CsaV3_2G028800 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCGTGGGGAGGGAGTGATAAATGATAATAGGAAAAAAAAAAAAAAGAAAAGAAAAAGAAAGAAAAGAAATTGGGGGAATATTAATTTTGGTTGAAACGAGGCAAAGCGAAAGCACGGATTCATCGTAGAAATTAGAAAACAAAAATCAAAGCGATTGAAGAAACGAGGCTAACGGATTCCACTTCATTCATCTTCTTCCCATTTTCGCTCTCAATTTTTTTTTTTTTTCCATCTTACTGTTCTTCAACTTCCTTCAAGGTTAGGTTTCGATTTCTTTTCTTTTCTTTTTTACCCTACTTCTTCAGTTTCTGCTGTTCATTTCCTAACTGTTCCCTTACTTCCATTGATTTATGCTTCGGATTACTCACATTCCCTTTCTGCTTTTGTTTGAAGAAGCTGTGGATTAGATCCACAATCCATTTGACTGATGCTTTTGTTTTTGCTCCTTTAGATCGTGTTTTCTTAACCTAATGCCATTTCTTTTCCCAGGGGATAAGTCTTTATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTATTCCTCTTTCCATTAGCTACTTCCTTAATTTTTTTATTTTGGGATCTGATTGCATTTTAATTTTGCAATTGGTTTTTGGTTAATTATCTAGTAACTTTGGTTCTGGCTGCTTTAGTTGAATAGATTTCGTTGCTGAAAACTATCATACGTTGCAGCATTTGGTATTCATTTCTCGCTCTTTATTTTGAAATGTTGTATAAGGAGTGCAGATAGATATATCAAATAATGTTCCGAAGACCTCACCATTGATACAACTCGAGTATTACTATTGATATACATAGATAATTTGCATTGCGAAAAGATTATATTTGTTTTACATACTCGTATAAATTGCAGGCTTTATGTTGAAAATATATATTGTATCTATATCCAATTTTTCCTTTTCCTGGGCGGAATGTGCATTAATGGATAAAAGTTTTGTTTGGTTACTTATACAGCGTAACGTGTACTTCTGTAAGTTGCTCCTTGCCAAGTGTAAACATATTTCTAAAATTTGTCATTGCATGGAGATGGGGTGACTTTGATAATTATGGTGGTGGACATGTTTTTTCTCGTCAGTTGTCATCCTTATTTCAGACACATGGCATTCTTGAGGATGTACATTCATTGAATTGTGAGGGATTACTATAAGTTATAAATGTATTAGATTTCATGAGTTGTGTGGCATTATATACTGGCTGGTTTTGATGATTCTGGTGGTCTCTTATTCTTTTCAAGTGTCAAATTATGGCGAATGCTTTGTCATTGCACGGGGTTGGAATGAAATGTGCAGTATCAGATTATACTGATATCATTTAGTTGAGTTGATATAGACTTCATGGACCCTTAAAGCCTATCTTTTCTATTTTTCAGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGGTGAGGCAACAAGAACACTTGGTTAGTGGTAATGGAGTAGGGCGAAAGTACAGATAAAACACCTTCCAGATGGAGAAAAATACTGTTACACGGGGAAAAAACCACATATACAGAGAGAGAGAGAGAGTAGCCATAAAATCCCAACCCAGGGAAAAACTGAGACACCTTTCGCATATAGATAGAACTTTTCCCGTTCTCTAATATTCGTTTAAAACCCATCCTGCTTCCTGGGACATAATTCATGAGTAGCCATGTACTACCATCCCTGAGCGAAACCAATTTTATTTGACTAATAGTTCAGTGAATCCATTAGATCTTTGGAAGATAAGTTACAAAAGGCATTTAGAAACTATATACAATGGTCGTTAGGAAGGAGGATTGAGAGTGAAAGATATCCTTCTCATTCCCAAGACAAAACACTGAGGTGGCGTTTGGCTGCCCCACCGACTTCATAAACTGAATTTAAATAGCTCAAACTAACCCTGCTAATTTCAATCGTATTCACTTTGGTTACGAACTTTCTCAAGCAGCTTCATCATCACGACTCAACATCCAAAAATACTTTCTAACTTCAATATATTACCTTTAGACTTTATAACTCAACTTAGCCCTTCAAACACCTGTGAAATATACATTTTCCTTTCCATCCCATGGCAAGAGATAGGGAGAGGGGTAGTGGTAATTCTGAAAGGTGGGTTAAAATAGTGTAACAATTTAACTTTTGCCTTTTTTTTTTTTGTTGTGGCAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAAAGGTTTCATCATTCCCATCTGGTTAGTAGTAGTAGACAGAAGAAGCGTGCAGCATTCCCAACTCTTCTTTCAGTTTTTCCTAAACAAGCACTTGGTCTTCTTTGTCAGACAAGTACGAATTCAGGACACTGGTTGAAGAGAAGAAACAGCTTTTATGGTTGGTGGTAATATGGATATTGTAATAGCTTTTTTTCTCAATTCTGTGTTGACCACAATACACATCCTATATGGACTTTTCTCTTCTTGTGTTTGTTTTGTCTTTAGGATTCTTTAGGCTCTATTACTATAGAATATCGCTTATAATTTTTCCTTTTTCTTGTATCCTTATTTTTTTTTTCTGCTGGGGAAGCAAAAAAATTAAATGTCCAATTAATATTTGTTGGGTTCTGATTTTCTTGCCAGTTTTCTTTTGCTTTCAAATGATAG ATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAA ATGGAAGGAGTTGGGGGCGACACGGCATCTGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTTCTAGAGCATTTCAATATTACTTGGATCGATCCACTCCTCACCCGGTCCAGAGGTGGTTGGGGACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTATGTTCAAGGGTTTTATGTTGTTTCCTATGGATTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTTTCGCCCAAGGTTGATCCTGAGCTCGATGTCTTGGATGGAGCTTCCTTGCCTACCAAAGGTTCTGATGAGTTTAAGCCTTTCATACGCCGGCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCGTTCCTCATGACCTTCTTCTCGCTATTCGATGTTCCGGTTTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAAATCATGCACATGATCAAATACAAATACATTCCTTTCAGCATAGGAAAACAGAGATATACGGGAAAGAGGTCTTCTGCAAGTAGCAGTGGCGTTTCAAGAGACTAA MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAITKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYTGKRSSASSSGVSRD* Homology
BLAST of CsaV3_2G028800 vs. NCBI nr
Match: XP_004152693.1 (protein RER1B [Cucumis sativus] >XP_011649627.1 protein RER1B [Cucumis sativus] >KGN62608.1 hypothetical protein Csa_022171 [Cucumis sativus]) HSP 1 Score: 387.1 bits (993), Expect = 8.9e-104 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. NCBI nr
Match: XP_008444725.1 (PREDICTED: protein RER1B-like [Cucumis melo] >XP_008444726.1 PREDICTED: protein RER1B-like [Cucumis melo]) HSP 1 Score: 384.4 bits (986), Expect = 5.8e-103 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. NCBI nr
Match: XP_038885596.1 (protein RER1B-like [Benincasa hispida]) HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102 Identity = 191/194 (98.45%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. NCBI nr
Match: XP_022144203.1 (protein RER1B-like [Momordica charantia] >XP_022144204.1 protein RER1B-like [Momordica charantia]) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100 Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. NCBI nr
Match: XP_022961870.1 (protein RER1B-like [Cucurbita moschata]) HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2) HSP 1 Score: 295.0 bits (754), Expect = 6.0e-79 Identity = 140/193 (72.54%), Postives = 168/193 (87.05%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.5e-74 Identity = 135/188 (71.81%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2) HSP 1 Score: 239.2 bits (609), Expect = 3.9e-62 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.7e-55 Identity = 99/183 (54.10%), Postives = 140/183 (76.50%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy Swiss-Prot
Match: Q9CQU3 (Protein RER1 OS=Mus musculus OX=10090 GN=Rer1 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50 Identity = 100/183 (54.64%), Postives = 136/183 (74.32%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy TrEMBL
Match: A0A0A0LLG7 (Protein RER1 OS=Cucumis sativus OX=3659 GN=Csa_2G361720 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy TrEMBL
Match: A0A1S3BBV8 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103487976 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 2.8e-103 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy TrEMBL
Match: A0A6J1CRM0 (Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111013953 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 7.6e-101 Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy TrEMBL
Match: A0A6J1HDF6 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111462507 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. ExPASy TrEMBL
Match: A0A6J1KLH6 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111496327 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.8e-100 Identity = 186/194 (95.88%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B ) HSP 1 Score: 295.0 bits (754), Expect = 4.3e-80 Identity = 140/193 (72.54%), Postives = 168/193 (87.05%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein ) HSP 1 Score: 278.9 bits (712), Expect = 3.2e-75 Identity = 135/188 (71.81%), Postives = 160/188 (85.11%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein ) HSP 1 Score: 239.2 bits (609), Expect = 2.8e-63 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. TAIR 10
Match: AT2G18240.2 (Rer1 family protein ) HSP 1 Score: 239.2 bits (609), Expect = 2.8e-63 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of CsaV3_2G028800 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein ) HSP 1 Score: 216.5 bits (550), Expect = 1.9e-56 Identity = 99/183 (54.10%), Postives = 140/183 (76.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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