CsaV3_2G033600 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGATGCAGATTACCTAAACTCGAACAAAAAAGAGGACAAATAAGGTCCCTTTCGAGTTTTTTTTGTTTTTTTATATATATATATTTATAAGAGTTCTCTAGATTTTTCCCTTAAAAGTAAATAAGCAGAAGTATTTGTATGGATTTTATTAATTTTATTTTTTCCTAACTTTTATTTGTGGCTTTTAGTTCATTCCAAACCGCCTAAGTTATGGAGTTTAGCCCTTAAACCCTAACAAAATCCCATTCCGTTGAGAGAGGAAGTGAAGGTTTTGTTGTTTCGGTTCAATTCTACATTCTTCTTCCATATTCCACAATGGAGCTTCATTCCGCAACTCTCCACACCTCATTCTCCTTCTCTATCAGAAGCACACCTCTTGCTCACGGAGACGCCTCTGCCGCTTGCTCTCCCTCCCTGCCATCGCTTTCAAGAATCACAATTCGAAACTTTTCTTTGGGTTCGAAAAGTAGAGGTAATTTTGCTAACTTTGAACTTTGTTAAGTTTCCGATGAGTTGCTAAGACTGAACCACGAGTTTCATACCTCTCTATACTTCTGTACTATTGCTCGATGCTTTCAGTTTCATCCGGGTGAGACCTCTGTATAATTATGCATACTTCGAGGAAAAGGATTGAGATTTTGATTCTGTGTTCTCTTTGGTGTTCTGTTCACTATACGAAGAATAGTAGTCTGAGAGGCATATTATCCATGGCGGATATAGAGAACGAAGGTTGAAGACGAATTGGGGGGGAAAAAAAGGAAAGAATGGAATTAGGTGGCGATAGAAATACAACTGATACCATATTAGAAGAAAAGACTTTCTTTAATAAAATATCTCTCGTTTTTTACTAATGGCTAGAAACATTGATATATACACATGTGAAAGATTAAAAGGAGAATACAACGTTGTTATAGAAATAACTATTTTTAATAACAAATAATAACAAACTAGCTTCTAATAACTACAATATTCTCGACGTGGAAAAATGGTCCTTAAGAATTATTTAAACCGAAGTGTCGAAATTCGGCCACAATTTCTATATATACGCATGTGTGTATTGATGTGTATAGCTATGCATTGGTCTAGATGCTGAATATATGTTGTTTAAGTTATTGATTCCTTATAGTTTGTGTTTCAAGCTTCATATTGACTTAGCTAAGCAGTCACAAAGTGAAGGTAGTATGAACAGTCTAAAATTGCAGAAATTTAAAAGAATTGTGACAATGTTCTTTATAAAGTAGAGTGAAGTATTAGTAATTTTGTTGAATAGCAGGGTTCCCTTCACTGGTATGTCATGATAGACCAAAGAAGTCATCCTTTTCTGCCTTTGTCAGAGGGGTGAAAGCAGTACCCAGTGATTGCAATTCAGAAACTCTTGATTTATTGAATCCCTCTTCTGATGAGCCAGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAACTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACTCCAAAAGATTGGAGACGGTTAATTGCTTTCAGCAAGGAATGGGACAATATCCGTCCTCATTTCTTTAACAGGTGCCAAGATCGAGCTGCCTCTGAAGATGATCCTGGTATGAAGCATAAGCTGCTTCGTTTTGGAAGAAAGTTGAAAGAGGTATACCTTGGGATCTAAAAAAATTCATAGTAAAAGATTTGACATAAGAGTTGTGGACCTTGTTTCTGTAATTTTGCAAATAAGAAGAGTAGAAACTGACACTTTGTATCTAAATGAAGTTAGGTCTATTGTTGTAAAACCCATAGAGGATGAGTTGCTGAGGGAAGAATTGAGATGAAATGTTGACAATGGTTATTTTATTGATCAGATAGTCGTAGTATGTGATTTGTCAATCAACCTTATTGTTTCCTTCTATGAAATTTCCACAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTGTCAGAGCAACATCACCTTCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACGAAAGAATTCTTTGTGCATCTTCACACGGTGGCTCAATCTTATTATGATGATCCGGCTAAGCAAAATGGTAATACTGCATACTTTACAGTTGGGAAAATAGTAAAGAATAAATAGCTTCCAAGAGGATGAGGAAGTGTGGTTTAGAAAGCAATTATATTGGTTGAAAATACCCTTTAAAGTTCTAATTATCGTTTCAATCTGGTCCTTAGATTTTAAAATATTACATTGATTTTTGAATTTAATTTCCATTTAATCCTTAGGATTTAAAAGTTTTAGCCGTTAAGTCACGGCTAATATCTAATTAAAAGTTTCAATCTGGTCCTTAGGATTTAAAAGTGCGTTAACTCACTGCTAATGTTTACTTAAAACATTATCATTTGAAATGACCAAATGGAAACTACAATCAAAACTAAGGGCCTAAAGGATACCTTCCCTATATTGTTTTTTATGCTATTCAAAGAATTAGTGGCCTCTTAGAAATTGTTCCTTTATCATAAGAAGTCCTGAAGAGTAGCTAGATTGGTTAAGACATTATGTATCTGTCAACTGTTTGAACTTATAACTCCACTTTTTTTTTTTTTGTTAAGGATGTCTCTGGTGAACGTTTTTTTTTAATTTGCATATATGGTATTGATAGATGAACTGATATCCACCCCCACCATATTTCAATTGATAAGCTTTGGCAAAACTTGGGAATTCCTGCCTTGCTGCTGTACAAACATATGATGCTGCTACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAAGATATCATTAATTCTCCAACTATAGATGCCGCTTGCAGAAAGATAGACAATTTGGCAGAGAAAAATCAACTTGATTCTGCATTAGTGTTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCAAACATGATGAAAGAGGAGGTAATGCGTTTGCTCTTCCTGATCGCTCCTGCTGGAAACAGGTGGTTTTATGGTCTTATTTCTATGATCTTGTAGCTTGGCAAGGCATCATCCAACTATTCCCGAAATTTCAAATGATTGTTTAAGTTAGTAATCATCGAAACTTCCAATAACGCTTCAAATACAATTATCTATTTGAATGAAATTACTACAGCTAAGGGCACCAGGGTAAAAAAAATACCAATTATTTCTCTTGATTTTACGTGTTTCTATGTTGCCTCATGCAAGCAAATGGAGAATGTACGTCTTCAGTTGTTGCTTAATGACTTTCTGATGGTTTTATTGTTGATTTTGTTCTCTTTGTTAGGCGAAAGACATACTATACCACTTATATGTCACCGCAAGGGGAAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATCCTGAAGTATCTTCTCACAATTAATGATCCTGAGGAAAAATTAAGTGCTTTGAAGGATGCATTTACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGTATGCTATCAGACCTTATTGTTAAGAATATACTGAAATACTAAATATGCCATAGTTTATTAGCTCGACCAAAATTAGCGATTTAGCATGATATCAGATCTTCTATGTTCAGACCCTTAGGGTTTTATTTTCTTATCTACAATGTTGTTTTTCTACTTGTTCGATACTTGACATTGCACCATTTCTTGTAGCCTGCAAATGGGATGTTAAGAATACATCCAAACAATTAGATATTAGCGGTGAGTTAATTAACACCCTCATTGTCGTCATACCTTCTCATCAAACAAGAAAAAAAAAAAAAGAAAGTGGGTGATGTGGTAGGATTAGAGTAACTTAGGTATCTTGGTAAATCCTTAATTGATTAGGATTATGATTAGTTTATTTGATTAATTAAGATTAAGATTAGTTTACTTTACAATTCTCTATTTCTCTTCTTGGGTCATAACTTTTGACACATAATCAAGACTTTCATTTTAGCATTAGTATTGGAGATTTCTCTTCTTTTATCCATTTGGAATTTAGGCTGCATCAAAAAGCCTTAGTCTTGTTCGTCCTCGTAGATCTTTCGAGCCTTTGATGTCCATCTAGATAAGAGTACGAATACTACCTTGACTTTACATTTGCACAACACCAACCACAATCACTTGAATGCTGTATGAAAAACGTCCTTCAGAAAGGCAATCTTATTAGGTTTATTCTTGTTTTTGGAAACTTTTAGGACCCCAGAGGAGCTTCACACGTGGGTAAAGACAGTGGTAGATGCTTATCATTTCAGCAGGGAAGGCACCCTCGTCAGGGAAGCCAGAGACCTTATGAATCCACAGCTCATCGTTAAACTTGAAGAATTGAAGGGTCTCATTGAGAAGAAATTCATGTGAGGTACTAAAGGATTTGGTAGTTAGGTCTTAATTAGTGCATCAAATGTTGTATAGTGAACTTTTTTCTTTCTTTTTTGCCTTTTTGTGTAACAAAATGAATATGAACAATGTATTCAAAATAATTTATTTTTTACCCGGAAATAGAGTGTAGTTCAAGACTTCAAGTGGTGAGATATTTGTACCTGTTTTGCAGTTTGTATCCTAATCTGCAATCGTAACCAAGAGAATGAGATTTATTGATTGTGTTTACTAATCCATTCATAGTAAAAAGAGAATTTGTGGTGTTGTTT ATGGAGCTTCATTCCGCAACTCTCCACACCTCATTCTCCTTCTCTATCAGAAGCACACCTCTTGCTCACGGAGACGCCTCTGCCGCTTGCTCTCCCTCCCTGCCATCGCTTTCAAGAATCACAATTCGAAACTTTTCTTTGGGTTCGAAAAGTAGAGGGTTCCCTTCACTGGTATGTCATGATAGACCAAAGAAGTCATCCTTTTCTGCCTTTGTCAGAGGGGTGAAAGCAGTACCCAGTGATTGCAATTCAGAAACTCTTGATTTATTGAATCCCTCTTCTGATGAGCCAGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAACTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACTCCAAAAGATTGGAGACGGTTAATTGCTTTCAGCAAGGAATGGGACAATATCCGTCCTCATTTCTTTAACAGGTGCCAAGATCGAGCTGCCTCTGAAGATGATCCTGGTATGAAGCATAAGCTGCTTCGTTTTGGAAGAAAGTTGAAAGAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTGTCAGAGCAACATCACCTTCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACGAAAGAATTCTTTGTGCATCTTCACACGGTGGCTCAATCTTATTATGATGATCCGGCTAAGCAAAATGCTTTGGCAAAACTTGGGAATTCCTGCCTTGCTGCTGTACAAACATATGATGCTGCTACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAAGATATCATTAATTCTCCAACTATAGATGCCGCTTGCAGAAAGATAGACAATTTGGCAGAGAAAAATCAACTTGATTCTGCATTAGTGTTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCAAACATGATGAAAGAGGAGGCGAAAGACATACTATACCACTTATATGTCACCGCAAGGGGAAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATCCTGAAGTATCTTCTCACAATTAATGATCCTGAGGAAAAATTAAGTGCTTTGAAGGATGCATTTACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGACCCCAGAGGAGCTTCACACGTGGGTAAAGACAGTGGTAGATGCTTATCATTTCAGCAGGGAAGGCACCCTCGTCAGGGAAGCCAGAGACCTTATGAATCCACAGCTCATCGTTAAACTTGAAGAATTGAAGGGTCTCATTGAGAAGAAATTCATGTGA ATGGAGCTTCATTCCGCAACTCTCCACACCTCATTCTCCTTCTCTATCAGAAGCACACCTCTTGCTCACGGAGACGCCTCTGCCGCTTGCTCTCCCTCCCTGCCATCGCTTTCAAGAATCACAATTCGAAACTTTTCTTTGGGTTCGAAAAGTAGAGGGTTCCCTTCACTGGTATGTCATGATAGACCAAAGAAGTCATCCTTTTCTGCCTTTGTCAGAGGGGTGAAAGCAGTACCCAGTGATTGCAATTCAGAAACTCTTGATTTATTGAATCCCTCTTCTGATGAGCCAGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAACTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACTCCAAAAGATTGGAGACGGTTAATTGCTTTCAGCAAGGAATGGGACAATATCCGTCCTCATTTCTTTAACAGGTGCCAAGATCGAGCTGCCTCTGAAGATGATCCTGGTATGAAGCATAAGCTGCTTCGTTTTGGAAGAAAGTTGAAAGAGATTGATGAAGATGTGCAGAGACATAATGAACTTCTTGAAGTTGTCAGAGCAACATCACCTTCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACGAAAGAATTCTTTGTGCATCTTCACACGGTGGCTCAATCTTATTATGATGATCCGGCTAAGCAAAATGCTTTGGCAAAACTTGGGAATTCCTGCCTTGCTGCTGTACAAACATATGATGCTGCTACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAAGATATCATTAATTCTCCAACTATAGATGCCGCTTGCAGAAAGATAGACAATTTGGCAGAGAAAAATCAACTTGATTCTGCATTAGTGTTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCAAACATGATGAAAGAGGAGGCGAAAGACATACTATACCACTTATATGTCACCGCAAGGGGAAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATCCTGAAGTATCTTCTCACAATTAATGATCCTGAGGAAAAATTAAGTGCTTTGAAGGATGCATTTACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGACCCCAGAGGAGCTTCACACGTGGGTAAAGACAGTGGTAGATGCTTATCATTTCAGCAGGGAAGGCACCCTCGTCAGGGAAGCCAGAGACCTTATGAATCCACAGCTCATCGTTAAACTTGAAGAATTGAAGGGTCTCATTGAGAAGAAATTCATGTGA MELHSATLHTSFSFSIRSTPLAHGDASAACSPSLPSLSRITIRNFSLGSKSRGFPSLVCHDRPKKSSFSAFVRGVKAVPSDCNSETLDLLNPSSDEPVRDVQNAKDSVENLDQHKMTKVCDKLIEVFMIDKPTPKDWRRLIAFSKEWDNIRPHFFNRCQDRAASEDDPGMKHKLLRFGRKLKEIDEDVQRHNELLEVVRATSPSELGEIISRRRKDFTKEFFVHLHTVAQSYYDDPAKQNALAKLGNSCLAAVQTYDAATENIEALNAAELKFQDIINSPTIDAACRKIDNLAEKNQLDSALVLMITKAWSAAKESNMMKEEAKDILYHLYVTARGNLQRLMPKEIRILKYLLTINDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEELHTWVKTVVDAYHFSREGTLVREARDLMNPQLIVKLEELKGLIEKKFM* Homology
BLAST of CsaV3_2G033600 vs. NCBI nr
Match: XP_004138642.1 (uncharacterized protein At4g37920 isoform X2 [Cucumis sativus] >KGN63115.1 hypothetical protein Csa_022408 [Cucumis sativus]) HSP 1 Score: 867.5 bits (2240), Expect = 5.0e-248 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. NCBI nr
Match: XP_011649916.1 (uncharacterized protein At4g37920 isoform X1 [Cucumis sativus]) HSP 1 Score: 862.8 bits (2228), Expect = 1.2e-246 Identity = 437/438 (99.77%), Postives = 437/438 (99.77%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. NCBI nr
Match: XP_008441243.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 798.9 bits (2062), Expect = 2.2e-227 Identity = 400/437 (91.53%), Postives = 417/437 (95.42%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. NCBI nr
Match: XP_008441242.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 794.3 bits (2050), Expect = 5.4e-226 Identity = 400/438 (91.32%), Postives = 417/438 (95.21%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. NCBI nr
Match: XP_038884061.1 (uncharacterized protein At4g37920 isoform X2 [Benincasa hispida]) HSP 1 Score: 774.6 bits (1999), Expect = 4.5e-220 Identity = 391/437 (89.47%), Postives = 408/437 (93.36%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy Swiss-Prot
Match: Q84WN0 (Uncharacterized protein At4g37920 OS=Arabidopsis thaliana OX=3702 GN=At4g37920 PE=2 SV=2) HSP 1 Score: 306.6 bits (784), Expect = 4.5e-82 Identity = 159/402 (39.55%), Postives = 257/402 (63.93%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy TrEMBL
Match: A0A0A0LMH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403700 PE=4 SV=1) HSP 1 Score: 867.5 bits (2240), Expect = 2.4e-248 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy TrEMBL
Match: A0A1S3B306 (uncharacterized protein At4g37920, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 798.9 bits (2062), Expect = 1.1e-227 Identity = 400/437 (91.53%), Postives = 417/437 (95.42%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy TrEMBL
Match: A0A1S3B2I9 (uncharacterized protein At4g37920, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 794.3 bits (2050), Expect = 2.6e-226 Identity = 400/438 (91.32%), Postives = 417/438 (95.21%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy TrEMBL
Match: A0A6J1DF51 (uncharacterized protein At4g37920, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020242 PE=4 SV=1) HSP 1 Score: 733.0 bits (1891), Expect = 7.2e-208 Identity = 370/439 (84.28%), Postives = 399/439 (90.89%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. ExPASy TrEMBL
Match: A0A6J1JSR8 (uncharacterized protein At4g37920-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489439 PE=4 SV=1) HSP 1 Score: 731.1 bits (1886), Expect = 2.7e-207 Identity = 370/437 (84.67%), Postives = 395/437 (90.39%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. TAIR 10
Match: AT1G36320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 523.1 bits (1346), Expect = 2.2e-148 Identity = 257/364 (70.60%), Postives = 308/364 (84.62%), Query Frame = 0
BLAST of CsaV3_2G033600 vs. TAIR 10
Match: AT4G37920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-83 Identity = 159/402 (39.55%), Postives = 257/402 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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