CsaV3_2G029400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G029400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	SAUR-like auxin-responsive protein family
Location	chr2: 19261263 .. 19261816 (+)
RNA-Seq Expression	CsaV3_2G029400
Synteny	CsaV3_2G029400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGTTACCTCTTCTCTTCCCCCATAAATAACGAACCCCATTTCCTCATTTTTCTTCAAATTCTCATTCTCCAAAACAAGAAACCAAATCAAAATCATTTTATTTTTCTCATCAATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAAAACAGACTCGAACTCAATGGTTTTCCTTTTTCTTGTTTAGACTGTGAATCTAACTGTATTTAGGGTTAGGGAGAGAATAATTTTCTCTCC

mRNA sequence

ATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAA

Coding sequence (CDS)

ATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAA

Protein sequence

MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR*

Homology

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BLAST of CsaV3_2G029400 vs. NCBI nr
Match: XP_004152658.1 (auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical protein Csa_021944 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60
           MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60

Query: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of CsaV3_2G029400 vs. NCBI nr
Match: XP_008444786.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNT--HLQC-GGGEEIPVDVPKGHFV 60
           MAVSTKLTHTAVVKQIKKRCSSLRI KKNKNNNNNN   HLQC GGGEEIPVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSH MGLTIPCEEQVF+SLTSML
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of CsaV3_2G029400 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 3.7e-49
Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60
           MAVSTKLT TAVVKQIKKRCSSLRI      N N NTHLQCGGG+EIPVDVPKGHFVVYV
Sbjct: 1   MAVSTKLTQTAVVKQIKKRCSSLRI------NKNKNTHLQCGGGDEIPVDVPKGHFVVYV 60

Query: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           SENRSRYIVPLTFLTRPEFQILLQLAEEEFGF+HNMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHNMGLTIPCEEQVFQSLTSMLR 109

[Close]

BLAST of CsaV3_2G029400 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 88/110 (80.00%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGE-----EIPVDVPKGHFVVYVSENRS 70
           AVVKQI KRCS LR      +N N N  LQCGGG      EIPVDVPKGHFVVYVSENRS
Sbjct: 2   AVVKQIMKRCSGLR------SNKNKNNQLQCGGGAGAGAGEIPVDVPKGHFVVYVSENRS 61

Query: 71  RYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           RYIVPLT LT PEFQILLQLAEEEFGFSH+MGLTIPCEEQVFQSLTSMLR
Sbjct: 62  RYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105

[Close]

BLAST of CsaV3_2G029400 vs. NCBI nr
Match: XP_022962125.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36
Identity = 87/116 (75.00%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCG-----------GGEEIPVDVPKGHFVVY 70
           AVVKQI KRCS LR      +N N N  LQCG           G  EIPVDVPKGHFVVY
Sbjct: 2   AVVKQIMKRCSGLR------SNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVY 61

Query: 71  VSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           VSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH+MGLTIPCEEQVFQSLTSMLR
Sbjct: 62  VSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEE---IPVDVPKGHFV 60
           M  ++KLT TA++KQI KRCSSL   KKN            GGG +   +P+DVPKGHF 
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSL--GKKN------------GGGYDEDCLPLDVPKGHFP 63

Query: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           VYV ENRSRYIVP++FLT PEFQ LLQ AEEEFGF H+MGLTIPC+E VFQ+LTSM+R
Sbjct: 64  VYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 8   THTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSENRSRY 67
           +  A +KQI KRCSSLR   K KN N    + +    +++P DVPKGHF VYV  NRSRY
Sbjct: 12  SQAASIKQIVKRCSSLR---KMKNVNGCYYNQE----DDLPQDVPKGHFPVYVGPNRSRY 71

Query: 68  IVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           IVP+++L   EFQ LL+LAEEEFGF H+MGLTIPC+E  F+SL SM R
Sbjct: 72  IVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

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BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.6e-21
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 4   STKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSEN 63
           S K T    +K+I K+CSS       KNN+++           +P DVPKGHFVVYV E 
Sbjct: 7   SHKQTQALAIKKIIKKCSSF-----GKNNDDSG----------LPNDVPKGHFVVYVGER 66

Query: 64  RSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           R+RYIVP++ L  P FQ LLQ +EEEFGF+H+MG+ IPC+E  F S  SM+
Sbjct: 67  RNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 49  VDVPKGHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSH-NMGLTIPCEEQVF 108
           VDV KG+  VYV E   R+++P+++L +P FQ LL  AEEEFG+ H N GLTIPC E VF
Sbjct: 23  VDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVF 82

Query: 109 QSLTSML 115
           Q +TS L
Sbjct: 83  QHITSFL 89

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 50  DVPKGHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNM-GLTIPCEEQVFQ 109
           D PKG+  VYV E   R+++P+++L +P FQ LL  AEEEFG+ H M GLTIPC E VFQ
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 110 SLTSML 115
            +TS L
Sbjct: 76  CITSCL 81

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BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60
           MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60

