CsaV3_2G028910 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G028910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr2: 18937974 .. 18939825 (+)
RNA-Seq Expression	CsaV3_2G028910
Synteny	CsaV3_2G028910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATTGTATATTACAACATGAAATTTTTCATAACTTATGTAGCTTATAAAGGGTGGTAAAGTTTTATGGGCTTTTTTTTTTAATCCAAGAGATTCTTAAAAGAGAAAAAAGGGCAGAAAAGGAAGAGATATAAGAGATAAAATTGGAAAATCAAAAGAAGTGTTGTAACAAAATTCAAAGATGAATACAATATATTCAAAATTTATGGACGGAATAGAGATAGAGACGATGATTAGATACACCACACTAAAGTCGTAATTTCCCCAAAATAGAATTGGGATATTAGGGGTAAAGCCACGTGAGAATGGCTAGACGCCGTCGGACCCATGTCAAAACGAACGCACGCGCGGCGGTCCTGGTCCCACCTAGAACGAGTCGCTGTGGTCTGGATTACTCTCGGCCCATGTGGCTCTGCCCCAACAAATCCCTTTTACATCATTTCTTCTAAACTAAAATTAAATAAAACCTAAATAATGATAATAATCACTTTTAAGTTTAACTAATCACATTTACTTAATTAATTAAATTACCTAATTTTGACCGTACAAATTCAAATTCCAACCTCTATTTAAAGAGAGAAAATTCATACTCCTCACTCTCAGTTTCTCCTTTTTTCTGTACATTTCTTCTTCTTAATTTTTTTTTCCCAACAATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGTCATTTCCATCGGGAATTACATCCGCCGCTGGAAGCTCAAATGGTTATTCGAGTTTTTCGTCTTCTTGTTCCTTGTTTCCAACCGTTCTAGTTTCTTTTCTCTCGCCGGTCCGATTCTCCACCGTTTTTTCCAGCGAATCCTCGTCGTCCTCAACAGTCATATCTTCGTTTTCATGGTTTTCCACGCTATGCTCTTCATCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCTGACCGAACCCGATTCGTCCGAGAGTCTGGTGGCTCCGCCGGTTGACGTCTCCGTCGAGGAGAAGAGCACGGAGGAGATGCCGGTTATTCAAGACTCAATCGCTGAACCTCCGGCGGAGGAGACGACGGAGATGGTAATCACTGCGGCGGATGACACGGCGGTGTTGTCGCCGTCCCCTCCAGTCCAGCATTTGAACGCTGTGATGGAAGCGGCGGAGATAATAGCGGAGGCAAAACGGTACCGGAGGACGGAATCGGAGAGATTTGAGGAGAATCAGGAAAAGAGGAAATTCAGGAGATGGAAGACGGAGATTAGGTGGAGAGAAAGCAGGGAAGAATTGACGGGATTTGTGGAATTAGTGGATGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTTATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTTTCCGGCTAAAAGAAGGATTTCAACAACTGAATGGAAGAATCCGAAAAGAAAGAGACACCAAAGGGGGGCTGAAAGGAAAGGAAAAGAAAAGGTTTCAATTGTTTTGTATTTGCAATTTAATGCCCCTGATTTGTCGGAAATTGTAATAATGCCATTTTTTCTCTTTCACCAAAAAATTTCCAATTCTCAAATTGGAACATTTTGAGAATTAAGGGATTCTCCTGTAAACCTTTTTGGATTTTCTCTTTCAATTTTCCATTTCTGGGTCAGAAATTGGACACAGGATATCAAAGAAAACCAAATGTTGTTTGTAAATACCAAAATATATTTCCCTTTTCATTATTATCAATTTACATAAATGAAATTGAAATTTGCACTTAATTTTCATTTAAAATATATTGAATTGATATTTCAGCCGACAGACAGAAATCAATGTACTTGGAAAAACAATGGACCATTTTTATTTTAA

