CsaV3_2G024530 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G024530
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionCRAL-TRIO domain-containing protein
Locationchr2: 16985757 .. 16986570 (+)
RNA-Seq ExpressionCsaV3_2G024530
SyntenyCsaV3_2G024530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTACTCTTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGGCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGGTACTGAAATTAAATTACTTTTCTTGTTCTCCAAAACCAGAGTGTGTTAGTGTGTGTGTGTGTGTTGATTCATATCTGTTTTGGGTTTAGCTCGGTTTGTGAGCAGCCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCACTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATCTGCCTGGAATTTCAAACCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACTGTCGGCCGCCTCATGCTTGACGCCGAGTAAGCATTCTTCCTTCCTCCCCTGTAATTGGAACTTCCCATTTCATAAAAAGGCAAAAAGGTCAGATCTTTATGGTGGGGTTGTAATTTCTTTGACTTGCAGGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAACATGTTAGAAGGAAAGAGATGGACTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGAGTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTCGCTTGA

mRNA sequence

ATGAGCTACTCTTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGGCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGCTCGGTTTGTGAGCAGCCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCACTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATCTGCCTGGAATTTCAAACCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACTGTCGGCCGCCTCATGCTTGACGCCGAGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAACATGTTAGAAGGAAAGAGATGGACTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGAGTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTCGCTTGA

Coding sequence (CDS)

ATGAGCTACTCTTCTTCTTCTTCTTCTCTCTCCGACCAACTTCACCTCCTTGGTAAAGTCGAGGTTTTTAGACTCCATGGGCGTGATAAGGCTGGCAGGAATGTCCTCCTCATTGTCGGAAAATACTTTCCAGCTCGGTTTGTGAGCAGCCAGGCCGTGAATGTCTATTTGAAGGATAAGATTTTCCCACTCCTTAAAGATGGGCCTTTCACGGTGGTGTACATTCACACTGATGTTCATTGGACAGAGAATCTGCCTGGAATTTCAAACCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTCTCCACCCTAGCTTGCAAACCCGTGTGTTTTTTGCCACTGTCGGCCGCCTCATGCTTGACGCCGAGTTGTATAACAAGGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAACATGTTAGAAGGAAAGAGATGGACTTACCTAAGTTTGTGTATGATCATGATGAGAAATTGGAGTTCTGTCCTGTGATGGAGTCTGATTTGGAGAATGATTATCTCAGGGTTTTCTCCCCTTCGCCGTCTTTGAATTCTGGGGTGTCTACGTATTCCATGAGGTGTTTCGCTTGA

Protein sequence

MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYLRVFSPSPSLNSGVSTYSMRCFA*
Homology
BLAST of CsaV3_2G024530 vs. NCBI nr
Match: XP_031737047.1 (ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] >KGN62279.1 hypothetical protein Csa_018770 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 5.0e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60
           MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK
Sbjct: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60

Query: 61  IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 120
           IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV
Sbjct: 61  IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 120

Query: 121 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE 180
           FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE
Sbjct: 121 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE 180

Query: 181 NDYLRVFSPSPSLNSGVSTYSMRCFA 207
           NDYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 181 NDYLRVFSPSPSLNSGVSTYSMRCFA 206

BLAST of CsaV3_2G024530 vs. NCBI nr
Match: XP_016899965.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0

Query: 5   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 64
           SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 65  LKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 124
           LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 125 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYL 184
           VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYL
Sbjct: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183

Query: 185 RVFSPSPSLNSGVSTYSMRCFA 207
           RVFSPSPSLNSGVSTYSMRCFA
Sbjct: 184 RVFSPSPSLNSGVSTYSMRCFA 205

BLAST of CsaV3_2G024530 vs. NCBI nr
Match: KAA0064859.1 (ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.4e-109
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0

Query: 6   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 65
           SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL
Sbjct: 4   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 63

Query: 66  KDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 125
           KDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV
Sbjct: 64  KDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 123

Query: 126 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYLR 185
           GRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYLR
Sbjct: 124 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLR 183

Query: 186 VFSPSPSLNSGVSTYSMRCFA 207
           VFSPSPSLNSGVSTYSMRCFA
Sbjct: 184 VFSPSPSLNSGVSTYSMRCFA 204

BLAST of CsaV3_2G024530 vs. NCBI nr
Match: XP_038884815.1 (ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida])

HSP 1 Score: 370.5 bits (950), Expect = 9.2e-99
Identity = 184/207 (88.89%), Postives = 195/207 (94.20%), Query Frame = 0

Query: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60
           M+Y SSS  LSDQLHLL KVEVF+LHGRDKA RNVLLIVGKYFPARFVSSQAVNVYLKDK
Sbjct: 1   MNY-SSSPPLSDQLHLLEKVEVFKLHGRDKARRNVLLIVGKYFPARFVSSQAVNVYLKDK 60

Query: 61  IFPLLK-DGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTR 120
           IFP LK DGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIK NIEAVYFLHP LQ R
Sbjct: 61  IFPFLKDDGPFTVVYIHTDVHWTENFPGISNLKAIYEAIPITIKKNIEAVYFLHPGLQAR 120

Query: 121 VFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDL 180
           +FFATVGRLMLDAELYNKVKYVKRVEFLWE+VRRKEM+LP+FVYDHDEKLEFCPVM+SDL
Sbjct: 121 MFFATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPQFVYDHDEKLEFCPVMDSDL 180

Query: 181 ENDYLRVFSPSPSLNSGVSTYSMRCFA 207
           ENDYLR+FSPSPS+++ VSTYSMRCFA
Sbjct: 181 ENDYLRLFSPSPSVDAAVSTYSMRCFA 206

BLAST of CsaV3_2G024530 vs. NCBI nr
Match: KAG6598524.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.4 bits (908), Expect = 6.8e-94
Identity = 172/206 (83.50%), Postives = 193/206 (93.69%), Query Frame = 0

Query: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61
           S SSSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKI
Sbjct: 8   SSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKI 67

Query: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121
           FP LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIKNN++AVYF+HPSLQ R+F
Sbjct: 68  FPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPSLQARLF 127

Query: 122 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN 181
           FATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE++LP+FVYD+DEKLEFCPVM+S LE+
Sbjct: 128 FATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLES 187

Query: 182 DYLRVFSPSPSLNSGVSTY-SMRCFA 207
           DYLR+FS SPS++S VSTY SMRCFA
Sbjct: 188 DYLRLFSASPSVDSAVSTYSSMRCFA 213

BLAST of CsaV3_2G024530 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13
Identity = 40/140 (28.57%), Postives = 77/140 (55.00%), Query Frame = 0

Query: 27  GRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENLP 86
           G D+ GR V++  GK+FPA+ +  +   +YL   + P++K G + + Y HT +  T N P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 447

Query: 87  GISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEF 146
            +  L+ +Y  +P   K N++A Y +HP+  T++        M  A +  KV  +  VE 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 507

Query: 147 LWEHVRRKEMDLPKFVYDHD 167
           L+  + + ++++P ++ ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

BLAST of CsaV3_2G024530 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13
Identity = 40/140 (28.57%), Postives = 77/140 (55.00%), Query Frame = 0

Query: 27  GRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIHTDVHWTENLP 86
           G D+ GR V++  GK+FPA+ +  +   +YL   + P++K G + + Y HT +  T N P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 449

Query: 87  GISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYNKVKYVKRVEF 146
            +  L+ +Y  +P   K N++A Y +HP+  T++        M  A +  KV  +  VE 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 509

Query: 147 LWEHVRRKEMDLPKFVYDHD 167
           L+  + + ++++P ++ ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

BLAST of CsaV3_2G024530 vs. ExPASy Swiss-Prot
Match: Q66H63 (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.8e-11
Identity = 48/187 (25.67%), Postives = 88/187 (47.06%), Query Frame = 0

Query: 11  SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPF 70
           S+ L  +  ++     G D  GR V+++VG+  P   +      +Y    +   +    +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYF-IHVMDHIAVKEY 387

Query: 71  TVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV---FFATVGR 130
            +VY HT      +L     LK +Y+ + I  K N++AVYF+HP+ +++V   FF T   
Sbjct: 388 VLVYFHTLTSEYNHLDS-DFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFS- 447

Query: 131 LMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN-DYLRV 190
               + L +K+ +V  ++ L+  +  +++D P FV ++D +           EN  Y   
Sbjct: 448 ---VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-----------ENGPYFAS 497

Query: 191 FSPSPSL 194
           + PSP L
Sbjct: 508 YPPSPDL 497

BLAST of CsaV3_2G024530 vs. ExPASy Swiss-Prot
Match: Q9DBL2 (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=10090 GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 48/187 (25.67%), Postives = 88/187 (47.06%), Query Frame = 0