Query: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52
Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNT--HLQC-GGGEEIPVDVPKGHFV 60
           MAVSTKLTHTAVVKQIKKRCSSLRI KKNKNNNNNN   HLQC GGGEEIPVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSH MGLTIPCEEQVF+SLTSML
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL
Match: A0A1S3BB62 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.1e-52
Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNT--HLQC-GGGEEIPVDVPKGHFV 60
           MAVSTKLTHTAVVKQIKKRCSSLRI KKNKNNNNNN   HLQC GGGEEIPVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSH MGLTIPCEEQVF+SLTSML
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-36
Identity = 87/116 (75.00%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCG-----------GGEEIPVDVPKGHFVVY 70
           AVVKQI KRCS LR      +N N N  LQCG           G  EIPVDVPKGHFVVY
Sbjct: 2   AVVKQIMKRCSGLR------SNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVY 61

Query: 71  VSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           VSENRSRYIVPLT LT PEFQILLQLAEEEFGFSH+MGLTIPCEEQVFQSLTSMLR
Sbjct: 62  VSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-36
Identity = 86/109 (78.90%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQC-----GGGEEIPVDVPKGHFVVYVSENRS 70
           AVVKQI KRCS LR      +N N N  LQC     GG  EIPVDVPKGHFVVYVSENRS
Sbjct: 2   AVVKQIMKRCSGLR------SNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRS 61

Query: 71  RYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           RYIVPLT LT PEFQILLQLAEEEFGFSH+MGLTIPCEEQVFQSLTSML
Sbjct: 62  RYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104

[Close]

BLAST of CsaV3_2G029400 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEE---IPVDVPKGHFV 60
           M  ++KLT TA++KQI KRCSSL   KKN            GGG +   +P+DVPKGHF 
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSL--GKKN------------GGGYDEDCLPLDVPKGHFP 63

Query: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
           VYV ENRSRYIVP++FLT PEFQ LLQ AEEEFGF H+MGLTIPC+E VFQ+LTSM+R
Sbjct: 64  VYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CsaV3_2G029400 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 138.3 bits (347), Expect = 4.0e-33
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60
           M  + KLT TA++KQI KRCSSL   + N    + N           P++VPKGHFVVYV
Sbjct: 3   MKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGS---------PLNVPKGHFVVYV 62

Query: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 116
            ENR RY+VP++FLTRPEFQ+LLQ AEEEFGF H+MGLTIPCEE VF+SLTSMLR
Sbjct: 63  GENRVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of CsaV3_2G029400 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 5   TKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSENR 64
           +KLT T ++KQI KRCSSL    K +++  N+TH     G+ +P+DVPKGHFVVYV  NR
Sbjct: 7   SKLTQTTMIKQILKRCSSL---GKKQSSEYNDTHEH--DGDSLPLDVPKGHFVVYVGGNR 66

Query: 65  SRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSL-TSMLR 116
            RY++P++FLTRPEFQ+LLQ AEEEFGF HNMGLTIPCEE  F+SL TSML+
Sbjct: 67  VRYVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSMLQ 113

[Close]

BLAST of CsaV3_2G029400 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-32
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 4   STKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSEN 63
           S+KLT TA++KQI KRCSSL      KN        QC   + +PVDVPKGHF VYV E 
Sbjct: 6   SSKLTQTAMLKQILKRCSSLA-----KN--------QCYDEDGLPVDVPKGHFPVYVGEK 65

Query: 64  RSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSML 115
           RSRYIVP++FLT P+F+ LLQ AEEEFGF+H+MGLTIPCEE VF+SLTSM+
Sbjct: 66  RSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of CsaV3_2G029400 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-31
Identity = 73/113 (64.60%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 4   STKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSEN 63
           S+KLT TA++KQI KRCSSL   KK           QC   E +P+DVPKGHF VYV E 
Sbjct: 6   SSKLTQTAMLKQILKRCSSL--GKK-----------QCYDEEGLPLDVPKGHFPVYVGEK 65

Query: 64  RSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNM-GLTIPCEEQVFQSLTSMLR 116
           R+RYIVP++FLT PEF ILLQ AEEEFGF H+M GLTIPCEE VF SLTSM+R
Sbjct: 66  RTRYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

The following BLAST results are available for this feature:

BLAST of CsaV3_2G029400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152658.1	2.2e-57	100.00	auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical prote...	[more]
XP_008444786.1	1.0e-51	94.02	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-ind...	[more]
XP_038886317.1	3.7e-49	90.43	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
KAG6598492.1	1.5e-37	80.00	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962125.1	4.7e-36	75.00	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]

BLAST of CsaV3_2G029400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	2.5e-32	63.56	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.8e-25	58.33	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	7.6e-21	49.55	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33083	2.1e-15	56.72	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	2.8e-15	56.06	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CsaV3_2G029400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRM7	1.1e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]
A0A5A7VD05	5.1e-52	94.02	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BB62	5.1e-52	94.02	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1	[more]
A0A6J1HE76	2.3e-36	75.00	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A6J1K8F3	3.0e-36	78.90	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083...	[more]

BLAST of CsaV3_2G029400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	1.8e-33	63.56	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	4.0e-33	62.61	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	6.8e-33	63.39	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	5.8e-32	63.96	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	3.7e-31	64.60	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 24..114 e-value: 9.3E-27 score: 93.0
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 5..115
None	No IPR available	PANTHER	PTHR31374:SF289	BNAA02G17300D PROTEIN	coord: 5..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G029400.1	CsaV3_2G029400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin