CsaV3_2G033720 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAAGAGTATTAACTTTAGGGTCTATCAAAATTGTGACAATTTGAATGTAATGCGCAAATTGAAAAAATGAGAATTTGAATTGGCCGCGTCTTGTCTTGGTGGTTAAACTGCTTTGAATTATAAAAGAGTAGAAAAAGACAAAGAAGACTTCTCCAATGCTCATTTTTGACCAATCACATACTCTTCTTCTCCTCCAATATTCATCATTTTCATCAGTTTTTTTCTTCTCTCAACGCCTATTGCCTTTCTTACATTTCAACCAAAACTTTCCTTCCTTCCTTCTACACTTTTGAATCGTCTCTTTCCCTCTGTACCTCCGGCGACTTTCTGTTTAAGGCTCCTAGATTGAAGGAGAATGCCGAATTGGGAGCTTAGGAATTGCTGTCACCGTGATCAGGTTCTCTTCTTAGTAACCATTGGGGTGTTCACTCTTGTAATCCTCGCGGTAAGCTTCGCTGCAGTATTTCTATTTCCGTTTATTTTATTTGTTTTTTTAAGCTCGTTTTCAGTTGTGGATTTGTATGATTCTGTGAATTTTGATTGATTTTTAAGTTTGTGTTTGATGCTGAGAAGTTAACTGTTTAATCCGACTTAGGTCGTGGTTCTTCCCTGTTATCTAGTCTCCATTTAAGGTTGCGTTCTTCTCTGACCAAAAATCTACTTGAACTTGGGTATTTCTTGTTAATCCTCTTAAACACCGTGTTTGAGTTATGTAGGTGCCTAAGTATTTGAAGAATTCAAATTAAGATTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTTAGGTTAATTAACATTATATTTCTGCCTGTATTCTCAGCCTTCTTAGCTGACCGCAGACAGATACAGATCGAAATACTAGGCTTGAACTGAGTGGGGATATTCAAATTCTGAAGAACTCAATTTCCTTCATGTTTTATCATTGTCCTTGTATGACATGGTTTCCAACCACCCAAACAAAATTTTCCCCCCTAGAAAATGAAATTAGATATCTGACGTAGTTAGAGAGCTTGAGAACTTGATGGAACTTACTAGTAGCTTTTGGATTCTAATTTTTTTTACAAAAAGGTACAGATGTTTCCTTGAGTATTCTTGAAGTGGAATCCTTATTGTGCATCCCAACCGAGCAAGCTTTTTTCTTGCCTTCATTATTTGCTCGATGGATATTGATTTTCTCCCTCTGAATGTGACAGCTATGGAGGACGTTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCACGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTATATATTTTATCTTCACTTCTATTTGCTGTGGTGATTGAAATGGAACATATTGCGTTGGCATTGTTTTATTTTCTTATATAACAAGAGATATCATATTTCTACTCTAACTATATATTTTTTTTAGCTGGCTACGCCTTTACCATAATGCTCAAAGGGCATAGTGAAGGAAACATGATGTTCTCTGCGTATTTCTTATTGTGTTTTGAGTTAGCTATTGATGTAGTTTATTTCTGAAGTTCTGAGGTAACTTGCCTTGAAACTTCTTTCTAGAAAAATCATGGATTTAAGAAGTAAAAGGTCTATGAAATCCCCATGATCTCCCGAACTTTCTTGTTTCTTCACACCCTGAAGTTTCTTTATTTCCTAATTGACCAAAGGATCCTCTTGAGGTTTGTCCCCCAAATAAATAGCATGACGCTGTTTGTTGAAGGATTTGCCAATGTGGGAGGTTGATAAACTATTCAATCCTTTGTTCTGCTGTGAAGGTTGTAGGGTCAATTGAACTTGATAAAAATTTCATTCTGAAAGGTGGCAATTGTTTTCTTAGCTTTCTAACAAAGGATGCAGATATTAGGGTAGAAGGCTACCTTTATGGACCATTTCAAAACCCAGTCCTACATTCAATTGGTTATATTTCTTACCATTAATCTCAAATGAAAATTATCAGAGTAGAACCAAACAATTATAAGAATAATAGAGAATCATAATAGGAGCTCTGCAAACCCTGTTGGAGCCACATTGAGAAAGAAATATTTGAGATGTCTAGAGGCATCTTGAACCTTTCTTCCTTTTTTTTTTTTTTTTGGTAGTAAGACTAGGTATGTTAATGATAAAAGATCCATAATCAAGATATCCATGAGAGTTGGCTTTATCAATCAATCTGCTAAAAGTAGTTTTTGAACTTATAGTACTCTCTTTTGTTACATTACAAGTGCCTACTGTGTTTGTGATCCCAACTTGTTTAATGAATTGTATTTAGTTTCATTATATGGGAGGCTGAAGTTTAAGCTCAAAAAGATAGGTAGCGGATGTTTTTTTCCAGTAAGATTCTTCTGCCGCCACTAGATGTAGAATATGAATTGGCTATAAGGACCACTGAGATATCCGTCCATTCCAATATTGGTTTAAGGTTCTTCGAGGTGCCGGTGGGGGTCTCCTATCATCCTATTTTCCAGATTCTTTTCCATCATCTCCTATTCAAGTTAACTTGCCCGAATTTTTAGAAATTTCCATTTAGCATTCATTCATGCCAACTTGTTTCCTTAAATACAAGGCATCTTCACTGCTATGATACAGTTATCAATTTCATCAATTACCCTCGTGTGGGTATCTTTTTAGTTCAGGAAACCCTTAAATAGTGATCATTTGTTAAGTATGTTTGAAGTCAATATGCTATCTCTTTATAGATATCCTTGGTTTGTGATTAATGCACCTAGAGGAAGTTGATATACCCAGTTTATTTGCAGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGAGTAACTCAAACACGTGGTGGTGCATATTGGTTGATTTTGCCTGCAGGATGTAATTTTCCTATTCCACTTCTTTTTATATTCGCTGATAAGCAGTAAGATTTGCAGCCGATCATGTTTTGAAATTGAGTGTGCATGCATTCCTCCATTCTGCATTATAGAGAAAAACGTACATATGCTGACAATCTAAATTAATTTTAAAAGTAACGAAAGTCAGTACAAGTTATTCACCATGCCACCCGCCCCTACTATCTTCCAGAAGATGAATGAGGTTTCAAGTTCGTACTTAGAAGATTATTTTAGTTTTTCTTAGACAACTGCTTCTTTACAATCATAATTTGGAAAAACATTTACAACCTTTTTCTCTCTTTTTGTGGAACTGCCATTTATATTATTCATTCGTTCACTTCAACCTAGATCTTGGATCATCATTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACCGCTAGAATTGCAGCGGGTTGCTTGGGTTTAGCTCTTCTTGTTGTCCTCTTCATTGCTAAAAATGTAAGGAAAAAAATGAGCAAGAAATGATTTCATTATACATTATTAATTACTATCAATTTCTTACCTCTCTGTTAAACTTTTTACACAGTGGACGCTTAGAGGACTTTGTGTTGGTAAGCGTTCTCATGATCTTTTTCCTAGGAACTGAAGTTTATAGAACACTACTTTTATTGCTCTTAACATTGACATTCACTAACTGAATACCTCAGGATTCATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGTATACATTATAGCCTGCAATAATAACTGTCTTCTTTTAATGGATATTATTTTCCTCACTGGATAAAGAAGGGCTGCTTACTTTTATGTTGATGTTTTGCAGGTGTCATGAACAGTTTGTTTTCAGTTTACGGTATAATATCATAAATCTTCTCTACAATATATGAGAATTTTGTATAGATGTCTCATTCTCAACTCCCTAAATGATTAATGACCTAACCATCACAAACAAATGAAATCTAACATTCTACTTACGTCTAAGTGCACTACCACTTTTGTACACTGTTGTGTTAGGAATGACCATATCTATCATATCCCTAACACGATGACCATGTCTATTGCAATCTTTATTTTCCTCATTTTGTTGTGTTTTTGCCATGAATATTGCATTGGAGTGGAGAAATGTGAAAAACGTGATAGTGACCATTACATTAAGACCACGATAGTCATAGTATTCCTAACGTGATACATGAAAAGCAGAGTGTGTTTTGATGTAAACATAAAGTTAGATTTCATTTTTTTTTGTGAGATAAGGTCAATAATCATTTAAGTGGCTAAGAATGGGTCGTCCCTAATACTAGTAGTAGTAGTAATCTAGAATGTTAGTATATGAAATTCATATGGTTTATCCTTCCTAACTCATGCAGATATATATGATGATTTGATTTCACGAAGAGTCAATTCGAGCGATGCTGAGAAGTTTGCGGAACTGTGTCCATGCCCTTGTAATGGAATTGGTTGGGGAGTCATTTGGTAATTAACATCTCAATCTTTGGGATAACATAGCCACAAATAATCTAATCATGCACTACCGCATTAAAATGAAATGAAATATAATCCAAAAGTTCTTGTTTTAATAGGATCATTATTCATTATAGAAGGTTGATATGTCAAGATGTTCATGATTTTGCATCAATTCTCCACTCACCACTCATCCATTTAATAATTTGAACGATCACTTTTGCAGGGGAATGATATCATTTATCTTCTTATGTGCTTCAATATATCTTGGTCTTGTCATTCTATCTTAAGGTACATGCAGATCTCCAACCTTTAGATTTCCTCTCGTTTAATTGTGATTTTTTTTTAAAAAAAAGCATTAAAATATCTCGGTCTTCTTGTCCTACAAACTGTATAACATATTTAAAATAGATATATTTATTTCTTTTTTCTTTTTTCTTTTTTCTTGAAGCAAAGGCTATATAATTACTGTTTCAGAAGTTAATTGCAAAATTCATAGAAGATCATTCAAATCTAAGCTTCAATTTCATGATCAGGTTCAGGTTTAAAATGTGAGTATTGAATCTTTAAATTGCTCGAGTTCTTTGTTGGGTGGCTGCGTCTATCCCCAAGCTTTTATACTTCGGAGTTTGGAGAAAAGCCTCTTTTTGTTCTAACCATCCTCACTTCCAGCCTTCAATTTTACATATATTTTGTACAAAATTGTACTCTCATATTCTTTATTCCCTTTTCATTATTATTACTATCATTGTTATTATTATTATTTTGAACTATAAACCTTCCAAATTTAATTATTGGTTACACTTGCAAACGTGGAATTATCTTTAAATTTTGATTAGACAACCATTGAAGTACCTATGACTAAGGCCCTTATTTGGTAACCATTTTTTAAAAAATTAATTTTAT ATGCCGAATTGGGAGCTTAGGAATTGCTGTCACCGTGATCAGGTTCTCTTCTTAGTAACCATTGGGGTGTTCACTCTTGTAATCCTCGCGCTATGGAGGACGTTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCACGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGAGTAACTCAAACACGTGGTGGTGCATATTGGTTGATTTTGCCTGCAGGATATCTTGGATCATCATTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACCGCTAGAATTGCAGCGGGTTGCTTGGGTTTAGCTCTTCTTGTTGTCCTCTTCATTGCTAAAAATTGGACGCTTAGAGGACTTTGTGTTGGATTCATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGTGTCATGAACAGTTTGTTTTCAGTTTACGATATATATGATGATTTGATTTCACGAAGAGTCAATTCGAGCGATGCTGAGAAGTTTGCGGAACTGTGTCCATGCCCTTGTAATGGAATTGGTTGGGGAGTCATTTGGGGAATGATATCATTTATCTTCTTATGTGCTTCAATATATCTTGGTCTTGTCATTCTATCTTAA