CsaV3_2G034290 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGCTGTGTCAGACAACTTATACCATATGAATCACATGGTAGATCCTCTGATGGTCCTCATCTTGTTCACAAGGTGGACCCATTGACGGTCCTCATTTTGTTATAGCTATTTGAGCTAGGTAGGTAACCTACCGATCATCTTTTCGAGAGATGGAATACAATTTGTAGAAGTCTCATCTCACTAAAATGTCTTAGTGTATTTAACCTGACCGAATTACACACGTGACAAAAATAACCCATTTGAAAGGTGGGAATTGTTAGTTGTTGGTTGGAGAGTTTATGAGGTATGAAATGAATAAATAACATGCATGCAAAGAAAAACAGGATTTAACTTGTACAACGTCCACTGTATATATACTACTGAAGATCAAAAGCCGTGTGGATCAAATGACACAAAAACAAATATTGTCACAATCTGCATGCCTTTTGTTTTTGGTTGTCTCAGTTGAGTCATTTAACCATATACTGGAAATTAAGTCGAGGTTATTTAAGGAGATCATTTGTATATATTCCCATAAAGTGGTACTTGGCAAAAGAATGTGAAGTTTCAGAGAGTATATGCCACAGCTCCAACGCTTGGACACCTTTAAACATACACATGTCTTGTTGACAACAAAATTAAATGTGTTTATGCGTTAAAAAAATAAGGAACAAACACATGTATCACTCCCCAACCTCAACTATTAGCCTCTATAAATAGCAGCCAAAACCCAACTACTTTTCCCATCATCACAAACCACCTTTTTTTGTAGAGTGGGAGTTGGTTTTGCTGTGAAGAGAGAATGAAGTCTAAAGGCTTTCTTTTTGGGTGTCTTCTTCTTGTATCTGCTCTGGCCGTTTCATGGGCTGTAGAATCCCGCACACAGCCTATCCAACACGACCAACAAGGTATATTCTAAGTTATTTATTTAATTTGTTTTGGAAAAATAGCAATATGTGGGTATTTGGCGTTTAAATTTTTTAAATCATACTTTTAGAGACTAGAGAATTAAAAAAAAATTAATTTAATTTAAAATTTCATGTAATTATTAAAAATACTAATATTATTAAAAAATATTTAAGATCTTGTATAATTATTAAAAATACTAATAATAATAAAGTAAAAATGATGTAAAGTTATTTGGGAAACTCCATTAGTAACCTACTAACATGCCATTTGTGCATTTAAACTTTTATCCAAACTTCATTCGATAGAATGAGAATGATAGTAAATATCAGTGCATATTTAATAGAAGTCTATATAAGTTTATATTTGTGTACCTATCGTTAATAGAATATGATATTAAATATTTTTTTTAAAACTTTTATCCTCTTAAAAAATTCTCCATCTCTGTATCATTATCTCTTACCCTATGCGTAAGAGAGGAGGATGCACTAAACCATTAGTTCTTTGTGCTGTTTTCTTTGTGAGTGAGAGACGACGATACACCTAGGTGTCATCCATCACAAAATTACTTTTTCACTTGAGTGTCTACACGTACCACGCAAATAATTGTAGTCCCAAAATTACTCTTTTTCTTATATTTTATTCCTATAAAGTGTTATAAATTACTTCACAAATAATTAATTAGAGCAATAAAAACAATTTGTATAAAAATTATAACAATCAATACTTAAAATACATCCATGACTAGCTAGGATGCTTCTATCTAAGAACTCAGGGAATGTAAAACCTTCAACTGCTCAGGGAAAAATTAATGAAAAATTGCTGTGCAGTAATTTATTTTTGAAACAATTATTAAAAAGTTATTTTCTGTACGGAAAGAATGAGATTATGGCAGGTAACAAGTTTTGGTGAAACTTCCAAAAATAAATGCTACCCCACTATTGTTTTATGAATATTTAGAAATACTTGTTTTGGTCCTATTACATTTTCTATGTCCTGTTTACCATATTTGGTATGCAGTGGCCCATGACGTAGAAGAGGCTAAACATAGAAGTGGCAGCGGGGGCGGCGGCAGTTACGGAGGAGGCGGCGGAGGATCTAGCGGTGGTGGGTCTGGAGGAGGTGGGTCAGGCGGCGGTGGCTATGGTGGCGGTGGCCATGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGCGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAGGGCGGTGGAGGGTCTGGTGGAGGCGGTCAGGGAGGAGGTCACGGGGGTGGAGGGTCTGGTGGAGGTGGTCAAGGAGGCGGACATGGGGGAGGTGGACAAGGAGGAGGGGGGGGATATGGCGGAGGAGGAGGAGGGTACAAGAAGCCAAGCAAGGATTGA ATGAAGTCTAAAGGCTTTCTTTTTGGGTGTCTTCTTCTTGTATCTGCTCTGGCCGTTTCATGGGCTGTAGAATCCCGCACACAGCCTATCCAACACGACCAACAAGTGGCCCATGACGTAGAAGAGGCTAAACATAGAAGTGGCAGCGGGGGCGGCGGCAGTTACGGAGGAGGCGGCGGAGGATCTAGCGGTGGTGGGTCTGGAGGAGGTGGGTCAGGCGGCGGTGGCTATGGTGGCGGTGGCCATGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGCGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAGGGCGGTGGAGGGTCTGGTGGAGGCGGTCAGGGAGGAGGTCACGGGGGTGGAGGGTCTGGTGGAGGTGGTCAAGGAGGCGGACATGGGGGAGGTGGACAAGGAGGAGGGGGGGGATATGGCGGAGGAGGAGGAGGGTACAAGAAGCCAAGCAAGGATTGA ATGAAGTCTAAAGGCTTTCTTTTTGGGTGTCTTCTTCTTGTATCTGCTCTGGCCGTTTCATGGGCTGTAGAATCCCGCACACAGCCTATCCAACACGACCAACAAGTGGCCCATGACGTAGAAGAGGCTAAACATAGAAGTGGCAGCGGGGGCGGCGGCAGTTACGGAGGAGGCGGCGGAGGATCTAGCGGTGGTGGGTCTGGAGGAGGTGGGTCAGGCGGCGGTGGCTATGGTGGCGGTGGCCATGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGCGGTGGAGGATCTGGCGGAGGCGGTCAAGGAGGAGGTCATGGTGGTGGAGGATCTGGCGGAGGCGGTCAGGGCGGTGGAGGGTCTGGTGGAGGCGGTCAGGGAGGAGGTCACGGGGGTGGAGGGTCTGGTGGAGGTGGTCAAGGAGGCGGACATGGGGGAGGTGGACAAGGAGGAGGGGGGGGATATGGCGGAGGAGGAGGAGGGTACAAGAAGCCAAGCAAGGATTGA MKSKGFLFGCLLLVSALAVSWAVESRTQPIQHDQQVAHDVEEAKHRSGSGGGGSYGGGGGGSSGGGSGGGGSGGGGYGGGGHGGGGQGGGHGGGSGGGGQGGGHGGGGSGGGGQGGGHGGGGSGGGGQGGGHGGGGSGGGGQGGGGSGGGGQGGGHGGGGSGGGGQGGGHGGGGQGGGGGYGGGGGGYKKPSKD* Homology
BLAST of CsaV3_2G034290 vs. NCBI nr
Match: XP_011650209.2 (acanthoscurrin-1 [Cucumis sativus] >KAE8652265.1 hypothetical protein Csa_021842 [Cucumis sativus]) HSP 1 Score: 200.3 bits (508), Expect = 1.5e-47 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. NCBI nr
Match: TYK11861.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 1.4e-27 Identity = 175/206 (84.95%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. NCBI nr
Match: KAA0053270.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 2.2e-25 Identity = 175/209 (83.73%), Postives = 177/209 (84.69%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. NCBI nr
Match: XP_016901857.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo]) HSP 1 Score: 116.3 bits (290), Expect = 2.9e-22 Identity = 159/195 (81.54%), Postives = 163/195 (83.59%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. ExPASy TrEMBL
Match: A0A0A0LT28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G407830 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.2e-42 Identity = 179/194 (92.27%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. ExPASy TrEMBL
Match: A0A5D3CJ77 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00080 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 6.6e-28 Identity = 175/206 (84.95%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. ExPASy TrEMBL
Match: A0A5A7UDI4 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00670 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25 Identity = 175/209 (83.73%), Postives = 177/209 (84.69%), Query Frame = 0
BLAST of CsaV3_2G034290 vs. ExPASy TrEMBL
Match: A0A1S4E0T9 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103496044 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22 Identity = 159/195 (81.54%), Postives = 163/195 (83.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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