CsaV3_2G033990 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G033990
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	actin related protein 2
Location	chr2: 22524651 .. 22527497 (-)
RNA-Seq Expression	CsaV3_2G033990
Synteny	CsaV3_2G033990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCAAGAAATTTGAAAATTTTACCACTCACTGCTACTACACTTGCCGTTTACAAGTAACTTCTTAATGCTGAATTTATGCATTTTGTGTATCGCTGAATTTGAATTTCTTGTTGGTTATAATTTTAAACCAATATTTTGTTGAAATTTTCATAATCTTACATAGACCTTTTAAATCTTCACTATAATTAACATCTGCTACTTCTTACTTCTTACCTCTTACCTCTTACCTCTGGATATTCAAGTTTCCATCTCTTACGATTGAATATGCTAATACCTTCAAATTAAAGAAACTTAAAAGACAGAGATTAGCCCCCATCATTTCACTTCTTCCTTCATCTCGGTTGGAAAGCCTCAAGATTAGCCCAGGATCAAAAGTGTCAAGTGCAATATGAGTCACCAAAAACGGAGTTAAATCCCCCCCAAAAAAAAGCTATTGATTTGGAATTGACCAAAAATAATAAATCTTTGAGATACAAAAGACATATGTTACAATTGAACCACTCAATTTGATTTGCATATCCCACAACAATAATTACGATACCTGGATAAATTTTTCTTTTAGAATATGTCTTCATATGTGATATACCTTATCTTCAATTATGTAGGTTTCTTTTGCATCTGATATACCTTATTTTGAATTACATATGTCTCTTCGATATACCTTATCTTGTTTCGACAAGTATCTTATATCGCACATATCAATTAAAATCATAATGCTTGTGTGTGTTGATAGACCTTATCTTGAGTATATCACATAGGTATATTTGAACTTTAGATACATTATATTTCCAAATAATTAAAAAATAAAGTAGAGAAGAAAATATTCCCAAATAAAACGGTTAATACATCGTTGGTAATGTATAAATTTCAAAACAATTAAAATTTTCAAATAGGTTCAAATGTACAAGTTCTAATATTATGACGGATTCTCTTACAACGACTACATTTTAAGCTTTTTGAAACATTACCATAGAAAGAATCCTTATTTTTGGAGGCCTTCGCGCTGGATGTATAAATATTGGAAGCAATACATTATCATTCACATCCACACCACTCCAATCTGTATGGTTGAAGTAAACCACCATAAGTGGTAGATAATAAACTAGCACACAATAATAGTATGAAAGGAATAGATGAAGAAAAGATGATGATATTGAGATGATTTAGAGAAATATATAAATAAAGATAGGAAAGAATAATTATGATTTTAATAAAGGGAGAAGAAATAGATACATAATCGAAGAAACAAATTGTTTTTCCCATAAAAGAAAGAATAAGAAGAATAGAAGAAGACAGTAAAAAGAGAAGGAAAGGAAGAGAAGAAACCTAAAAGAAAGAAGCAAAAGAGAGAAGAGAAGAAGGATGAAGAAAAATGGTGGAGAAGACGAGAAGAAAACGAAGAGAAGATGAGAGAAAGTGGAGGACGGTGGTGCATATTCAAATAATACCAAGAGGTCAATTCTAAAATAGAAAATATCAACCAAAATTAGAAGTTGCTATATTTACAAAATTGAAAAGGTTAGGGCTATTATTGCTAATTTGTATTTTGATTGTACCACCTAATATAATTTTCATTTTACTATTTTTGTTTATCGTTTCTCTAATCAACATCAAGTTGAGGCTCAAGCTTTGAAGCCTATACTAAGCTGATGTTTATACCAACCAAAGTCATATATTTTTCTTAATCGAAGAGGGTAGGGATTTAGATTTGAGAATATGGGAATTATAAGAATTTGAAGAACAAGATCCCTTGACTTGGAATTGCAATTCAGCAAGAACGAAATTGAGATTGGTAAAGATTGCTATTTTGAAGTACTAAACTTTGTATTTGGTGGCATAGACTGACCATCTCAATTCGTTGACGCTTTCCCTACTTTCCTTAACTTCAACTTCAAGCCATCGCAACCCAACCAAATCAATCGGAGTCTCGGAAAAGTGGCACCCACAACCATCTGCTACTCTGCCGCATCGCCCCCGCATGGATAATCGGAATGTTGTCGTCTGCGACAATGGCACTGGGGTATCTTCTTCTTCTTCTTCTTTTTAATCACTTCTTCACCCACTTGCTTGATCTTGCATGCCCCTGTGTAAATCTACCCATTATTTCATTTTCTTCTGCTTCAGATTCGTGTTGTTCGCCTCACCTGTCCCAGTGGAGCACACTTTTATTTAGTGTGTTTTGGTTGGTTGGCTAATATTTTTTTGTTGATTAATTGCAGTATGTAAAATGTGGATTTGCTGGGGAGAATTTTCCAACTTCTGTGTTTCCCTGTGTGGTTGGAAGGCCGCTGCTTCGCTATGAAGAATCACTCATCGAACAGGAGTTGAAGGTTTGTGATTTCCATGTGTTTTATTAGTTCTTTTCTGGGTGTGAAAAAGGAAGAGCTGGTATGATTGTTTGTCAATGGTCGGGAAATTTCAACTTTCAATCCGTTTGATAGCTATGATTGCATTTTCTACTCAGAAAAACAGTTTGATGTGTTGATATCTTGGGTTCTGTAAAATGTGGGTAGAAATGATCATTTCCCATGCAGCGATTATCTTTTATGAGTGAGAATATTGTACTGTAGTGAACTGAAGAAATTTTCAATCAGGATGTCACATTTTCATAGAAAGGATCTTCATGAGATTAGTTACTATTCTTTGATTATTCATTCTCTTCTCAAGTCTTGTTGCTGAATTCCTCCTAGGACATTGTTGTTGGAGAAAGCTGTGCTGATTTGCGCCATCAGCTTGATATAACGTATCCTGTTCATAATGGTATCGTACAAAATTGGGATGATATGTGTCATGTGTGGGATCATGCATTTTTCAACGAACTCAAGGAAAGAATTTTCTAG

