CsaV3_2G035540 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G035540
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 23830173 .. 23830839 (+)
RNA-Seq ExpressionCsaV3_2G035540
SyntenyCsaV3_2G035540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTCGTCAATAATATCACAGAAGAGGACCATTTGGCTTTGGCTTCTCATAGAGCCTCCCTTCTTTTCCTCAACAACAAAAATTTCATTGAAATCCTTGCAAAGGATCTTAGGGTGATTCAACGTCCTTTTCAGAATCCTAAGCAATTTCCAAGTTTCCTTCTAGTTCTATTTGGTTGGATTACCATACACCCCGCTAAATCTCCAAGGTTCATTATCATCAACAATTATAACATCAATATATGGCCTTAGGAAAAAGATGATATGATAAGCAAAGACTTTTGAAGCCACAACAATATCAGGCTTCCACTATTACCTCTACTTAGCACAATAAAGCAGCAATCAAACCTCAACACTCACTCAACTTTCTCGCTAATCAAATTTTCACACATGGTCTCAGAAAAAATGATAACTTGAGGATTTTCCCATTTGACTATATTTCAAAGGGCATTGAGTGTTCAAGAGTTTTCTAATCCTTAAACGTTCTAACATAGAATAATCATGGGGTTTGGTGGGGCTGACTTTCAGCCTCCGCCGATATCCTTCCAGAAACCATGGAGTAATTGGTTATGCCTTTCTTCTTTTTTTCCTCTGTGTCGCTGTTCTTGGATTCATGTTGTATGTCATGGTTCACCTTTTCAATTTGATTATGATCAATACCTGA

mRNA sequence

ATGGAACTCGTCAATAATATCACAGAAGAGGACCATTTGGCTTTGGCTTCTCATAGAGCCTCCCTTCTTTTCCTCAACAACAAAAATTTCATTGAAATCCTTGCAAAGGATCTTAGGGTGATTCAACGTCCTTTTCAGAATCCTAAGCAATTTCCAAGTTTCCTTCTAGTTCTATTTGGTTGGATTACCATACACCCCGCTAAATCTCCAAGCCTCCGCCGATATCCTTCCAGAAACCATGGAGTAATTGGTTATGCCTTTCTTCTTTTTTTCCTCTGTGTCGCTGTTCTTGGATTCATGTTGTATGTCATGGTTCACCTTTTCAATTTGATTATGATCAATACCTGA

Coding sequence (CDS)

ATGGAACTCGTCAATAATATCACAGAAGAGGACCATTTGGCTTTGGCTTCTCATAGAGCCTCCCTTCTTTTCCTCAACAACAAAAATTTCATTGAAATCCTTGCAAAGGATCTTAGGGTGATTCAACGTCCTTTTCAGAATCCTAAGCAATTTCCAAGTTTCCTTCTAGTTCTATTTGGTTGGATTACCATACACCCCGCTAAATCTCCAAGCCTCCGCCGATATCCTTCCAGAAACCATGGAGTAATTGGTTATGCCTTTCTTCTTTTTTTCCTCTGTGTCGCTGTTCTTGGATTCATGTTGTATGTCATGGTTCACCTTTTCAATTTGATTATGATCAATACCTGA

Protein sequence

MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFGWITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT*
Homology
[Close]
BLAST of CsaV3_2G035540 vs. NCBI nr
Match: KGN63307.1 (hypothetical protein Csa_022152 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG 60
           MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG
Sbjct: 1   MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG 60

Query: 61  WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT 116
           WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT
Sbjct: 61  WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT 115

[Close]
BLAST of CsaV3_2G035540 vs. ExPASy TrEMBL
Match: A0A0A0LR66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427320 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.9e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG 60
           MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG
Sbjct: 1   MELVNNITEEDHLALASHRASLLFLNNKNFIEILAKDLRVIQRPFQNPKQFPSFLLVLFG 60

Query: 61  WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT 116
           WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT
Sbjct: 61  WITIHPAKSPSLRRYPSRNHGVIGYAFLLFFLCVAVLGFMLYVMVHLFNLIMINT 115

The following BLAST results are available for this feature:
BLAST of CsaV3_2G035540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63307.11.8e-56100.00hypothetical protein Csa_022152 [Cucumis sativus][more]
BLAST of CsaV3_2G035540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G035540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR668.9e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427320 PE=4 SV=1[more]
BLAST of CsaV3_2G035540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G035540.1CsaV3_2G035540.1mRNA