mRNA sequence

ATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGTCATTTCCATCGGGAATTACATCCGCCGCTGGAAGCTCAAATGGTTATTCGAGTTTTTCGTCTTCTTGTTCCTTGTTTCCAACCGTTCTAGTTTCTTTTCTCTCGCCGGTCCGATTCTCCACCGTTTTTTCCAGCGAATCCTCGTCGTCCTCAACAGTCATATCTTCGTTTTCATGGTTTTCCACGCTATGCTCTTCATCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCTGACCGAACCCGATTCGTCCGAGAGTCTGGTGGCTCCGCCGGTTGACGTCTCCGTCGAGGAGAAGAGCACGGAGGAGATGCCGGTTATTCAAGACTCAATCGCTGAACCTCCGGCGGAGGAGACGACGGAGATGGTAATCACTGCGGCGGATGACACGGCGGTGTTGTCGCCGTCCCCTCCAGTCCAGCATTTGAACGCTGTGATGGAAGCGGCGGAGATAATAGCGGAGGCAAAACGGTACCGGAGGACGGAATCGGAGAGATTTGAGGAGAATCAGGAAAAGAGGAAATTCAGGAGATGGAAGACGGAGATTAGGTGGAGAGAAAGCAGGGAAGAATTGACGGGATTTGTGGAATTAGTGGATGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTTATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTTTCCGGCTAA

Coding sequence (CDS)

ATGGTTCTCAATGGATTCGATTCCGTCAAGGCCTTGAAGGTCATTTCCATCGGGAATTACATCCGCCGCTGGAAGCTCAAATGGTTATTCGAGTTTTTCGTCTTCTTGTTCCTTGTTTCCAACCGTTCTAGTTTCTTTTCTCTCGCCGGTCCGATTCTCCACCGTTTTTTCCAGCGAATCCTCGTCGTCCTCAACAGTCATATCTTCGTTTTCATGGTTTTCCACGCTATGCTCTTCATCGTTTACTCTCTCTCCCATTTGACCGACAACAAATCCGGTTCGAACCTGACCGAACCCGATTCGTCCGAGAGTCTGGTGGCTCCGCCGGTTGACGTCTCCGTCGAGGAGAAGAGCACGGAGGAGATGCCGGTTATTCAAGACTCAATCGCTGAACCTCCGGCGGAGGAGACGACGGAGATGGTAATCACTGCGGCGGATGACACGGCGGTGTTGTCGCCGTCCCCTCCAGTCCAGCATTTGAACGCTGTGATGGAAGCGGCGGAGATAATAGCGGAGGCAAAACGGTACCGGAGGACGGAATCGGAGAGATTTGAGGAGAATCAGGAAAAGAGGAAATTCAGGAGATGGAAGACGGAGATTAGGTGGAGAGAAAGCAGGGAAGAATTGACGGGATTTGTGGAATTAGTGGATGAGATGGACATCGACGATTTCAATCGGACGGTGGAGAGCTTTATAGCGGAACAGAAAATGCACATCGGCGGAAGGGTTTCCGGCTAA

Protein sequence

MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRILVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTEEMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIGGRVSG*

Homology

[Close]

BLAST of CsaV3_2G028910 vs. NCBI nr
Match: XP_011650191.1 (uncharacterized protein LOC105434756 [Cucumis sativus] >KGN62619.1 hypothetical protein Csa_021847 [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 2.3e-125
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI
Sbjct: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120
           LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE
Sbjct: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120

Query: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180
           EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE
Sbjct: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180

Query: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240
           SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG
Sbjct: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240

Query: 241 GRVSG 246
           GRVSG
Sbjct: 241 GRVSG 245

[Close]

BLAST of CsaV3_2G028910 vs. NCBI nr
Match: KAA0065217.1 (uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa])

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109
Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKALK ISIGNY RR KLKWLFEFFVFLFLVSNRSSFFSLAGPILH FFQRI
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120
           L VLNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN TEPDSSESLVAPPVDVSVEEKSTE
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPDSSESLVAPPVDVSVEEKSTE 120

Query: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180
           EMPVI+DSIAE PAEETTE+VITA DDTAVL PS PV+HLNA MEAAEII E KRYRRTE
Sbjct: 121 EMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTE 180