ATGCCGAATTGGGAGCTTAGGAATTGCTGTCACCGTGATCAGGTTCTCTTCTTAGTAACCATTGGGGTGTTCACTCTTGTAATCCTCGCGCTATGGAGGACGTTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCACGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGAGTAACTCAAACACGTGGTGGTGCATATTGGTTGATTTTGCCTGCAGGATATCTTGGATCATCATTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACCGCTAGAATTGCAGCGGGTTGCTTGGGTTTAGCTCTTCTTGTTGTCCTCTTCATTGCTAAAAATTGGACGCTTAGAGGACTTTGTGTTGGATTCATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGTGTCATGAACAGTTTGTTTTCAGTTTACGATATATATGATGATTTGATTTCACGAAGAGTCAATTCGAGCGATGCTGAGAAGTTTGCGGAACTGTGTCCATGCCCTTGTAATGGAATTGGTTGGGGAGTCATTTGGGGAATGATATCATTTATCTTCTTATGTGCTTCAATATATCTTGGTCTTGTCATTCTATCTTAA MPNWELRNCCHRDQVLFLVTIGVFTLVILALWRTFIITPFKLITVFLHEASHAIACKLTCGEVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTARIAAGCLGLALLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGVMNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLVILS* Homology
BLAST of CsaV3_2G033720 vs. NCBI nr
Match: XP_004138640.1 (uncharacterized protein LOC101216469 [Cucumis sativus] >XP_031736986.1 uncharacterized protein LOC101216469 [Cucumis sativus] >KGN63127.1 hypothetical protein Csa_022318 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 9.9e-126 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. NCBI nr
Match: XP_008441253.1 (PREDICTED: uncharacterized protein LOC103485439 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. NCBI nr
Match: XP_022134386.1 (uncharacterized protein LOC111006658 [Momordica charantia]) HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122 Identity = 226/233 (97.00%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. NCBI nr
Match: XP_038884186.1 (uncharacterized protein LOC120075093 isoform X1 [Benincasa hispida]) HSP 1 Score: 448.4 bits (1152), Expect = 3.9e-122 Identity = 227/233 (97.42%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. NCBI nr
Match: XP_022989897.1 (uncharacterized protein LOC111486947 [Cucurbita maxima]) HSP 1 Score: 447.2 bits (1149), Expect = 8.7e-122 Identity = 225/233 (96.57%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. ExPASy TrEMBL
Match: A0A0A0LQR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404790 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 4.8e-126 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. ExPASy TrEMBL
Match: A0A1S3B2J8 (uncharacterized protein LOC103485439 OS=Cucumis melo OX=3656 GN=LOC103485439 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125 Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. ExPASy TrEMBL
Match: A0A6J1BXP1 (uncharacterized protein LOC111006658 OS=Momordica charantia OX=3673 GN=LOC111006658 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 6.5e-123 Identity = 226/233 (97.00%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. ExPASy TrEMBL
Match: A0A6J1JH30 (uncharacterized protein LOC111486947 OS=Cucurbita maxima OX=3661 GN=LOC111486947 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.2e-122 Identity = 225/233 (96.57%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. ExPASy TrEMBL
Match: A0A6J1H4G9 (uncharacterized protein LOC111460403 OS=Cucurbita moschata OX=3662 GN=LOC111460403 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CsaV3_2G033720 vs. TAIR 10
Match: AT1G67060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). ) HSP 1 Score: 397.1 bits (1019), Expect = 9.6e-111 Identity = 197/232 (84.91%), Postives = 217/232 (93.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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