCAGCTGTTGTGTCATTGTTATAGCATTACGGCATGATGATGTTATTGGAGCTATTTATACAATCAAAAGAATGCGACGGAGCAAGGGGGTTACAGCCCAAAATATCGTCATACTGTCATTGGTTCATAGATGAAAATCAAGTTACTGAAAGCAAATTTGATGCCTGGTCTTCCTAACCCATAGTAGTATATGTTTCTCATAGTGAAAATGGATGAATTGACATGGATCATTGTGTATTGGAATTCAAATTGGCTAGGAAGTTGAGGATATGGATGCAAATTCTTAACTTATTTTTGTATTTGTTGGATTACAGGTATCTTCAAGGGCTTAGACCTGAAGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCTGGAAGCAGCAGGGCTGTTCAAATGGATGCACCGATTGACAACACATGGCCAATGATGTCATCCAGATCCCCTTCTTTCCCAGCATCGAAATCAACTGAAAACTCAATCTTCCAAAGCGGATATGCACAGCATTCGTTCTTTGGTGGGGAATATGCATCTGGGGAAACTCTGAAACAAGAGGGGCAATCTCTTCAGCCGCTCTTTGATGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTAGACGATGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGGCTTCGTCTGACTTATCGACCACAAGTTCAAAATCTCCCCATGGTTAGTACATGCTACTACCACGCTTGTTCGGTTTCTTCCATATTCTTAGTCCATCCTCAATATTGTTCTCCACAGATAATTGATGAAAGCCGCATGATGCTTTGAGAAAATTTTCAAGTTTTATCTCTCAACTTCGATGCCTGTATTTTGAAAGCTAGCTGTTCACATTCGGTATATGTGAGCAACCATGTAGATGGAGAATTCTGTTGTATTCTTGTCTTGTTTTCCCTTTGCTGCTCTGTTTTTATGGGTATCAAAAACTCGGTTATGTGCAAACAGTTTAGTAGAAGCTGAAGGTGAATGTTGTTATTAGGCTTAGAATAATACAAAACTGTGGTTTGAAAGTCTAGATAAAAGTAAGATTATAATGAGGATGACAACAAATGGATATTTCTAGTTATGTTTCTTCTCTACTTTTACGTTTATATATATATCATAAACATATTTTGTTGGACAAAGTTGCTTTGCTTGACAATGGACCTCAGAAACTTGTGCTTCTTTCTGTATTTGAAAAC ATGAACAACAGTGGCGGTGGTGGTGAGGATGGGAGTAGGACTGTAGTTTTAGGTGGAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAACTTCAGGCTCTGATCTTCAAATTTATGATGGCAGGTCAGCCTGTTCCACCTGAACTTGTACTCCTTATTCAGAAGAGCTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCCTTCTACGGGAAGAAGGTGGACCCCGAGCCTGGAAGATGCAGGAGGACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATACCCAGACTCCAAATACTGTGAGCGCCACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCAAACCATGACACAGTCGTCGTCCACTGTGACATCTCTTACTGCTACCGGAAGTAGCAGCACCGGAACTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTGAGCAATTCCCAAACCACTACCACTGGGACCAGTCAGCCTCATTATCCCTTGGACTCCATTCCCTATGGAATCCCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAAGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCTGGAAGCAGCAGGGCTGTTCAAATGGATGCACCGATTGACAACACATGGCCAATGATGTCATCCAGATCCCCTTCTTTCCCAGCATCGAAATCAACTGAAAACTCAATCTTCCAAAGCGGATATGCACAGCATTCGTTCTTTGGTGGGGAATATGCATCTGGGGAAACTCTGAAACAAGAGGGGCAATCTCTTCAGCCGCTCTTTGATGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTAGACGATGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGGCTTCGTCTGACTTATCGACCACAAGTTCAAAATCTCCCCATGATAATTGA ATGAACAACAGTGGCGGTGGTGGTGAGGATGGGAGTAGGACTGTAGTTTTAGGTGGAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAACTTCAGGCTCTGATCTTCAAATTTATGATGGCAGGTCAGCCTGTTCCACCTGAACTTGTACTCCTTATTCAGAAGAGCTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCCTTCTACGGGAAGAAGGTGGACCCCGAGCCTGGAAGATGCAGGAGGACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATACCCAGACTCCAAATACTGTGAGCGCCACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCAAACCATGACACAGTCGTCGTCCACTGTGACATCTCTTACTGCTACCGGAAGTAGCAGCACCGGAACTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTGAGCAATTCCCAAACCACTACCACTGGGACCAGTCAGCCTCATTATCCCTTGGACTCCATTCCCTATGGAATCCCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAAGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCTGGAAGCAGCAGGGCTGTTCAAATGGATGCACCGATTGACAACACATGGCCAATGATGTCATCCAGATCCCCTTCTTTCCCAGCATCGAAATCAACTGAAAACTCAATCTTCCAAAGCGGATATGCACAGCATTCGTTCTTTGGTGGGGAATATGCATCTGGGGAAACTCTGAAACAAGAGGGGCAATCTCTTCAGCCGCTCTTTGATGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTAGACGATGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGGCTTCGTCTGACTTATCGACCACAAGTTCAAAATCTCCCCATGATAATTGA MNNSGGGGEDGSRTVVLGGTASGMMGMNRSPFTVLQWQELELQALIFKFMMAGQPVPPELVLLIQKSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTATGSSSTGTGSFHGLPLNALSNSQTTTTGTSQPHYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPIDNTWPMMSSRSPSFPASKSTENSIFQSGYAQHSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHDN* Homology
BLAST of CsaV3_2G035970 vs. NCBI nr
Match: XP_011650059.2 (growth-regulating factor 4 [Cucumis sativus] >KAE8652338.1 hypothetical protein Csa_021794 [Cucumis sativus]) HSP 1 Score: 667.2 bits (1720), Expect = 7.7e-188 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. NCBI nr
Match: XP_008462790.1 (PREDICTED: growth-regulating factor 4-like [Cucumis melo]) HSP 1 Score: 665.6 bits (1716), Expect = 2.2e-187 Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. NCBI nr
Match: TYK00977.1 (growth-regulating factor 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 661.4 bits (1705), Expect = 4.2e-186 Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. NCBI nr
Match: KAA0066299.1 (growth-regulating factor 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 634.4 bits (1635), Expect = 5.5e-178 Identity = 328/350 (93.71%), Postives = 330/350 (94.29%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. NCBI nr
Match: XP_038902024.1 (growth-regulating factor 4-like [Benincasa hispida]) HSP 1 Score: 625.2 bits (1611), Expect = 3.4e-175 Identity = 319/337 (94.66%), Postives = 323/337 (95.85%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64 Identity = 163/368 (44.29%), Postives = 223/368 (60.60%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy Swiss-Prot
Match: Q6AWY6 (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.6e-63 Identity = 152/338 (44.97%), Postives = 205/338 (60.65%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy Swiss-Prot
Match: Q6AWY4 (Growth-regulating factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF5 PE=2 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 5.2e-62 Identity = 146/339 (43.07%), Postives = 193/339 (56.93%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy Swiss-Prot
Match: A0A060D764 (Growth-regulating factor 1 OS=Zea mays OX=4577 GN=GRF1 PE=1 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.5e-56 Identity = 160/388 (41.24%), Postives = 217/388 (55.93%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.6e-40 Identity = 137/407 (33.66%), Postives = 186/407 (45.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy TrEMBL
Match: A0A1S3CHP3 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103501080 PE=3 SV=1) HSP 1 Score: 665.6 bits (1716), Expect = 1.1e-187 Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy TrEMBL
Match: A0A0A0LN73 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_2G432230 PE=3 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 3.2e-187 Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy TrEMBL
Match: A0A5D3BNV9 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001650 PE=3 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 2.1e-186 Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy TrEMBL
Match: A0A5A7VLW4 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003520 PE=3 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 2.7e-178 Identity = 328/350 (93.71%), Postives = 330/350 (94.29%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. ExPASy TrEMBL
Match: A0A6J1D4F3 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111017214 PE=3 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 4.2e-171 Identity = 312/341 (91.50%), Postives = 321/341 (94.13%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. TAIR 10
Match: AT3G13960.1 (growth-regulating factor 5 ) HSP 1 Score: 146.7 bits (369), Expect = 3.3e-35 Identity = 99/267 (37.08%), Postives = 137/267 (51.31%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. TAIR 10
Match: AT2G36400.1 (growth-regulating factor 3 ) HSP 1 Score: 139.0 bits (349), Expect = 6.8e-33 Identity = 112/304 (36.84%), Postives = 155/304 (50.99%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. TAIR 10
Match: AT2G06200.1 (growth-regulating factor 6 ) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-32 Identity = 71/124 (57.26%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. TAIR 10
Match: AT3G52910.1 (growth-regulating factor 4 ) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-28 Identity = 113/320 (35.31%), Postives = 155/320 (48.44%), Query Frame = 0
BLAST of CsaV3_2G035970 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 ) HSP 1 Score: 122.1 bits (305), Expect = 8.6e-28 Identity = 108/331 (32.63%), Postives = 159/331 (48.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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