mRNA sequence

ATGAATTTCAAGAAATTTGAAAATTTTACCACTCACTGCTACTACACTTGCCGTTTACAAACTGACCATCTCAATTCGTTGACGCTTTCCCTACTTTCCTTAACTTCAACTTCAAGCCATCGCAACCCAACCAAATCAATCGGAGTCTCGGAAAAGTGGCACCCACAACCATCTGCTACTCTGCCGCATCGCCCCCGCATGGATAATCGGAATGTTGTCGTCTGCGACAATGGCACTGGGTATGTAAAATGTGGATTTGCTGGGGAGAATTTTCCAACTTCTGTGTTTCCCTGTGTGGTTGGAAGGCCGCTGCTTCGCTATGAAGAATCACTCATCGAACAGGAGTTGAAGGACATTGTTGTTGGAGAAAGCTGTGCTGATTTGCGCCATCAGCTTGATATAACGTATCCTGTTCATAATGGTATCGTACAAAATTGGGATGATATGTGTCATGTGTGGGATCATGCATTTTTCAACGAACTCAAGGAAAGAATTTTCTAG

Coding sequence (CDS)

ATGAATTTCAAGAAATTTGAAAATTTTACCACTCACTGCTACTACACTTGCCGTTTACAAACTGACCATCTCAATTCGTTGACGCTTTCCCTACTTTCCTTAACTTCAACTTCAAGCCATCGCAACCCAACCAAATCAATCGGAGTCTCGGAAAAGTGGCACCCACAACCATCTGCTACTCTGCCGCATCGCCCCCGCATGGATAATCGGAATGTTGTCGTCTGCGACAATGGCACTGGGTATGTAAAATGTGGATTTGCTGGGGAGAATTTTCCAACTTCTGTGTTTCCCTGTGTGGTTGGAAGGCCGCTGCTTCGCTATGAAGAATCACTCATCGAACAGGAGTTGAAGGACATTGTTGTTGGAGAAAGCTGTGCTGATTTGCGCCATCAGCTTGATATAACGTATCCTGTTCATAATGGTATCGTACAAAATTGGGATGATATGTGTCATGTGTGGGATCATGCATTTTTCAACGAACTCAAGGAAAGAATTTTCTAG

Protein sequence

MNFKKFENFTTHCYYTCRLQTDHLNSLTLSLLSLTSTSSHRNPTKSIGVSEKWHPQPSATLPHRPRMDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCADLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELKERIF*

Homology

[Close]

BLAST of CsaV3_2G033990 vs. NCBI nr
Match: KAE8652258.1 (hypothetical protein Csa_022649 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 1.7e-95
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MNFKKFENFTTHCYYTCRLQTDHLNSLTLSLLSLTSTSSHRNPTKSIGVSEKWHPQPSAT 60
           MNFKKFENFTTHCYYTCRLQTDHLNSLTLSLLSLTSTSSHRNPTKSIGVSEKWHPQPSAT
Sbjct: 1   MNFKKFENFTTHCYYTCRLQTDHLNSLTLSLLSLTSTSSHRNPTKSIGVSEKWHPQPSAT 60