Query: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240
           SERFEEN+EK KFRR KTEIRWR +  ELTGFV+LVDEMDIDDFNRTVESFIAEQKMHIG
Sbjct: 181 SERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIG 240

Query: 241 GRVSG 246
           GRVSG
Sbjct: 241 GRVSG 245

[Close]

BLAST of CsaV3_2G028910 vs. NCBI nr
Match: KAG6585580.1 (hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-54
Identity = 154/283 (54.42%), Postives = 176/283 (62.19%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKA   IS+ N  RR KLKWLFEF +FLFLV +RSS FSLAGP    FF+RI
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSN--------------LTEPDSSESLV 120
           LVVLNSH FVF+VFHAMLF+VYSLSHLTDN SGSN              +T  DS ESL+
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTDAESTLDARSSHVTADDSPESLI 120

Query: 121 -------------------------APPVDVSVEEKSTEEMPVIQDSIAEPPAEETTEMV 180
                                    A PVD SV EK+TE+ PV +DSI     + TT   
Sbjct: 121 ASKDDSVDDKLVVDEKNTATALENSAAPVDDSVAEKNTEKSPVSKDSI-----DPTT--- 180

Query: 181 ITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIR 240
                 T   +P  PV HL        II E ++YRRTESERFEEN+++ K RR KTEIR
Sbjct: 181 -----TTTAPTPGSPVLHL--------IIPETRQYRRTESERFEENRQRAKLRRSKTEIR 240

Query: 241 WRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIGGRVS 245
             ESRE  T   + V+EMDIDDFNR VE FIAEQK+HIGGR+S
Sbjct: 241 REESRES-TKLRDSVEEMDIDDFNRKVERFIAEQKLHIGGRIS 258

[Close]

BLAST of CsaV3_2G028910 vs. NCBI nr
Match: KAG7020495.1 (hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-54
Identity = 154/283 (54.42%), Postives = 175/283 (61.84%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKA   IS+ N  RR KLKWLFEF +FLFLV +RSS FSLAGP    FF+RI
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSN--------------LTEPDSSESLV 120
           LVVLNSH FVF++FHAMLF+VYSLSH TDN SGSN              +T  DS ESL+
Sbjct: 61  LVVLNSHTFVFIIFHAMLFVVYSLSHSTDNNSGSNRTDAESTLDARSSHVTADDSPESLI 120

Query: 121 -------------------------APPVDVSVEEKSTEEMPVIQDSIAEPPAEETTEMV 180
                                    A PVD SV EK+TE+ PV +DSI   P   TT   
Sbjct: 121 ASKDDSVDDKLVVDEKNTATALENSAAPVDDSVAEKNTEKSPVSKDSI--DPTTTTT--- 180

Query: 181 ITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIR 240
                 T   +P  PV HL        II E ++YRRTESERFEEN+E+ K RR KTEIR
Sbjct: 181 ------TTAPTPVSPVLHL--------IIPETRQYRRTESERFEENRERAKLRRSKTEIR 240

Query: 241 WRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIGGRVS 245
             ESRE  T   + V+EMDIDDFNR VE FIAEQK+HIGGR+S
Sbjct: 241 REESRES-TKLRDSVEEMDIDDFNRKVERFIAEQKLHIGGRIS 260

[Close]

BLAST of CsaV3_2G028910 vs. NCBI nr
Match: XP_023002474.1 (uncharacterized protein LOC111496300 [Cucurbita maxima])

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-54
Identity = 148/268 (55.22%), Postives = 176/268 (65.67%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKA   IS+ N  RR KLKWLFEF +FLFLV +RSS FSLAGP    FF+RI
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSS--------------ESLV 120
           LVVLNSH FVF+VFHAMLF+VYSLSHLTDN SGSN TE +SS              ES++
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVI 120

Query: 121 APPVD-----VSVEEKSTEEMPVIQDSIAEPPAEETTEMVITAADD-----TAVLSPSPP 180
           A   D     + V++K+T  +  +   + +  AE+ TE    + D      T   +P  P
Sbjct: 121 ASKDDSVDDKLVVDKKNTTALENLAAPVDDSVAEKNTEKSSVSKDSIDPTTTTAPTPGSP 180

