CsaV3_2G021030 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G021030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ras-related protein RABC2a-like
Location	chr2: 16027660 .. 16031620 (+)
RNA-Seq Expression	CsaV3_2G021030
Synteny	CsaV3_2G021030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAATGTAAAAGAAAAGAAAAAAAAATTGAAAATTCGTGAAGACTTTTTTCCTTTTTCATACGAACAATTGAACAAAGAGACAAATAATGGGTGTTGTTGCAGGCCATAGAAGTAAACAAAAAGCGGAGAGCCCATCGATGACTAGTTGTACACACGTACACTACCGCCTCTCGCCAGCTCCTTCATTGTTACACTTCCATTCTTCTCAAAACGAATTATTTCTCTCTTTTCCCAATGATTTTGATTTCTTCTTCTTCTTCTTCTTCTTTCTGAGAAAAGGTTACTCTCAAAGAAACTTTAAAAGGGGTGGAACAGAAAAAAGGTTGCTTGTTTTGCTTGTTTGTGAGTTGTGAGGTAGAAGAAGAAGAAGAAGAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTCTCTCTCTCTCTCTATATATATATGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCATGTTTTGATGATTAATTCTCATACCCAGATGCACCATTTCTGAGTTTTGTTCATATTTTAATCCTCAAAGAAATCTCGATAGCTCTGTTGGTTGGTTGGACATATGTTGATCAGATACTCTTATTTTTTCTTCTTCTTTGTGGTTACTTTGCTGTTTATAGTTTTCTGATTGATTTCTGATATTTCAAGTTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGAGCTAGTGGCTTTGAACCAACTTTGTGGTTTAGTAAAATTTGTTCCCATATACTTGTTGTTTAACAAGTATCGAGATGATTAAATTTACCACAACGCATTTGGGCTTTTAGGTTCATTGGTGAATTAACATGTACTAGAGCAGGACGTTTTGTGTTTGAAATATTGTCATTTCCACACTATTAATATTAATTTTCATTTGTTGGGTATTTTAGGAATTCTCAAGCCCATATCACAAGTGAGAGAAGTGTTAAAACGTTGATATAATTAAATTTACCATAACCAATCAACTAAGTTTTGAGTTTAGGATCATTTAGCAATTCATGACTTAGGAGGGCTATTGTGTCCTTCGAAAGAGCAGATTATACTTGGTGATGCAGGTGCAGGGTGCCCTTAAGGTTTTCATCATTGAGGAGTTTGTAGTGACAATTAAAAGGTCGCCTAGAGAGAGTAGTTTTTTTTTTTTTCTTTCTTTCTCAAACAATTAATTTTTGTGAGAGAAGCTTGTGATTATCATGGTTTATGGATTGGACTGTAAATTGTGCATCGCAAATGTTTGTAATGCATCACTCCCCATTTTAATCACTACTGCACAAAGTTCCATGTCCCATTTAAGTTTAAAATACTGTTGCAACAAAAAGCAAGAATATTATGTAAGATGGATTGGATGGTTGATACTATTTTAACCTTACAACTCCTCCCTTCCTCTGTTTAAGTGTGCTGCGGAGAAGCAGCCTTCTTTAACTTCCCGTTGCTCTCGTGTAATCTCCATTTTGTGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGGTAACTGGATGATTGACTAGTTCTTTCTGGTTACATTTTTACTATTTTACTTGTCCCAGCTTATCTACATAGGATATTTTATGAAGTTTTCTTTTTCCCATCCAACGTGAGAAAATAACAGTTGTTCAGGTGTTATAAAAAACTAATGTGATTCAATGCTCTTTGTCGAGGGTTTTCTTTTCCCCATTTCGTTTACGACACTTGCCAGTTTGATGCTTTCGAGCATGTCTTTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGAGACAAAAATTCTCTTTCCACAATTGTCCTGAAAATAAACTTCGAAAGTTTAATCAAGACTCTGTTCAATGATATTAAATGAAAAACAATCAGAATTTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTAAAGAGACTGAGAATCATGCTTCACCTTCATCTTTTATATTCTCTCATACAGACAGTTAATAGAAGTTGAGGCATTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAGCAGTTGGCTGTTTTATTTTCCGTCATGCCAACAACATCTGACACCTTTTTTCTCCTCATTTATGTTGTGTTCTTTTTCCATGTTTTCTTTCTTGCGTTTTATAAGTATCCGATATCTTTCTATTTTGGAAACTATCTCTCATGCCATGTTTTCTCACCATTGAATGTTTTGAATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCATTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTATTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAACTATCATGCATTGGACAACATTGATAATAGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGCCATGTTCACTGAATATTATTGACAGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGGTAACACTCTTAATTGTTATAGTGGAACTAAATGTCGACAGTGCTCCTAAGTATGGTCACTGCACAGCGTACACCGGGTGATTTGAAAAATTGGGAAAAAGAGGTGTGTTCAAAACTATTGAGGGAGAAGGGGTGTCTTTTTTATGTCATTTTGTGGAGTGGGTCCCACTAGCTATAAATTATTATTATTACTATTAGTACTACTACTGAAAACTTTCATTTATTTTCCATGTTGGGTTGGCTGTAAAGAACGATCGAAACCCGATCTTCAATGCCAAATATATTTTATTTCATGGCCTTTGGGCATGGTCTAAGTGGTTTATCGTATATAATCCAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTGTAGAAGCTTCCTTATACTTTGGTCTTAAATCTATAGAATGCTTTAAATAATTCTCCTAAAGTGATGAAGTGGAGAACTTTGATCATTAATTGTCTATTGATATATATATTTGTAAGATATATCAAGAAATTCATTT