Query: 61  LPHRPRMDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIV 120
           LPHRPRMDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIV
Sbjct: 61  LPHRPRMDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIV 120

Query: 121 VGESCADLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELKERIF 167
           VGESCADLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELKERIF
Sbjct: 121 VGESCADLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELKERIF 166

[Close]

BLAST of CsaV3_2G033990 vs. NCBI nr
Match: XP_031737195.1 (actin-related protein 2 [Cucumis sativus] >XP_031737196.1 actin-related protein 2 [Cucumis sativus] >XP_031737197.1 actin-related protein 2 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. NCBI nr
Match: XP_008441307.1 (PREDICTED: actin-related protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. NCBI nr
Match: XP_023544804.1 (actin-related protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 8.8e-52
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNR VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRKVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. NCBI nr
Match: XP_022956707.1 (actin-related protein 2 [Cucurbita moschata] >XP_022990529.1 actin-related protein 2 [Cucurbita maxima] >KAG6602689.1 Actin-related protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.2 bits (544), Expect = 8.8e-52
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNR VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRKVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot
Match: Q9LSD6 (Actin-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-50
Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDN+NVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL+EQ++KDIVVGE+C+
Sbjct: 1   MDNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCS 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           +LRHQLDI YPVHNGIVQNWDDM HVWDHAF+NELK
Sbjct: 61  ELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot
Match: A2YUL5 (Actin-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ARP2 PE=3 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 82/96 (85.42%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MD+ NVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL EQEL DIVVG +CA
Sbjct: 1   MDSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLD++YPV NGIVQ+WDDM H+WDHAF++ELK
Sbjct: 61  DLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot
Match: Q6Z256 (Actin-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP2 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 82/96 (85.42%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MD+ NVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL EQEL DIVVG +CA
Sbjct: 1   MDSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLD++YPV NGIVQ+WDDM H+WDHAF++ELK
Sbjct: 61  DLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot
Match: O96621 (Actin-related protein 2 OS=Dictyostelium discoideum OX=44689 GN=arpB PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-32
Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MD+  V+V DNGTG+VKCGFAG NFPT++FP +VGRP+LR EE +   E+KDI+VG+  A
Sbjct: 1   MDSNKVIVMDNGTGFVKCGFAGANFPTAIFPSMVGRPILRSEEKVENVEIKDIMVGDEAA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
            LR  L ITYP+ NGI++NWDD+ HVWD+A   +LK
Sbjct: 61  KLRSMLQITYPLENGIIRNWDDITHVWDYALKEKLK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot
Match: P53487 (Actin-related protein 2 OS=Acanthamoeba castellanii OX=5755 GN=arp2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.9e-31
Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 68  DNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCAD 127
           D+  V+VCDNGTG+VKCGFA  NFP S+FP +VGRP+LR EE     E+KDI+VG+  + 
Sbjct: 3   DSSKVIVCDNGTGFVKCGFARSNFPASIFPSMVGRPILRSEEKFDNVEIKDIMVGDEASK 62

Query: 128 LRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           LR  L ITYP+ NGIV+NW+D  HVW++ FF +LK
Sbjct: 63  LRSMLQITYPLDNGIVRNWEDAEHVWNYTFFEKLK 97

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL
Match: A0A1S3B342 (actin-related protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485464 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.6e-53
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL
Match: A0A6J1JSA3 (actin-related protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111487379 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNR VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRKVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL
Match: A0A6J1GX50 (actin-related protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111458342 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNR VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRKVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL
Match: A0A6J1C0Y8 (actin-related protein 2 OS=Momordica charantia OX=3673 GN=LOC111006424 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.8e-51
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           M +RNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MASRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL
Match: A0A6J1JYK0 (actin-related protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489043 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.8e-50
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDNR V+VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA
Sbjct: 1   MDNRKVIVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           DLRHQLDITYPVHNG+VQNWDDM HVWDHAFFNELK
Sbjct: 61  DLRHQLDITYPVHNGVVQNWDDMGHVWDHAFFNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. TAIR 10
Match: AT3G27000.1 (actin related protein 2 )

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51
Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 67  MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 126
           MDN+NVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL+EQ++KDIVVGE+C+
Sbjct: 1   MDNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCS 60

Query: 127 DLRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
           +LRHQLDI YPVHNGIVQNWDDM HVWDHAF+NELK
Sbjct: 61  ELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELK 96

[Close]

BLAST of CsaV3_2G033990 vs. TAIR 10
Match: AT1G49240.1 (actin 8 )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 68  DNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCAD 127
           D+   +VCDNGTG VK GFAG++ P +VFP VVGRP  R+   ++    KD  VG+    
Sbjct: 5   DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEAQS 64

Query: 128 LRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
            R  L + YP+ +G+V NWDDM  +W H F+NEL+
Sbjct: 65  KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97

[Close]

BLAST of CsaV3_2G033990 vs. TAIR 10
Match: AT2G42100.1 (Actin-like ATPase superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 68  DNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCAD 127
           D    +VCDNGTG VK GFAG++ P +VFP VVGRP  R+   ++  + KD  VG+    
Sbjct: 6   DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHRGVMVGMDEKDTFVGDEAQA 65

Query: 128 LRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
            R  L + YP+ +G+V NWDDM  +W H F+NEL+
Sbjct: 66  RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98

[Close]

BLAST of CsaV3_2G033990 vs. TAIR 10
Match: AT3G18780.1 (actin 2 )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 68  DNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCAD 127
           D+   +VCDNGTG VK GFAG++ P +VFP VVGRP  R+   ++    KD  VG+    
Sbjct: 5   DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEAQS 64

Query: 128 LRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
            R  L + YP+ +G+V NWDDM  +W H F+NEL+
Sbjct: 65  KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97

[Close]

BLAST of CsaV3_2G033990 vs. TAIR 10
Match: AT3G18780.2 (actin 2 )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 68  DNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCAD 127
           D+   +VCDNGTG VK GFAG++ P +VFP VVGRP  R+   ++    KD  VG+    
Sbjct: 5   DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEAQS 64

Query: 128 LRHQLDITYPVHNGIVQNWDDMCHVWDHAFFNELK 163
            R  L + YP+ +G+V NWDDM  +W H F+NEL+
Sbjct: 65  KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97

The following BLAST results are available for this feature:

BLAST of CsaV3_2G033990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652258.1	1.7e-95	100.00	hypothetical protein Csa_022649 [Cucumis sativus]	[more]
XP_031737195.1	1.8e-52	100.00	actin-related protein 2 [Cucumis sativus] >XP_031737196.1 actin-related protein ...	[more]
XP_008441307.1	1.8e-52	100.00	PREDICTED: actin-related protein 2 isoform X1 [Cucumis melo]	[more]
XP_023544804.1	8.8e-52	98.96	actin-related protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022956707.1	8.8e-52	98.96	actin-related protein 2 [Cucurbita moschata] >XP_022990529.1 actin-related prote...	[more]

BLAST of CsaV3_2G033990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD6	2.3e-50	89.58	Actin-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=1 SV=1	[more]
A2YUL5	1.2e-46	85.42	Actin-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=ARP2 PE=3 SV=2	[more]
Q6Z256	1.2e-46	85.42	Actin-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP2 PE=3 SV...	[more]
O96621	3.6e-32	60.42	Actin-related protein 2 OS=Dictyostelium discoideum OX=44689 GN=arpB PE=1 SV=1	[more]
P53487	8.9e-31	58.95	Actin-related protein 2 OS=Acanthamoeba castellanii OX=5755 GN=arp2 PE=2 SV=1	[more]

BLAST of CsaV3_2G033990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B342	8.6e-53	100.00	actin-related protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485464 PE=3 ...	[more]
A0A6J1JSA3	4.3e-52	98.96	actin-related protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111487379 PE=3 SV=1	[more]
A0A6J1GX50	4.3e-52	98.96	actin-related protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111458342 PE=3 SV=1	[more]
A0A6J1C0Y8	2.8e-51	97.92	actin-related protein 2 OS=Momordica charantia OX=3673 GN=LOC111006424 PE=3 SV=1	[more]
A0A6J1JYK0	1.8e-50	95.83	actin-related protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489...	[more]

BLAST of CsaV3_2G033990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27000.1	1.6e-51	89.58	actin related protein 2	[more]
AT1G49240.1	5.4e-23	47.37	actin 8	[more]
AT2G42100.1	5.4e-23	47.37	Actin-like ATPase superfamily protein	[more]
AT3G18780.1	5.4e-23	47.37	actin 2	[more]
AT3G18780.2	5.4e-23	47.37	actin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	PRINTS	PR00190	ACTIN	coord: 91..100 score: 49.69 coord: 116..127 score: 32.17 coord: 128..150 score: 50.65
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 68..163 e-value: 1.3E-20 score: 73.4
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 67..162
None	No IPR available	GENE3D	3.30.420.40		coord: 68..164 e-value: 9.8E-31 score: 108.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..62
None	No IPR available	PANTHER	PTHR11937:SF439	ACTIN-RELATED PROTEIN 2	coord: 67..162
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 67..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G033990.1	CsaV3_2G033990.1	mRNA