Query: 181 VQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRESREELTGFVELV 240
           V HL        II E ++YRRTESERFE+N+EK K RR KTEIR  ESRE      + V
Sbjct: 181 VLHL--------IIPETRQYRRTESERFEDNREKAKLRRSKTEIRREESRES-KKLTDSV 240

Query: 241 DEMDIDDFNRTVESFIAEQKMHIGGRVS 245
           +EMDIDDFNR VESFIAEQK+HIGGR+S
Sbjct: 241 EEMDIDDFNRKVESFIAEQKLHIGGRIS 256

[Close]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL
Match: A0A0A0LNN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI
Sbjct: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120
           LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE
Sbjct: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120

Query: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180
           EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE
Sbjct: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180

Query: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240
           SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG
Sbjct: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240

Query: 241 GRVSG 246
           GRVSG
Sbjct: 241 GRVSG 245

[Close]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL
Match: A0A5A7VDR7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005550 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKALK ISIGNY RR KLKWLFEFFVFLFLVSNRSSFFSLAGPILH FFQRI
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKSTE 120
           L VLNSHIFVFMVFHAMLF+VYSLSHLTDNKSGSN TEPDSSESLVAPPVDVSVEEKSTE
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPDSSESLVAPPVDVSVEEKSTE 120

Query: 121 EMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEIIAEAKRYRRTE 180
           EMPVI+DSIAE PAEETTE+VITA DDTAVL PS PV+HLNA MEAAEII E KRYRRTE
Sbjct: 121 EMPVIEDSIAEAPAEETTELVITAVDDTAVLPPSSPVRHLNAEMEAAEIIPEEKRYRRTE 180

Query: 181 SERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFNRTVESFIAEQKMHIG 240
           SERFEEN+EK KFRR KTEIRWR +  ELTGFV+LVDEMDIDDFNRTVESFIAEQKMHIG
Sbjct: 181 SERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDFNRTVESFIAEQKMHIG 240

Query: 241 GRVSG 246
           GRVSG
Sbjct: 241 GRVSG 245

[Close]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL
Match: A0A6J1KQJ8 (uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 8.0e-55
Identity = 148/268 (55.22%), Postives = 176/268 (65.67%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKA   IS+ N  RR KLKWLFEF +FLFLV +RSS FSLAGP    FF+RI
Sbjct: 1   MVLNGFDSVKA---ISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRI 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSS--------------ESLV 120
           LVVLNSH FVF+VFHAMLF+VYSLSHLTDN SGSN TE +SS              ES++
Sbjct: 61  LVVLNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVI 120

Query: 121 APPVD-----VSVEEKSTEEMPVIQDSIAEPPAEETTEMVITAADD-----TAVLSPSPP 180
           A   D     + V++K+T  +  +   + +  AE+ TE    + D      T   +P  P
Sbjct: 121 ASKDDSVDDKLVVDKKNTTALENLAAPVDDSVAEKNTEKSSVSKDSIDPTTTTAPTPGSP 180

Query: 181 VQHLNAVMEAAEIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRESREELTGFVELV 240
           V HL        II E ++YRRTESERFE+N+EK K RR KTEIR  ESRE      + V
Sbjct: 181 VLHL--------IIPETRQYRRTESERFEDNREKAKLRRSKTEIRREESRES-KKLTDSV 240

Query: 241 DEMDIDDFNRTVESFIAEQKMHIGGRVS 245
           +EMDIDDFNR VESFIAEQK+HIGGR+S
Sbjct: 241 EEMDIDDFNRKVESFIAEQKLHIGGRIS 256

[Close]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL
Match: A0A6J1CSG5 (uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013908 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 4.5e-50
Identity = 144/263 (54.75%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60
           MVLNGFDSVKA   I +GN+ RR KLKWLFE  VFLFL+S RS++FS A P+L  FF+++
Sbjct: 1   MVLNGFDSVKA---IPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQL 60

Query: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEP---------DSSESLVAPPVD 120
           + VLNSHIFVFM F+ MLF+VYSLS LT+ K  SN ++          +S ESLVAP  D
Sbjct: 61  VAVLNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSDAAHSHGNATGESPESLVAPSDD 120

Query: 121 -----VSVEEKSTEEMPVIQDSIAEPPAEETTEMVITAADDTAVLSPSP----PVQHLNA 180
                + V EK+    PV   +IA  PA E         +     SPSP    P  +  +
Sbjct: 121 SIAEILVVAEKNVVTSPVDGVAIAATPAAE------LPTEQMPFPSPSPPPIXPAPNSTS 180

Query: 181 VMEAA-EIIAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDI 240
           V EAA EII E K+YRRTESERF E +E+ KFRR KTEIR RES EE   FV  V EMDI
Sbjct: 181 VTEAAEEIIPETKQYRRTESERFAERREENKFRRSKTEIR-RESSEEPARFVRSVHEMDI 240

Query: 241 DDFNRTVESFIAEQKMHIGGRVS 245
           +DFNRTVESFIAEQK+HIG  +S
Sbjct: 241 EDFNRTVESFIAEQKLHIGRWIS 253

[Close]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL
Match: A0A6P3YRJ9 (uncharacterized protein LOC107403685 OS=Ziziphus jujuba OX=326968 GN=LOC107403685 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.7e-10
Identity = 72/251 (28.69%), Postives = 121/251 (48.21%), Query Frame = 0


Query: 6   FDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRILVVLN 65
           FD VKA K I++  Y  R KLKWLFE    LF ++  +++  +A      F ++++ V  
Sbjct: 6   FDHVKAEKAIAMRRYRLRRKLKWLFEACAALFFLTCSTTWLPIATEFCAGFSRQLIAVFK 65

Query: 66  SHIFVFMVFHAMLFIVYSLS-------HLTDNKSGSNLTEPDSSESLVAPPVDVSVEEKS 125
           SH+FVF++F+ ++F++Y+LS       HL+ + SG +L +   S S+ +  +    E  +
Sbjct: 66  SHLFVFVLFNLIIFLIYALSAQVPTEKHLSGSGSGPDLYDEFVSNSMSSRRISTGSESPA 125

Query: 126 TEEMP---------VIQDSIAEPPAEETTEMVITAADDTAVLSPSPPVQHLNAVMEAAEI 185
               P         +  +++A PP++   ++       + V + S       AV      
Sbjct: 126 PAPAPEVVFEDKQIICSENVASPPSQNNRDVAKPKGSASQVRTKS-------AVCTDTGK 185

Query: 186 IAEAKRYRRTESERFE----ENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDFN 237
               K YRRT+SE F     E  ++R+F+R  TEI        +       D+M  D+FN
Sbjct: 186 ALVVKCYRRTKSENFNLEKVEKPQRREFQRSDTEIEPGRRSSSVD------DQMSNDEFN 243

The following BLAST results are available for this feature:

BLAST of CsaV3_2G028910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650191.1	2.3e-125	100.00	uncharacterized protein LOC105434756 [Cucumis sativus] >KGN62619.1 hypothetical ...	[more]
KAA0065217.1	2.3e-109	89.80	uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]	[more]
KAG6585580.1	1.3e-54	54.42	hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7020495.1	1.6e-54	54.42	hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023002474.1	1.6e-54	55.22	uncharacterized protein LOC111496300 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G028910 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNN4	1.1e-125	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1	[more]
A0A5A7VDR7	1.1e-109	89.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1KQJ8	8.0e-55	55.22	uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300...	[more]
A0A6J1CSG5	4.5e-50	54.75	uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6P3YRJ9	2.7e-10	28.69	uncharacterized protein LOC107403685 OS=Ziziphus jujuba OX=326968 GN=LOC10740368...	[more]

BLAST of CsaV3_2G028910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 7..238
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 7..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G028910.1	CsaV3_2G028910.1	mRNA