CsaV3_2G033640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G033640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 22324788 .. 22325349 (-)
RNA-Seq ExpressionCsaV3_2G033640
SyntenyCsaV3_2G033640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTCTATTTAGTAGTTGGTTTACTTTAAGTCAATTCTCCTAATTTTAGTCTAAATACTTTTCATATATTCTTGATTTTAATTTTAATTTTGTTATATATTATTATTTTTGCTATAAATTTTGAAAATATATATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGCGACGCGACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAAGAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTGGAGGTTCTAGTAAAAAGTCCAAGTATGCATTCAGTCAAAGATTGCGTCGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTCAGAGGTTTGTAGGCGAAATAATATTGTTTGTTACAAGTGTAGGGAGAACATGGACATTACAAAAGTGAATGCCAAGTTAAAACTAAAGTAGGCGAGGAACCAGCGCAAATAGGGGTGGTGTCACACTCAGTACAACAACCTTCACGAGGAGGCTCTCCGGTAG

mRNA sequence

ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGCGACGCGACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAAGAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTGGAGGTTCTAGTAAAAAGTCCAAGTATGCATTCAGTCAAAGATTGCGTCGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTCAGAGGTTTTACAACAACCTTCACGAGGAGGCTCTCCGGTAG

Coding sequence (CDS)

ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGCGACGCGACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAAGAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTGGAGGTTCTAGTAAAAAGTCCAAGTATGCATTCAGTCAAAGATTGCGTCGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTCAGAGGTTTTACAACAACCTTCACGAGGAGGCTCTCCGGTAG

Protein sequence

MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLVKSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR*
Homology
[Close]
BLAST of CsaV3_2G033640 vs. NCBI nr
Match: KGN63119.1 (hypothetical protein Csa_022008 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV 60
           MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV
Sbjct: 1   MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV 60

Query: 61  KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR 102
           KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR
Sbjct: 61  KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR 101

[Close]
BLAST of CsaV3_2G033640 vs. ExPASy TrEMBL
Match: A0A0A0LQ25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404230 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV 60
           MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV
Sbjct: 1   MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSVEVLV 60

Query: 61  KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR 102
           KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR
Sbjct: 61  KSPSMHSVKDCVGVAIQSGGALNVVKDIQRFYNNLHEEALR 101

The following BLAST results are available for this feature:
BLAST of CsaV3_2G033640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63119.12.5e-49100.00hypothetical protein Csa_022008 [Cucumis sativus][more]
BLAST of CsaV3_2G033640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G033640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ251.2e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404230 PE=4 SV=1[more]
BLAST of CsaV3_2G033640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G033640.1CsaV3_2G033640.1mRNA