CsaV3_2G030200 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G030200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TPR_REGION domain-containing protein
Location	chr2: 19819270 .. 19821248 (-)
RNA-Seq Expression	CsaV3_2G030200
Synteny	CsaV3_2G030200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAAAAAATATTTATAAATATAGGAACGATATATATGAAAGGTGACTATAAACTAATATAATAAATAGTGATAAATTAATATTGAAATAGTAGTCTATTTGTCAATTGTTATTCATCTCGACTAGATAGAGTGTGATATTTTTTAAGGGCTTAAATAATAGTTAGCTTAAAAAAGAAAGGAGAAGAAAAGTTTTACTTTTAGAAAGAAAAAAATCATTTAAACGAAGCAACATCTGCCCAAATTGATTGAAATTATAATTTCCTATTAACTCTGACCGTCGCTGTAGAGTTGACGGCAAAATTAAACCGCCGCTCTAAGCAGTCCCGCCTCCGATCTTCTCCAATCCCTGACTCTGTACAGATCCACTTTTGATCGTATTCGGAGTTTATCCGATCCCCGGAATTAATCGAAAGCACAGTGAAAGAAATTGGCTGCACGCAGTTCTTTCAGAGATCGATAAACATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAATATTCCGCAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCTAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATAGCTCTGGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACACTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACAGCTCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAATGCTAGGGAGGCATTGGAACGTCTATCATCATCGCAATCAAGCTGATGTCTACTGTGATCTATGGAATGTCAACGCTAGAAGATAAGAGCATCTTTCAATTTTTCCAGGTCCAAATATCTCCTCCATTTTCGCTGATTCTTGCTAATGCCTTCCCTTAAGCCGTATAACGATTGAGATGCTGAATTGGCTCGTGAGATGAAATCCTATCTCCGATTCCCATCTCCAAGATAGGCGTTTGGAATGGGGTTTAATATTTACTTAGTTTCCTTGTCTTTGATTTAGTCTGTTGATTTACCGTAGTTTTAGTCGTAATTTATGTAAAATGAGGGATTGGAACAAACCCAGAAAGAAAATTAGTAATTAGCACGGTTAATTTTCAAAGTAGCTTTGCTTCTCTGATCCTCAAGAAATAAATTCGAAAGTTCTCAAGACGTTTATCTGATTCTGACTTTTGTAGGAAGACGAACCAAGCTTGGCTTCAAATGTCAGATGATTAATGGAAACTAATATTTCTCTTGCAGTAGATTCACCCTTTTCAATTCCAAGAGAATTTAAGTATTTGCACATCTCATCAAATTGTGCAAATCAAAACTTGTTAAGTTTTACTTTCACTTTTTGTTGGATGCCCAAAGATGAGCCATGCCTGCATCCATGGGTTCATTTGACAAACACAACCATATTTGAATTACCACTTCGAGGAATCTTTATCAATTTTTGTTTGAAGGAATATTATGGGCTTCCGAACAAAGCTCGTTATAGTCAAAAGAATGATTACTCAAACACATCACTGTCTATGGGTTGTTTGAATTATTTGGAAAAATATTTTGGGAATTGTTTTTTCTTTTTTCAAATTTATTGTCATATGAAGATTAATCCATTCATTCACCAAGTCCACCTCAACCACAGATTAAAAT

mRNA sequence

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAATATTCCGCAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCTAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATAGCTCTGGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACACTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACAGCTCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAATGCTAGGGAGGCATTGGAACGTCTATCATCATCGCAATCAAGCTGA

Coding sequence (CDS)

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAATATTCCGCAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCTAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATAGCTCTGGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACACTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACAGCTCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAATGCTAGGGAGGCATTGGAACGTCTATCATCATCGCAATCAAGCTGA

Protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSNAREALERLSSSQSS*

Homology

[Close]

BLAST of CsaV3_2G030200 vs. NCBI nr
Match: XP_004152601.1 (uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical protein Csa_021843 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 2.7e-101
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSSQSS 215
           REEAKKAYEEALNIEPRLSNAREALERLSSSQSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSSQSS 214

[Close]

BLAST of CsaV3_2G030200 vs. NCBI nr
Match: XP_008444918.1 (PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 9.5e-99
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           REEAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. NCBI nr
Match: XP_038884950.1 (uncharacterized protein LOC120075535 [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 8.9e-97
Identity = 206/211 (97.63%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 5.6e-91
Identity = 195/211 (92.42%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothetical protein SDJN03_18077, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 194/211 (91.94%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL
Match: A0A0A0LPL8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSSQSS 215
           REEAKKAYEEALNIEPRLSNAREALERLSSSQSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSSQSS 214

[Close]

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL
Match: A0A5A7VBU3 (TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004320 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           REEAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL
Match: A0A1S3BC86 (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           REEAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL
Match: A0A6J1GK03 (uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC111454602 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.9e-91
Identity = 194/211 (91.94%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL
Match: A0A6J1KRQ5 (uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 193/211 (91.47%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of CsaV3_2G030200 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 89/201 (44.28%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 3   TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPS 62
           T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P 
Sbjct: 4   TETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPK 63

Query: 63  RSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVAKS 122
           +S + SLA+  + EA+  IA+ P DAA HI++ALALD  G  TSAL+S D AL+    KS
Sbjct: 64  KSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKS 123

Query: 123 LSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTL---SQNANSYYWLGKCYETKK 182
           LS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K 
Sbjct: 124 LSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKG 183

Query: 183 LREEAKKAYEEALNIEPRLSN 201
           L+E+A+ A+ EAL  +P   N
Sbjct: 184 LKEKAQWAFNEALKAQPSSVN 204

The following BLAST results are available for this feature:

BLAST of CsaV3_2G030200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152601.1	2.7e-101	100.00	uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical ...	[more]
XP_008444918.1	9.5e-99	99.05	PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR...	[more]
XP_038884950.1	8.9e-97	97.63	uncharacterized protein LOC120075535 [Benincasa hispida]	[more]
XP_023537835.1	5.6e-91	92.42	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_022951869.1	1.6e-90	91.94	uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothet...	[more]

BLAST of CsaV3_2G030200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G030200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPL8	1.3e-101	100.00	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 ...	[more]
A0A5A7VBU3	4.6e-99	99.05	TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BC86	4.6e-99	99.05	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
A0A6J1GK03	7.9e-91	91.94	uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KRQ5	1.0e-90	91.47	uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615...	[more]

BLAST of CsaV3_2G030200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	1.3e-34	44.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 51..121 e-value: 2.1E-5 score: 26.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..214 e-value: 3.9E-10 score: 41.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..201
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 165..196 e-value: 8.0E-7 score: 28.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 10.5614
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 4..208
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 4..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G030200.1	CsaV3_2G030200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding