CsaV3_2G032360 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G032360
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ethylene-responsive transcription factor ERF003-like
Location	chr2: 21323734 .. 21324807 (+)
RNA-Seq Expression	CsaV3_2G032360
Synteny	CsaV3_2G032360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGGGACCCTTCTTCTCCAATGACCAAAATTGCTTGACAGTTCAGTATTTGGAAAATCCCAGCTCTCAATTTGTCACCATTTTTTTCTGTCTACAAAAACCCCTCCTCTCTTTTCGCATCCCTACTTCCTTCCAACATTATATTCACAGCACACTCCACTTCCCTCTTACCTTATTCATCACTATGCCTAGACCACAACAGAGATTCCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATCCGCCACCCCTTATTGTAAGTCTAGCTTCCTAAAAGGTTACCGGTTTGGTTCTAATTAATCTTCACTCCAATCTATACAGACAAACTGATATATATGTATTGATATTGTAAATGCAGGAAGACTAGAATTTGGCTAGGCACTTTCGAAACAGCGGAAGATGCTGCACGAGCATACGACGAAGCTGCACGTCTTATGTGTGGACCGAGAGCGCGTACGAACTTCCCTTACGATGCTTCTCTGTCTCGCTCTTCATCTTCCCGCCTTCTCTCGGCTACTTTAACAGCTAAGCTCCATCGTTGCTACGTGGCCTCTATGCAGCTCACCAAGCAATCTTCCTCTGCCGCTCGTCGTCCTCAAACTGATGTAATCCGAACCGATTTTTCTGTAGCGTCCGGCATTGCTCCGGTGGAGCGAGTGGAAGTGGACACGATGACGGCAAAGAAAGTCAAAATGGAAAGCGTGGATTGTGAGGAGCCATTGATGATTGAAATGTTGGATGATGATCATATACAACAAATGATCGAGGAGCTACTTGATTACGGCGGAATTGAGCTTCGTTAAGTAATTTGCTTCTTTACTTCAAACTATAAAATTTCATCTCTAATTATATTATATGTACAAAATATCAATTAGTTTAGCTAATTTTAATTAACCATTAAGAAGAAGAAAAAAAAAACTTCCGATCTTTTGAGGTCATTATTTCCTCTTGGCCAATCAAGATTTGTTTCTCTCCAGTTTGGCCAATTGAGTGGCGGCGCCCCTAATTTATTTTCATGTACTATTTTCTAAACTCTTCTATGTCACTTTATTATTAATATGAA

mRNA sequence

ATGCCTAGACCACAACAGAGATTCCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATCCGCCACCCCTTATTGAAGACTAGAATTTGGCTAGGCACTTTCGAAACAGCGGAAGATGCTGCACGAGCATACGACGAAGCTGCACGTCTTATGTGTGGACCGAGAGCGCGTACGAACTTCCCTTACGATGCTTCTCTGTCTCGCTCTTCATCTTCCCGCCTTCTCTCGGCTACTTTAACAGCTAAGCTCCATCGTTGCTACGTGGCCTCTATGCAGCTCACCAAGCAATCTTCCTCTGCCGCTCGTCGTCCTCAAACTGATGTAATCCGAACCGATTTTTCTGTAGCGTCCGGCATTGCTCCGGTGGAGCGAGTGGAAGTGGACACGATGACGGCAAAGAAAGTCAAAATGGAAAGCGTGGATTGTGAGGAGCCATTGATGATTGAAATGTTGGATGATGATCATATACAACAAATGATCGAGGAGCTACTTGATTACGGCGGAATTGAGCTTCGTTAA

Coding sequence (CDS)

ATGCCTAGACCACAACAGAGATTCCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATCCGCCACCCCTTATTGAAGACTAGAATTTGGCTAGGCACTTTCGAAACAGCGGAAGATGCTGCACGAGCATACGACGAAGCTGCACGTCTTATGTGTGGACCGAGAGCGCGTACGAACTTCCCTTACGATGCTTCTCTGTCTCGCTCTTCATCTTCCCGCCTTCTCTCGGCTACTTTAACAGCTAAGCTCCATCGTTGCTACGTGGCCTCTATGCAGCTCACCAAGCAATCTTCCTCTGCCGCTCGTCGTCCTCAAACTGATGTAATCCGAACCGATTTTTCTGTAGCGTCCGGCATTGCTCCGGTGGAGCGAGTGGAAGTGGACACGATGACGGCAAAGAAAGTCAAAATGGAAAGCGTGGATTGTGAGGAGCCATTGATGATTGAAATGTTGGATGATGATCATATACAACAAATGATCGAGGAGCTACTTGATTACGGCGGAATTGAGCTTCGTTAA

Protein sequence

MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVASGIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR*

Homology

[Close]

BLAST of CsaV3_2G032360 vs. NCBI nr
Match: XP_004138708.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN62981.1 hypothetical protein Csa_021824 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 7.8e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of CsaV3_2G032360 vs. NCBI nr
Match: KAA0064899.1 (ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87
Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAP ERVEVD  TAKKVKMESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of CsaV3_2G032360 vs. NCBI nr
Match: XP_008445253.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87
Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAP ERVEVD  TAKKVKMESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]

BLAST of CsaV3_2G032360 vs. NCBI nr
Match: XP_038886168.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 310.5 bits (794), Expect = 9.6e-81
Identity = 160/176 (90.91%), Postives = 167/176 (94.89%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQ     TDFS+AS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQ-----TDFSMAS 120

Query: 121 GIAPVERVEVD-TMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAP+ERVE D T TAKK+K+ESVDC EPLMIE+LDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPIERVEADTTSTAKKIKLESVDCGEPLMIEILDDDHIQQMIEELLDYGGIELR 171

[Close]

BLAST of CsaV3_2G032360 vs. NCBI nr
Match: XP_022996634.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 6.4e-77
Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAPV  VE D  + KKVK+ESVD  EP     LDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELR 169

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-52
Identity = 109/175 (62.29%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CY+AS+Q+TKQ+ +   + QT   R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIAPVE-RVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIEL 175
           G+   E  +        ++K E  +         L++DHI+QMIEELL YG IEL
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIEL 172

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.1e-42
Identity = 95/167 (56.89%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPY+ + S+SSSS+LLSATL AKLHRCY+AS+Q+T+  SS    P+  +I +  +   
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTR-PSSLPEAPR--IIASPNNAVK 120

Query: 121 GIA------PVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQ 162
           GI       P +R + +  T   +  + V  E     + L++DHI Q
Sbjct: 121 GIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.5e-24
Identity = 80/197 (40.61%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC------YVASMQLTKQSS- 125
           +                 +++S S+SS  LS+ L+AKL +C       +  ++L   SS 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 -------SAARRPQTDVIRTDFSVASGI-APVERVEVDTMTAKKVKMESVDCEEPLMIEM 169
                  + ++   + V+  +   AS       +   D + A   ++E     E    E+
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE----EV 184

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-22
Identity = 78/189 (41.27%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHR-CYVASMQLT-------------KQSS 125
             S   S           S + LS  L AKL + C   +  LT              Q  
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 SAARRPQTDVIRTDFSVASGIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHI-Q 170
           + ++   T V+R +      +     V++   T  K  +E  + EE  +I   D+D +  
Sbjct: 125 AGSKTSPTWVMRLEL---GNVVNESAVDLGLTTMNKQNVEKEEEEEEAIIS--DEDQLAM 184

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-22
Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YVASMQLTKQSSSAARRPQTDV 125
             S   +S        S + LS  L AKL + C     Y+  ++L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDFSVASGIAPVERVEV---DTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLD 170
            +T  +    +   ++V       +   K+K+ + D +E       DD    QMIEELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE-------DDQMAMQMIEELLN 178

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL
Match: A0A0A0LSL8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.8e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL
Match: A0A5A7VHF4 (Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002150 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87
Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAP ERVEVD  TAKKVKMESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL
Match: A0A1S3BD40 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488338 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87
Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTDVIRTDFSVAS
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAP ERVEVD  TAKKVKMESVDC EPLMIEMLDDDHIQQMIEELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL
Match: A0A6J1K9A3 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491817 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.1e-77
Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAPV  VE D  + KKVK+ESVD  EP     LDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELR 169

[Close]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL
Match: A0A6J1HED1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462772 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.9e-77
Identity = 155/175 (88.57%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 176
           GIAPV  VE D  + KKVK+ESVD  EP     LDDDHIQQMI+ELLDYGGIELR
Sbjct: 121 GIAPV-GVETDVTSTKKVKLESVDRGEP-----LDDDHIQQMIDELLDYGGIELR 169

[Close]

BLAST of CsaV3_2G032360 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53
Identity = 109/175 (62.29%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CY+AS+Q+TKQ+ +   + QT   R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIAPVE-RVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIEL 175
           G+   E  +        ++K E  +         L++DHI+QMIEELL YG IEL
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIEL 172

[Close]

BLAST of CsaV3_2G032360 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 80/197 (40.61%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC------YVASMQLTKQSS- 125
           +                 +++S S+SS  LS+ L+AKL +C       +  ++L   SS 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 -------SAARRPQTDVIRTDFSVASGI-APVERVEVDTMTAKKVKMESVDCEEPLMIEM 169
                  + ++   + V+  +   AS       +   D + A   ++E     E    E+
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE----EV 184

[Close]

BLAST of CsaV3_2G032360 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23
Identity = 78/189 (41.27%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHR-CYVASMQLT-------------KQSS 125
             S   S           S + LS  L AKL + C   +  LT              Q  
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 SAARRPQTDVIRTDFSVASGIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHI-Q 170
           + ++   T V+R +      +     V++   T  K  +E  + EE  +I   D+D +  
Sbjct: 125 AGSKTSPTWVMRLEL---GNVVNESAVDLGLTTMNKQNVEKEEEEEEAIIS--DEDQLAM 184

[Close]

BLAST of CsaV3_2G032360 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-23
Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YVASMQLTKQSSSAARRPQTDV 125
             S   +S        S + LS  L AKL + C     Y+  ++L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDFSVASGIAPVERVEV---DTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLD 170
            +T  +    +   ++V       +   K+K+ + D +E       DD    QMIEELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE-------DDQMAMQMIEELLN 178

[Close]

BLAST of CsaV3_2G032360 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-20
Identity = 73/181 (40.33%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YVASMQLTKQSSSAARRPQTDV 125
             S   +S        S + LS  L AKL + C     Y+  ++L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDFSVASGIAPVERVEV---DTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLD 170
            +T  +    +   ++V       +   K+K+ + D +E       DD    QMIEELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE-------DDQMAMQMIEELLN 175

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138708.1	7.8e-91	100.00	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN62981.1 hy...	[more]
KAA0064899.1	5.2e-87	96.57	ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. ...	[more]
XP_008445253.1	5.2e-87	96.57	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_038886168.1	9.6e-81	90.91	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_022996634.1	6.4e-77	89.14	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of CsaV3_2G032360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	1.5e-52	62.29	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	4.1e-42	56.89	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	6.5e-24	40.61	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	3.6e-22	41.27	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	6.1e-22	41.44	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CsaV3_2G032360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSL8	3.8e-91	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=...	[more]
A0A5A7VHF4	2.5e-87	96.57	Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var...	[more]
A0A1S3BD40	2.5e-87	96.57	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1K9A3	3.1e-77	89.14	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HED1	6.9e-77	88.57	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CsaV3_2G032360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.1e-53	62.29	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	4.6e-25	40.61	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	2.6e-23	41.27	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	4.4e-23	41.44	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.0e-20	40.33	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 61.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 2.0E-39 score: 147.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 1.8E-11 score: 44.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.718536
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 2.18915E-34 score: 113.521
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 4.3E-26 score: 92.8
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..174
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..174
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032360.1	CsaV3_2G032360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity