|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTGTTTCTTAATCTTGGCGTCAATGAAGCTATTCTGAATCTGCGTGGGAACGACGCAGTGAAGACAGGTGAAGAAGTTAGTTCAATTTAGACGAAATAGAACAAGTGAACAGTACAGCGCATGACCTTCACCATCATCGCCGCAGGAAAAATGGAATCAAAAGAGATGGGGAGAGAGAGATTGGCAGAAAAAACATTGAAAGAGGAGAAGTGTCACGGAACGACGGTCAGCAGAGGGGAGTGGGTGAATACTGGAAGGCGGCGCTGAGTTGTTGCGGTTGTTGGTTATCGAGAGAGAAGAGAGAAGAGAGAAGGGAGAGGAGGAGCTTACCGGCAGCGAACAACGACTGGACTCAGGCTGGTTGGCAACCGGTCGGTGCTACCTGTGGCGCTGCCTTTTGGTGCTTCTTTTCACTCAAATGTTTACTCTTAATTTAG mRNA sequence ATGTTGTTTCTTAATCTTGGCGTCAATGAAGCTATTCTGAATCTGCGTGGGAACGACGCAGTGAAGACAGAACAAGTGAACAGTACAGCGCATGACCTTCACCATCATCGCCGCAGGAAAAATGGAATCAAAAGAGATGGGGAGAGAGAGATTGGCAGAAAAAACATTGAAAGAGGAGAAGTGTCACGGAACGACGGTCAGCAGAGGGGAGTGGGTGAATACTGGAAGGCGGCGCTGAGTTGTTGCGGTTGTTGGTTATCGAGAGAGAAGAGAGAAGAGAGAAGGGAGAGGAGGAGCTTACCGGCAGCGAACAACGACTGGACTCAGGCTGGTTGGCAACCGGTCGGTGCTACCTGTGGCGCTGCCTTTTGGTGCTTCTTTTCACTCAAATGTTTACTCTTAATTTAG Coding sequence (CDS) ATGTTGTTTCTTAATCTTGGCGTCAATGAAGCTATTCTGAATCTGCGTGGGAACGACGCAGTGAAGACAGAACAAGTGAACAGTACAGCGCATGACCTTCACCATCATCGCCGCAGGAAAAATGGAATCAAAAGAGATGGGGAGAGAGAGATTGGCAGAAAAAACATTGAAAGAGGAGAAGTGTCACGGAACGACGGTCAGCAGAGGGGAGTGGGTGAATACTGGAAGGCGGCGCTGAGTTGTTGCGGTTGTTGGTTATCGAGAGAGAAGAGAGAAGAGAGAAGGGAGAGGAGGAGCTTACCGGCAGCGAACAACGACTGGACTCAGGCTGGTTGGCAACCGGTCGGTGCTACCTGTGGCGCTGCCTTTTGGTGCTTCTTTTCACTCAAATGTTTACTCTTAATTTAG Protein sequence MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGEVSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCGAAFWCFFSLKCLLLI*
Homology
BLAST of CsaV3_2G034940 vs. NCBI nr
Match: KGN63251.1 (hypothetical protein Csa_021830 [Cucumis sativus]) HSP 1 Score: 280.4 bits (716), Expect = 8.2e-72 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 1 MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE 60
MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE
Sbjct: 1 MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE 60
Query: 61 VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG 120
VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG
Sbjct: 61 VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG 120
Query: 121 AAFWCFFSLKCLLLI 136
AAFWCFFSLKCLLLI
Sbjct: 121 AAFWCFFSLKCLLLI 135
BLAST of CsaV3_2G034940 vs. ExPASy TrEMBL
Match: A0A0A0LT89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418870 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 4.0e-72 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 1 MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE 60
MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE
Sbjct: 1 MLFLNLGVNEAILNLRGNDAVKTEQVNSTAHDLHHHRRRKNGIKRDGEREIGRKNIERGE 60
Query: 61 VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG 120
VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG
Sbjct: 61 VSRNDGQQRGVGEYWKAALSCCGCWLSREKREERRERRSLPAANNDWTQAGWQPVGATCG 120
Query: 121 AAFWCFFSLKCLLLI 136
AAFWCFFSLKCLLLI
Sbjct: 121 AAFWCFFSLKCLLLI 135
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN63251.1 | 8.2e-72 | 100.00 | hypothetical protein Csa_021830 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LT89 | 4.0e-72 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418870 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