Query: 11  SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPF 70
           S+ L  +  ++     G D  GR V+++VG+  P   +      +Y    +   +    +
Sbjct: 329 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYF-IHVMDHIAVKEY 388

Query: 71  TVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV---FFATVGR 130
            +VY HT      +L     LK +Y+ + I  K N++AVYF+HP+ +++V   FF T   
Sbjct: 389 VLVYFHTLTSDYNHLDS-DFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFS- 448

Query: 131 LMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN-DYLRV 190
               + L +K+ +V  ++ L+  +  +++D P FV ++D +           EN  Y   
Sbjct: 449 ---VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR-----------ENGPYFAS 498

Query: 191 FSPSPSL 194
           + PSP L
Sbjct: 509 YPPSPDL 498

BLAST of CsaV3_2G024530 vs. ExPASy Swiss-Prot
Match: Q9NXN4 (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens OX=9606 GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.8e-10
Identity = 47/187 (25.13%), Postives = 87/187 (46.52%), Query Frame = 0

Query: 11  SDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPF 70
           S+ L  +  ++     G D  GR V+++VG+  P   +      +Y    +   +    +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYF-IHVMDHIAVKEY 387

Query: 71  TVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV---FFATVGR 130
            +VY HT      +L     LK +Y+ + +  K N++AVYF+HP+ +++V   FF T   
Sbjct: 388 VLVYFHTLTSEYNHLDS-DFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFS- 447

Query: 131 LMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN-DYLRV 190
               + L +K+ +V  +  L+  +  +++D P FV ++D +           EN  Y   
Sbjct: 448 ---VSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDAR-----------ENGPYYTS 497

Query: 191 FSPSPSL 194
           + PSP L
Sbjct: 508 YPPSPDL 497

BLAST of CsaV3_2G024530 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.4e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60
           MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK
Sbjct: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60

Query: 61  IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 120
           IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV
Sbjct: 61  IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 120

Query: 121 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE 180
           FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE
Sbjct: 121 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE 180

Query: 181 NDYLRVFSPSPSLNSGVSTYSMRCFA 207
           NDYLRVFSPSPSLNSGVSTYSMRCFA
Sbjct: 181 NDYLRVFSPSPSLNSGVSTYSMRCFA 206

BLAST of CsaV3_2G024530 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.5e-110
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0

Query: 5   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 64
           SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 65  LKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 124
           LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 125 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYL 184
           VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYL
Sbjct: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183

Query: 185 RVFSPSPSLNSGVSTYSMRCFA 207
           RVFSPSPSLNSGVSTYSMRCFA
Sbjct: 184 RVFSPSPSLNSGVSTYSMRCFA 205

BLAST of CsaV3_2G024530 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0

Query: 6   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 65
           SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL
Sbjct: 4   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 63

Query: 66  KDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 125
           KDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV
Sbjct: 64  KDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 123

Query: 126 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYLR 185
           GRLMLDAELYNKVKYVKRVEFLWEHVRRKEM+LPKFVYDHDEKLEFCPVM+SDLENDYLR
Sbjct: 124 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLR 183

Query: 186 VFSPSPSLNSGVSTYSMRCFA 207
           VFSPSPSLNSGVSTYSMRCFA
Sbjct: 184 VFSPSPSLNSGVSTYSMRCFA 204

BLAST of CsaV3_2G024530 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 169/207 (81.64%), Postives = 191/207 (92.27%), Query Frame = 0

Query: 1   MSYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDK 60
           M+Y S SSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDK
Sbjct: 1   MNY-SVSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDK 60

Query: 61  IFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRV 120
           IFP +KDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP  IKNN++AVYF+HP LQ R+
Sbjct: 61  IFPFVKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQARL 120

Query: 121 FFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLE 180
           FFATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE++LP+FVYDHDEKLEFCPVM+S LE
Sbjct: 121 FFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPVMDSGLE 180

Query: 181 NDYLRVFSPSPSLNSGVSTY-SMRCFA 207
           +DYLR+FS SPS++S VSTY SMRCFA
Sbjct: 181 SDYLRLFSASPSVDSAVSTYSSMRCFA 206

BLAST of CsaV3_2G024530 vs. ExPASy TrEMBL
Match: A0A6J1CST5 (uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013979 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.9e-91
Identity = 167/205 (81.46%), Postives = 184/205 (89.76%), Query Frame = 0

Query: 2   SYSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 61
           S S SS SL DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLKDKI
Sbjct: 4   SSSISSLSLPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKI 63

Query: 62  FPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 121
           FP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+R+F
Sbjct: 64  FPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLF 123

Query: 122 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLEN 181
           FATVGR ML A LYNK+KYVKRVEFLWE+VRRKEM+LPKFVYDHD+KLEFCPV+ S LEN
Sbjct: 124 FATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLEN 183

Query: 182 DYLRVFSPSPSLNSGVSTYSMRCFA 207
           DYLRVFS  PSL+S V TYSMRCFA
Sbjct: 184 DYLRVFSAVPSLDSPVPTYSMRCFA 208

BLAST of CsaV3_2G024530 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 231.9 bits (590), Expect = 4.7e-61
Identity = 104/202 (51.49%), Postives = 153/202 (75.74%), Query Frame = 0

Query: 5   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 64
           SS  S  +Q  L+ K+E+F++HGRDK GR +L I+GK+FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 65  LKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 124
           L   PF V+Y+HT V  +EN PGIS L+AIY+AIP+ +++N++ VYFLHP LQ+R+F AT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 125 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYL 184
            GR +    LY K++Y+ RV++LWEHVRR E+++P+FVYDHD+ LE+ P+M+   E+D+ 
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

Query: 185 RVFSPSPSLNSGVSTYSMRCFA 207
           RVF+   +++S VS++SMRC +
Sbjct: 182 RVFA-GAAVDSSVSSFSMRCIS 202

BLAST of CsaV3_2G024530 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.5e-38
Identity = 77/181 (42.54%), Postives = 118/181 (65.19%), Query Frame = 0

Query: 17  LGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLLKDGPFTVVYIH 76
           L  ++ F L G D++G  +  IVGKYFPAR VS++ +  Y+  KI     +GP  +VY+H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 77  TDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATVGRLMLDAELYN 136
           + V   +N PGI+ L+ IYE +P  IK+ ++ VYF+HP L++R+  AT+GRL+L   LY 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 137 KVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDYLR---VFSPSPSL 195
           K+KYV R+++LWE +++ E+++P FV +HD  LE  P+ +  +E D  +   V S S SL
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQSSSFSL 228

BLAST of CsaV3_2G024530 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 39/164 (23.78%), Postives = 91/164 (55.49%), Query Frame = 0

Query: 3   YSSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIF 62
           Y + ++S++  L  + ++++    G D  G  V+++VG +F  R +  +   +Y+  +  
Sbjct: 382 YLAKANSIN--LSEIAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFE 441

Query: 63  PLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFF 122
           P+++  P+++VY H+     +  P +  +K + + +    + N++A+Y LHP+   +   
Sbjct: 442 PVIQK-PYSIVYFHSAAS-LQVQPDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATI 501

Query: 123 ATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHD 167
            T+ +  +D  ++ KV Y  R+  L+++V R+++ +P FV+ HD
Sbjct: 502 LTM-QFFVDNVVWKKVVYADRLLQLFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031737047.15.0e-113100.00ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] ... [more]
XP_016899965.12.0e-10998.51PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumi... [more]
KAA0064859.14.4e-10998.51ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var.... [more]
XP_038884815.19.2e-9988.89ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida... [more]
KAG6598524.16.8e-9483.50Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q7JUR66.1e-1328.57Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1[more]
Q292F96.1e-1328.57Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15... [more]
Q66H639.8e-1125.67Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX... [more]
Q9DBL21.3e-1025.67Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=1009... [more]
Q9NXN42.8e-1025.13Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens OX=9606... [more]
Match NameE-valueIdentityDescription
A0A0A0LML62.4e-113100.00CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 P... [more]
A0A1S4DW799.5e-11098.51ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX... [more]
A0A5A7VHB12.1e-10998.51Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo va... [more]
A0A6J1KC433.1e-9281.64protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1[more]
A0A6J1CST59.9e-9181.46uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
AT4G35750.14.7e-6151.49SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT3G10210.12.5e-3842.54SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT1G69340.11.2e-1123.78appr-1-p processing enzyme family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 16..165
e-value: 0.0025
score: 27.1
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 32..167
e-value: 3.4E-27
score: 95.4
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 22..161
e-value: 1.19461E-7
score: 47.3798
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 17..169
e-value: 6.8E-25
score: 89.4
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 21..154
NoneNo IPR availablePANTHERPTHR11106:SF101PROTEIN, PUTATIVE-RELATEDcoord: 4..206
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 4..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G024530.1CsaV3_2G024530.1mRNA