CsaV3_2G029760 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G029760
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 19487852 .. 19488455 (+)
RNA-Seq ExpressionCsaV3_2G029760
SyntenyCsaV3_2G029760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACCAGTAAATAGCTTTTTGGGAAAGAAAATTATGAAAGTGAAATAAAATTAAAAGGAAAGGGGAAAAAGAGAGAGAGAGAAATTAGGTTTAGGGTGTGAAACTCATTTATATGCCAGCTGGGAGGTCCAGTTAGACTTTCACTGGAAGAGGAGAGGTGGTGGGTTGATACTGGCTACCGGTTACCGGCTATGAAGGGTTTAGGCAATACGACGGCTCAACGTGGTATTATTAGAGAGGATAAAAATTGGGAGCGGGAGAGAGAGAGAGAGCGCGTCATATATCACGTGCAGGTCACGTGTTATTCCCCCCCTTCCACCCCCACACACCACACCACCACAATTCAGTATTCACCACCATTGGATGCCCATTGCCAGTTGGATTCTTTTACGCCTCTCGATGAATTTACATTCATGCACTGCCTCCAGCCTGTCCGTCTCCCCAACGTCTATTTCCACCTTCCCCCCTTTTCCCATTTTGCCCCTACCTCCCGAGGTCTTTTTTTGTAATTTGGATATTATTCGTTACCTACTGTACCTAAGCTGTAACGCTCTTTGTTTCGTAGCAAAATTGAGAAGAAAAAAGAAAAAAGAAAAAAGAA

mRNA sequence

ATGGGACCACTGGGAGGTCCAGTTAGACTTTCACTGGAAGAGGAGAGGTGGTGGGTTGATACTGGCTACCGGTTACCGGCTATGAAGGGTTTAGGCAATACGACGGCTCAACGTGGTATTATTAGAGAGGATAAAAATTGGGAGCGGGAGAGAGAGAGAGAGCGCGTCATATATCACGTGCAGGTCACGTGTTATTCCCCCCCTTCCACCCCCACACACCACACCACCACAATTCAGTATTCACCACCATTGGATGCCCATTGCCAGTTGGATTCTTTTACGCCTCTCGATGAATTTACATTCATGCACTGCCTCCAGCCTGTCCGTCTCCCCAACGTCTATTTCCACCTTCCCCCCTTTTCCCATTTTGCCCCTACCTCCCGAGGTCTTTTTTTGTAA

Coding sequence (CDS)

ATGGGACCACTGGGAGGTCCAGTTAGACTTTCACTGGAAGAGGAGAGGTGGTGGGTTGATACTGGCTACCGGTTACCGGCTATGAAGGGTTTAGGCAATACGACGGCTCAACGTGGTATTATTAGAGAGGATAAAAATTGGGAGCGGGAGAGAGAGAGAGAGCGCGTCATATATCACGTGCAGGTCACGTGTTATTCCCCCCCTTCCACCCCCACACACCACACCACCACAATTCAGTATTCACCACCATTGGATGCCCATTGCCAGTTGGATTCTTTTACGCCTCTCGATGAATTTACATTCATGCACTGCCTCCAGCCTGTCCGTCTCCCCAACGTCTATTTCCACCTTCCCCCCTTTTCCCATTTTGCCCCTACCTCCCGAGGTCTTTTTTTGTAA

Protein sequence

MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHVQVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPFSHFAPTSRGLFL*
Homology
[Close]
BLAST of CsaV3_2G029760 vs. NCBI nr
Match: KGN62700.1 (hypothetical protein Csa_022296 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 1.7e-74
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV 60
           MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV
Sbjct: 1   MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV 60

Query: 61  QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF 120
           QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF
Sbjct: 61  QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF 120

Query: 121 SHFAPTSRGLFL 133
           SHFAPTSRGLFL
Sbjct: 121 SHFAPTSRGLFL 132

[Close]
BLAST of CsaV3_2G029760 vs. ExPASy TrEMBL
Match: A0A0A0LL87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369010 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 8.3e-75
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV 60
           MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV
Sbjct: 1   MGPLGGPVRLSLEEERWWVDTGYRLPAMKGLGNTTAQRGIIREDKNWERERERERVIYHV 60

Query: 61  QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF 120
           QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF
Sbjct: 61  QVTCYSPPSTPTHHTTTIQYSPPLDAHCQLDSFTPLDEFTFMHCLQPVRLPNVYFHLPPF 120

Query: 121 SHFAPTSRGLFL 133
           SHFAPTSRGLFL
Sbjct: 121 SHFAPTSRGLFL 132

The following BLAST results are available for this feature:
BLAST of CsaV3_2G029760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62700.11.7e-74100.00hypothetical protein Csa_022296 [Cucumis sativus][more]
BLAST of CsaV3_2G029760 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G029760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL878.3e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369010 PE=4 SV=1[more]
BLAST of CsaV3_2G029760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G029760.1CsaV3_2G029760.1mRNA