mRNA sequence

ATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH*

Homology

[Close]

BLAST of CsaV3_2G021030 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 430.6 bits (1106), Expect = 7.8e-117
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
           RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 216
           VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of CsaV3_2G021030 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 417.9 bits (1073), Expect = 5.2e-113
Identity = 204/215 (94.88%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
           RECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 216
           VPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of CsaV3_2G021030 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 200/215 (93.02%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
           RECIKILVGNKVDRGS+RAVTTEEGMEVAK+HKSLFLECSARTRENVDRCF+ELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 216
           VPSLLENGSVVVKQKILD T+ARK  E NDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDNTRARK--EANDRGCCH 213

[Close]

BLAST of CsaV3_2G021030 vs. NCBI nr
Match: TYJ99964.1 (ras-related protein RABC2a-like [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 8.1e-106
Identity = 203/261 (77.78%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI------------- 61
           MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI             
Sbjct: 1   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGEPLCVLRRSQLY 60

Query: 62  ----------------------------------GVDFKIKMVTVGGKKLKLTIWDTAGQ 121
                                             GVDFKIKMVTVGGK+LKLTIWDTAGQ
Sbjct: 61  LVMQVQGALKFAGEKQPSLTSRCSRVISISCIASGVDFKIKMVTVGGKRLKLTIWDTAGQ 120

Query: 122 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDR 181
           ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNKVDR
Sbjct: 121 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 180

Query: 182 GSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQ 216
           GS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+VVKQ
Sbjct: 181 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 240

[Close]

BLAST of CsaV3_2G021030 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 193/214 (90.19%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 215
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 212

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 149/214 (69.63%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           EC+++LVGNKVDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++CF+EL+ K+MEV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDR-GCC 215
           PSLLE GS  VK+ IL   + + E + N + GCC
Sbjct: 181 PSLLEEGSSAVKRNIL---KQKPEHQTNTQSGCC 209

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-71
Identity = 140/194 (72.16%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+MEV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQK 196
           PSLLE GS  VK+K
Sbjct: 181 PSLLEEGSSSVKRK 192

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.8e-69
Identity = 132/213 (61.97%), Postives = 167/213 (78.40%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++CF+EL  K++E 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 215
           PSL   GS   K+ I  +  A +    +   CC
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-49
Identity = 100/180 (55.56%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKKLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GK+ KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGN 131
           TAGQERF TLTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSV 191
           KVD  + R V++EEG + A++H  LF+E SAR    V + F+EL  K+++ P LLE  +V
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.2e-47
Identity = 94/173 (54.34%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K + + G + KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDR 135
           ERF TLT SYYRGA G+ILVYDVT+R+TFT L N W  E+E Y T  + +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 127

Query: 136 GSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLEN 188
             +R V   EG++ A+KH  LF+E SA+TR+ V   F+EL  K+++ P L E+
Sbjct: 128 -DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWES 178

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.8e-117
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
           RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 216
           VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 204/215 (94.88%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
           RECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 216
           VPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL
Match: A0A5D3BLP5 (Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00050 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-106
Identity = 203/261 (77.78%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI------------- 61
           MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTI             
Sbjct: 1   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGEPLCVLRRSQLY 60

Query: 62  ----------------------------------GVDFKIKMVTVGGKKLKLTIWDTAGQ 121
                                             GVDFKIKMVTVGGK+LKLTIWDTAGQ
Sbjct: 61  LVMQVQGALKFAGEKQPSLTSRCSRVISISCIASGVDFKIKMVTVGGKRLKLTIWDTAGQ 120

Query: 122 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDR 181
           ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNKVDR
Sbjct: 121 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNKVDR 180

Query: 182 GSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQ 216
           GS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+VVKQ
Sbjct: 181 GSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIVVKQ 240

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.3e-103
Identity = 193/214 (90.19%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 215
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 212

[Close]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.5e-102
Identity = 192/214 (89.72%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 215
           VPSLLENGSVVVKQKILDKT+A K  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALK--EANDGGCC 212

[Close]

BLAST of CsaV3_2G021030 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-78
Identity = 149/214 (69.63%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           EC+++LVGNKVDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++CF+EL+ K+MEV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDR-GCC 215
           PSLLE GS  VK+ IL   + + E + N + GCC
Sbjct: 181 PSLLEEGSSAVKRNIL---KQKPEHQTNTQSGCC 209

[Close]

BLAST of CsaV3_2G021030 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 140/194 (72.16%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+MEV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQK 196
           PSLLE GS  VK+K
Sbjct: 181 PSLLEEGSSSVKRK 192

[Close]

BLAST of CsaV3_2G021030 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 140/194 (72.16%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+MEV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQK 196
           PSLLE GS  VK+K
Sbjct: 181 PSLLEEGSSSVKRK 192

[Close]

BLAST of CsaV3_2G021030 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 140/194 (72.16%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+MEV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQK 196
           PSLLE GS  VK+K
Sbjct: 181 PSLLEEGSSSVKRK 192

[Close]

BLAST of CsaV3_2G021030 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70
Identity = 132/213 (61.97%), Postives = 167/213 (78.40%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
           +CIK+LVGNKVD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++CF+EL  K++E 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 215
           PSL   GS   K+ I  +  A +    +   CC
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

The following BLAST results are available for this feature:

BLAST of CsaV3_2G021030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150373.1	7.8e-117	100.00	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]
XP_008456546.1	5.2e-113	94.88	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_038885704.1	1.7e-108	93.02	ras-related protein RABC2a-like [Benincasa hispida]	[more]
TYJ99964.1	8.1e-106	77.78	ras-related protein RABC2a-like [Cucumis melo var. makuwa]	[more]
XP_022952871.1	1.1e-102	90.19	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]

BLAST of CsaV3_2G021030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	1.6e-77	69.63	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.8e-71	72.16	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	2.8e-69	61.97	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	2.5e-49	55.56	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	5.2e-47	54.34	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of CsaV3_2G021030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN27	3.8e-117	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A1S3C3K9	2.5e-113	94.88	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A5D3BLP5	3.9e-106	77.78	Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1GLE8	5.3e-103	90.19	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A6J1JMZ9	4.5e-102	89.72	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]

BLAST of CsaV3_2G021030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	1.2e-78	69.63	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.3e-72	72.16	RAB GTPase homolog C2B	[more]
AT3G09910.2	1.3e-72	72.16	RAB GTPase homolog C2B	[more]
AT3G09910.3	1.3e-72	72.16	RAB GTPase homolog C2B	[more]
AT1G43890.1	2.0e-70	61.97	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 57..79 score: 50.88 coord: 39..55 score: 34.91 coord: 156..178 score: 34.38 coord: 17..38 score: 47.48 coord: 121..134 score: 42.24
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 14..181 e-value: 9.6E-26 score: 101.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 2..182 e-value: 0.0068 score: -2.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 17..181 e-value: 7.2E-88 score: 307.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 22..213 e-value: 4.7E-5 score: 22.8
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 3..214
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 3..214
None	No IPR available	PROSITE	PS51420	RHO	coord: 10..183 score: 9.481312
None	No IPR available	PROSITE	PS51419	RAB	coord: 12..214 score: 31.234674
None	No IPR available	CDD	cd01863	Rab18	coord: 17..177 e-value: 1.06557E-88 score: 256.469
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 19..181 e-value: 1.6E-12 score: 40.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 18..179 e-value: 2.7E-53 score: 179.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..215 score: 14.271277
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..174 e-value: 1.3E-28 score: 97.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..212 e-value: 1.8E-61 score: 209.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G021030.1	CsaV3_2G021030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding