CsaV3_2G018050 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G018050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zonadhesin
Location	chr2: 15051025 .. 15054352 (-)
RNA-Seq Expression	CsaV3_2G018050
Synteny	CsaV3_2G018050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCGCTGTAATTTCATTTCATTATTAAATAAGAAATAAAGAAATAAATATATATATAAAGAAATAAAGAAATAAAGAAATAAGACTTTGCCTCATCACTACCATTTCTCTTCTCTCTCTATCTCTCTATTTCGCCGTAGAAATATTGTCGGAACAGAACACTCAAAACAAATTCATTCTCTATAAATTCTTCAATTTCTCTCTATCTTTCTTCAATTCTTCTTCAATCCAATCACTACTCCTACTTCCCCAAATGGGTGCTTGTGCAACTAAGCCCAAGGCCGACGGTGCTCTCGCTCCGGCGCCGGAACCCGAGAAGAAGGATGTTGATGCTGCTGTTGCTGTTCTCGACGCTGTTGACCCTCAGAAAACAGTTGAAGTTAAGGCGGTGGAGGTTTCCGGAGAGGGGGACCAAAGCGATAAAGGTAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTTAAACGCCGCTCACTAAGCAACTTATTTAAGGAGGTATTATTTATTTTTCGAATCATCCTTCGATTTGGTTTCTATTTCTTTGGCGATTTTCGATTTCTCATCAGTTTTGAGTTGAAATCTAATGTTTGTTTGTTGAGTGTAAATTAATATTATTGTAAAGAGGAATTCGTCTTGATCTTTTTTTAATTTCGTTGTTTGTTGAATGAAGTGGAGGACTGTGATTGTTGATTTTGAAATTAGGGGATTCTGTCGTTGTCGCTGTTTGGTTCTCGAGAAATATAATTAGGGAAAATTTGTTAAGGAAAATGGCAGAGTTTATGTTATTGATACCTCGTGTTTCTGAATTTGGAATAAATTTCAATGAACTTGTGTCGTTTTGTGATAGCTTTTTTCATAATTTATTTTTAACCCTCCATGTTTATTCGCGAATCTCGGCGGTTTCTCGGGAAGCAAACAGATTTCTTTACTCTTTTCCACAACCAAACTTTTATCCTCTTTTGGAAGTAAAGAGAATTGAATAGTCCTCCCAAAGGTGAAAAAGCAAAGTAAAGAAATGCAATTATATGTTACAAAAGTGGCACAGTTCTTTATAAATTGTGACTTGTCTGCACCCTAAAATTTAGAGATTCAGAGAAAAAATTTCAACTTCTTTTCAATGGTCCCTTTTTCGATTCAACAACTCTGTTTGTTTTGATTGGACGTTTGTTTATCTAATATACAGTACTCAGGATTCATGAGGCTTGATAATTTTAAGTCCGAATCTTTTACACTTAAGATTATCAATACATGGAATCTTCCCATTCCACAACACCATTCGTTTGGTGACAAACAAAAGTGTCCTTTCCTTGAGGGGCCATCCTATTTTTCTCCTCTTTCTTCTGTTATTTTTGCTCATGTGTTGCCTCCATTCTCTGATTGTTTCACACCTCATTCAACTTTACATGTTTGGCTGCACCCTATAGAAGTTTCTTTCATTCCCATGTGATCTTGATGGGGAAAGGCTTGATACATTTTTCACCCGCACGTTCGGATATGATATGTCCCCTGGCCCCTAGCTAAACAGTCCTTCAAGCAGTAAAAACGCGGTCGCCTTTGAGTAAAATTTTGATTTGTAGTTTATGTTGATAGTTGTCCTTAATGATCAGGGTCATCAATGAACCCTCCATGGGCCTCTTTTTTTTTATTGTCTCTGCTTCCATGTAGTATCTTGGTTTGTATGTAGAATGTTTAGATGCCAAATAGGAAAGCCATGAGTTCCTATATCCAAAAGAAATTTCGTTAGTTTCTTTTTATCAATAGTTTGTTGGAGATGCGATGCATTGCCTTTGAAAATGACTGTTCATCAATATGATCTTGCATTGACAATTGGTGGGTGTCCAATTTGATTGTGTATATAAACGAGATGTGTATTTATATATAGTCAGCTAGCTTAGGTGTAGCTATGCTTCGAAGTTGTTGGTTTGAATTGGTTCCAATGTTCGGACACAAGGTTTGGTTTGATCAACTCAGAGCAATTTTGTATTGAAAAATATCATATATAACAGCTGAAAGTTTCTTTGCATATATTCTTAATCTTCCTTCATGATCCTCTTAAATTGTTCTAAATGTAAATTCTGAATCTTCTGCAGAAAGAAGGGAGTGAATCAATTGACGGTGAGAAGCCAATTGGGGAAACCGAGACAGAAATACAAACAAAAGAAATCGACATTAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTATTGAAGAGCCTGAGGCAAAAGTGCCTCAAACTGTAGTAGTAAAGGAAAAGCATATTGAAGAAGCGGACATTAAGGTACCTCAAACCATAGCAGAGACCGAAAAACATACTGAAGAATCTGAGACGAAGTTGCCTCAAACTGTAGTAGAAACTGAAAAACAAACCGAAGAAGTTGAGGTGGAGGTACCTATAACTGTAGTAGAAACCAAAGAAACTGAGACCAAGGCGCCTCATCCAGTCGTAGAGATTGAAAAATCTGAAATTCCAAATGAAAGGATAAAGGTCACAGATGTTACGACAACTTCCGAGACCATCACTGTGGAGAAAGTAATTGCACCTTCACCATCTGATGTTACACCAACGAGTGAAACATCCGAGGAAAAGAGATCAGAAGAAGTAAAAGTACCAGAGAAAGTCGAGAAAGCTGAAGTAGTGACATTAGTTGAAGCAACACCAGCACCAGATGAGAGTATTACGTCTGAGAAGAAGAAAGATGATAGCAGTGATGTGAAGAAGACTGAGACAGAGACACCGAAAGAAACCGAACCAAAGCCTGTTGCACCTACGGAAACCAGTGCCGAACCAGCAGAGGTAAAGAATGAAGTAGTGAAGGTAAGTGCTGAGGAAAAAATATCAAGTTGATGAAAAGTGAGACATTATTTGGGATTGGAAAGTATAGAAAGTGAAAAGGAGATGGTTTTTTTCTTGGGTTTTTATTATTTGGGAAGAAAGTTAAGTTTACCCAAAGAAACAATGGCTGGAATCTGCCATGATCAAGGTTTAGATTGTTATTATGTGGTTTATAAAGCAACTTCTTGAGAGGCTTTGTTTCTATTGTTTTATTTGTATATCATTTGTTGGTTTTTCATTGAGTTGCACATTCTATTTCCTTGTCTTTGCATGTAGAGACATATGAGTTTGCCAAATTAATATGAACATAGAATGCCCTTTTTTAAATTTAAATGTGATATTTACAATTCTTCTTTGGAATTTGCCTCATATTGTACTAAAACTTTCATATCAAAATTATAAAAGGTCCTACCGGGAGTCGAACCCAGGTCGTTGGATTCAAAGTCCAAAGTGCTAACCACTACACCATAGAACCCCT

mRNA sequence

ATGGGTGCTTGTGCAACTAAGCCCAAGGCCGACGGTGCTCTCGCTCCGGCGCCGGAACCCGAGAAGAAGGATGTTGATGCTGCTGTTGCTGTTCTCGACGCTGTTGACCCTCAGAAAACAGTTGAAGTTAAGGCGGTGGAGGTTTCCGGAGAGGGGGACCAAAGCGATAAAGGTAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTTAAACGCCGCTCACTAAGCAACTTATTTAAGGAGAAAGAAGGGAGTGAATCAATTGACGGTGAGAAGCCAATTGGGGAAACCGAGACAGAAATACAAACAAAAGAAATCGACATTAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTATTGAAGAGCCTGAGGCAAAAGTGCCTCAAACTGTAGTAGTAAAGGAAAAGCATATTGAAGAAGCGGACATTAAGGTACCTCAAACCATAGCAGAGACCGAAAAACATACTGAAGAATCTGAGACGAAGTTGCCTCAAACTGTAGTAGAAACTGAAAAACAAACCGAAGAAGTTGAGGTGGAGGTACCTATAACTGTAGTAGAAACCAAAGAAACTGAGACCAAGGCGCCTCATCCAGTCGTAGAGATTGAAAAATCTGAAATTCCAAATGAAAGGATAAAGGTCACAGATGTTACGACAACTTCCGAGACCATCACTGTGGAGAAAGTAATTGCACCTTCACCATCTGATGTTACACCAACGAGTGAAACATCCGAGGAAAAGAGATCAGAAGAAGTAAAAGTACCAGAGAAAGTCGAGAAAGCTGAAGTAGTGACATTAGTTGAAGCAACACCAGCACCAGATGAGAGTATTACGTCTGAGAAGAAGAAAGATGATAGCAGTGATGTGAAGAAGACTGAGACAGAGACACCGAAAGAAACCGAACCAAAGCCTGTTGCACCTACGGAAACCAGTGCCGAACCAGCAGAGGTAAAGAATGAAGTAGTGAAGGTAAGTGCTGAGGAAAAAATATCAAGTTGA

Coding sequence (CDS)

ATGGGTGCTTGTGCAACTAAGCCCAAGGCCGACGGTGCTCTCGCTCCGGCGCCGGAACCCGAGAAGAAGGATGTTGATGCTGCTGTTGCTGTTCTCGACGCTGTTGACCCTCAGAAAACAGTTGAAGTTAAGGCGGTGGAGGTTTCCGGAGAGGGGGACCAAAGCGATAAAGGTAAGGAAGTTGTTGATGTTGACGACGATAAGGTGGATGATCAGAGTGTTAAACGCCGCTCACTAAGCAACTTATTTAAGGAGAAAGAAGGGAGTGAATCAATTGACGGTGAGAAGCCAATTGGGGAAACCGAGACAGAAATACAAACAAAAGAAATCGACATTAAGGCACCTCAAACTGAAGTAGAAACCGAAAAGTGTATTGAAGAGCCTGAGGCAAAAGTGCCTCAAACTGTAGTAGTAAAGGAAAAGCATATTGAAGAAGCGGACATTAAGGTACCTCAAACCATAGCAGAGACCGAAAAACATACTGAAGAATCTGAGACGAAGTTGCCTCAAACTGTAGTAGAAACTGAAAAACAAACCGAAGAAGTTGAGGTGGAGGTACCTATAACTGTAGTAGAAACCAAAGAAACTGAGACCAAGGCGCCTCATCCAGTCGTAGAGATTGAAAAATCTGAAATTCCAAATGAAAGGATAAAGGTCACAGATGTTACGACAACTTCCGAGACCATCACTGTGGAGAAAGTAATTGCACCTTCACCATCTGATGTTACACCAACGAGTGAAACATCCGAGGAAAAGAGATCAGAAGAAGTAAAAGTACCAGAGAAAGTCGAGAAAGCTGAAGTAGTGACATTAGTTGAAGCAACACCAGCACCAGATGAGAGTATTACGTCTGAGAAGAAGAAAGATGATAGCAGTGATGTGAAGAAGACTGAGACAGAGACACCGAAAGAAACCGAACCAAAGCCTGTTGCACCTACGGAAACCAGTGCCGAACCAGCAGAGGTAAAGAATGAAGTAGTGAAGGTAAGTGCTGAGGAAAAAATATCAAGTTGA

Protein sequence

MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKEVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVETEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTEEVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS*

Homology

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BLAST of CsaV3_2G018050 vs. NCBI nr
Match: XP_004147382.1 (neurofilament medium polypeptide [Cucumis sativus] >KGN62131.1 hypothetical protein Csa_006087 [Cucumis sativus])

HSP 1 Score: 582.0 bits (1499), Expect = 3.3e-162
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE
Sbjct: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE
Sbjct: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS 240
           EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS
Sbjct: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS 240

Query: 241 DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE 300
           DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE
Sbjct: 241 DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE 300

Query: 301 TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS
Sbjct: 301 TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 337

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BLAST of CsaV3_2G018050 vs. NCBI nr
Match: XP_008460915.1 (PREDICTED: neurofilament medium polypeptide-like [Cucumis melo] >KAA0040783.1 neurofilament medium polypeptide-like [Cucumis melo var. makuwa] >TYK02099.1 neurofilament medium polypeptide-like [Cucumis melo var. makuwa])

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 278/338 (82.25%), Postives = 292/338 (86.39%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPKADGALAPAPEPEKKDVD   AV+DAV+P+KTVEV AVEVSGEGDQ DKGKE
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVD---AVVDAVEPEKTVEVPAVEVSGEGDQGDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKP+GETETEIQTKEIDIKAPQ    
Sbjct: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGETETEIQTKEIDIKAPQ---- 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEE E KVPQTVV  EKH EE + KVPQT+ ETEK TEE+       VV+ EKQTE
Sbjct: 121 TEKCIEESETKVPQTVVEAEKHTEEIETKVPQTVVETEKRTEEA-------VVQIEKQTE 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDV-TTTSETITVEKVIAPSP 240
           E EVEVP TVVETKETETKAPHPVVE EKSEIP ERI++TDV TTTSETITVEKVIAPSP
Sbjct: 181 EAEVEVPKTVVETKETETKAPHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
           SDVTPTSETSEEKRSE+VK+PEKVEKAEVVTLVE  P          KKDD SD KKTET
Sbjct: 241 SDVTPTSETSEEKRSEDVKLPEKVEKAEVVTLVEVEP----------KKDDISDAKKTET 300

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKPVAPTETSA+PAEVK+EVVKVSAEEK SS
Sbjct: 301 ETPKETEPKPVAPTETSAKPAEVKDEVVKVSAEEKTSS 314

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BLAST of CsaV3_2G018050 vs. NCBI nr
Match: XP_038902634.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 9.3e-109
Identity = 258/361 (71.47%), Postives = 287/361 (79.50%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAV-EVSGEGDQSDKGK 60
           MGACATKPKADG+LAPAPEPEKKDVDA V    AV+PQ  V+V AV EVSGEG+QSDKGK
Sbjct: 1   MGACATKPKADGSLAPAPEPEKKDVDAVV----AVEPQNKVDVPAVEEVSGEGNQSDKGK 60

Query: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGET------ETEIQTKEIDIK 120
           EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSES++ EKP GET      ETEI TKE++IK
Sbjct: 61  EVVDVDDDKVDDQSVKRRSLSNLFKEKEGSESLECEKPAGETETVESKETEIHTKEVEIK 120

Query: 121 APQTEVETEKCIEEPEAKV--------------PQTVVVKEKHIEEADIKVPQTIAETEK 180
           APQTEVE E C E  E KV              PQTVV  +K  EEA+ KVPQT+ ET++
Sbjct: 121 APQTEVEIETCTEAAETKVLQTVLVTEDADTKAPQTVVETKKDTEEAETKVPQTVVETKE 180

Query: 181 HTEESETKLPQTVVETEKQTEEVEVEVPITVVE----TKETETKAPHPVVEIEKSEIPNE 240
           HTEE+ETK P TVVE EK+TEEV+ E P  VVE    T+E ETK P  VVE EKSEIP E
Sbjct: 181 HTEEAETKAPVTVVEAEKRTEEVKTETPQIVVETEKHTEEDETKVPQTVVEAEKSEIPIE 240

Query: 241 RIKVTDVTTTSETITVEKVIAPSPSDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEAT 300
           RI++TDV TTSETI VEKVI PSPSDVTPTSETSEEKRSE+VK+PEKVEK +VVT+VEAT
Sbjct: 241 RIQITDVPTTSETIIVEKVIEPSPSDVTPTSETSEEKRSEDVKLPEKVEKTDVVTIVEAT 300

Query: 301 PAPDESITSEKKKDDSSDVKKTETETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKI 337
           PA DES TSE KK+D SDVKKTETETPKETEPKPV PTE+S +PA+  +EVVKV+AEEK 
Sbjct: 301 PAKDESNTSENKKEDISDVKKTETETPKETEPKPVGPTESSTKPAQENDEVVKVTAEEKT 357

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BLAST of CsaV3_2G018050 vs. NCBI nr
Match: XP_022971657.1 (brain acid soluble protein 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 1.5e-74
Identity = 194/338 (57.40%), Postives = 225/338 (66.57%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPK DG  APAPEPEKK  +  V  + AV+P+K VE+  VEVSGEG+QSDKGKE
Sbjct: 1   MGACATKPKVDGGKAPAPEPEKKVEEKDVDAVVAVEPEKNVEISVVEVSGEGNQSDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVD DD+K DDQ VK RSLSNLFKEKEG+ES + EKP GE           +KAPQTE+E
Sbjct: 61  VVDDDDNKADDQRVKTRSLSNLFKEKEGNESNECEKPAGE-----------MKAPQTELE 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEEP+ KVPQT+   EKH +EA+ KVPQT+ ETEKH +E+ETK+PQTVV  EK T+
Sbjct: 121 TEKCIEEPQTKVPQTIAETEKHTDEAETKVPQTVVETEKHIDEAETKVPQTVVAPEKHTD 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVT-TTSETITVEKVIAPSP 240
           +                        E+  SE  +ERI++ DV  TTSET+  EKVI PSP
Sbjct: 181 K-----------------------AELNASETESERIQIADVVPTTSETLPEEKVILPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
            D T                       EVVTLVEATPA DE+  SEKKK+D  DVKKTET
Sbjct: 241 PDET-----------------------EVVTLVEATPAADETKASEKKKEDIIDVKKTET 281

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKP APTETS E A+  +EVVKV  EEKI+S
Sbjct: 301 ETPKETEPKPAAPTETSTEAAQQNDEVVKVIGEEKITS 281

[Close]

BLAST of CsaV3_2G018050 vs. NCBI nr
Match: XP_023512385.1 (brain acid soluble protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 4.1e-72
Identity = 201/339 (59.29%), Postives = 224/339 (66.08%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPK D   APAPEPE KDVDA V    AV P+K VEV  VEVSGEG+QSDKGKE
Sbjct: 1   MGACATKPKVDAGKAPAPEPENKDVDAVV----AVQPEKNVEVPVVEVSGEGNQSDKGKE 60

Query: 61  -VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEV 120
            VVD DD+K DDQ VK RSLSNLFKEKEGSES + EK  GE           IKAPQ   
Sbjct: 61  VVVDDDDNKADDQRVKTRSLSNLFKEKEGSESNECEKTAGE-----------IKAPQ--- 120

Query: 121 ETEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQT 180
            TEKCIEEP+ KVPQT+V  EKH EEA+ KVPQT+ ETEKH +E+ETK+PQTVVE EK T
Sbjct: 121 -TEKCIEEPQTKVPQTIVETEKHTEEAETKVPQTVVETEKHIDEAETKVPQTVVEPEKHT 180

Query: 181 EEVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVT-TTSETITVEKVIAPS 240
           ++VE   P       ETE                +ERI++ DV  TTSET+  EKVI PS
Sbjct: 181 DKVEPNAP-------ETE----------------SERIQIADVVPTTSETLPEEKVILPS 240

Query: 241 PSDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTE 300
           P D T                       EVVTLVEATPA DE+  SEKKK+D  DV+KTE
Sbjct: 241 PPDET-----------------------EVVTLVEATPAADETKASEKKKEDIIDVEKTE 274

Query: 301 TETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           TETPKETEPKP APTETS EPA+  +EVVKV  EEKI+S
Sbjct: 301 TETPKETEPKPAAPTETSTEPAQQNDEVVKVIGEEKITS 274

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BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL
Match: A0A0A0LQ67 (Zonadhesin OS=Cucumis sativus OX=3659 GN=Csa_2G301490 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.6e-162
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE
Sbjct: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE
Sbjct: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS 240
           EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS
Sbjct: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVTTTSETITVEKVIAPSPS 240

Query: 241 DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE 300
           DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE
Sbjct: 241 DVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTETE 300

Query: 301 TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS
Sbjct: 301 TPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 337

[Close]

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL
Match: A0A5A7TCF0 (Neurofilament medium polypeptide-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00860 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.5e-123
Identity = 278/338 (82.25%), Postives = 292/338 (86.39%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPKADGALAPAPEPEKKDVD   AV+DAV+P+KTVEV AVEVSGEGDQ DKGKE
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVD---AVVDAVEPEKTVEVPAVEVSGEGDQGDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKP+GETETEIQTKEIDIKAPQ    
Sbjct: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGETETEIQTKEIDIKAPQ---- 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEE E KVPQTVV  EKH EE + KVPQT+ ETEK TEE+       VV+ EKQTE
Sbjct: 121 TEKCIEESETKVPQTVVEAEKHTEEIETKVPQTVVETEKRTEEA-------VVQIEKQTE 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDV-TTTSETITVEKVIAPSP 240
           E EVEVP TVVETKETETKAPHPVVE EKSEIP ERI++TDV TTTSETITVEKVIAPSP
Sbjct: 181 EAEVEVPKTVVETKETETKAPHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
           SDVTPTSETSEEKRSE+VK+PEKVEKAEVVTLVE  P          KKDD SD KKTET
Sbjct: 241 SDVTPTSETSEEKRSEDVKLPEKVEKAEVVTLVEVEP----------KKDDISDAKKTET 300

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKPVAPTETSA+PAEVK+EVVKVSAEEK SS
Sbjct: 301 ETPKETEPKPVAPTETSAKPAEVKDEVVKVSAEEKTSS 314

[Close]

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL
Match: A0A1S3CDJ8 (neurofilament medium polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103499656 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.5e-123
Identity = 278/338 (82.25%), Postives = 292/338 (86.39%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPKADGALAPAPEPEKKDVD   AV+DAV+P+KTVEV AVEVSGEGDQ DKGKE
Sbjct: 1   MGACATKPKADGALAPAPEPEKKDVD---AVVDAVEPEKTVEVPAVEVSGEGDQGDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKP+GETETEIQTKEIDIKAPQ    
Sbjct: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPVGETETEIQTKEIDIKAPQ---- 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEE E KVPQTVV  EKH EE + KVPQT+ ETEK TEE+       VV+ EKQTE
Sbjct: 121 TEKCIEESETKVPQTVVEAEKHTEEIETKVPQTVVETEKRTEEA-------VVQIEKQTE 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDV-TTTSETITVEKVIAPSP 240
           E EVEVP TVVETKETETKAPHPVVE EKSEIP ERI++TDV TTTSETITVEKVIAPSP
Sbjct: 181 EAEVEVPKTVVETKETETKAPHPVVETEKSEIPIERIQITDVPTTTSETITVEKVIAPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
           SDVTPTSETSEEKRSE+VK+PEKVEKAEVVTLVE  P          KKDD SD KKTET
Sbjct: 241 SDVTPTSETSEEKRSEDVKLPEKVEKAEVVTLVEVEP----------KKDDISDAKKTET 300

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKPVAPTETSA+PAEVK+EVVKVSAEEK SS
Sbjct: 301 ETPKETEPKPVAPTETSAKPAEVKDEVVKVSAEEKTSS 314

[Close]

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL
Match: A0A6J1I2K4 (brain acid soluble protein 1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470338 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 7.3e-75
Identity = 194/338 (57.40%), Postives = 225/338 (66.57%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPK DG  APAPEPEKK  +  V  + AV+P+K VE+  VEVSGEG+QSDKGKE
Sbjct: 1   MGACATKPKVDGGKAPAPEPEKKVEEKDVDAVVAVEPEKNVEISVVEVSGEGNQSDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVD DD+K DDQ VK RSLSNLFKEKEG+ES + EKP GE           +KAPQTE+E
Sbjct: 61  VVDDDDNKADDQRVKTRSLSNLFKEKEGNESNECEKPAGE-----------MKAPQTELE 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEEP+ KVPQT+   EKH +EA+ KVPQT+ ETEKH +E+ETK+PQTVV  EK T+
Sbjct: 121 TEKCIEEPQTKVPQTIAETEKHTDEAETKVPQTVVETEKHIDEAETKVPQTVVAPEKHTD 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVT-TTSETITVEKVIAPSP 240
           +                        E+  SE  +ERI++ DV  TTSET+  EKVI PSP
Sbjct: 181 K-----------------------AELNASETESERIQIADVVPTTSETLPEEKVILPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
            D T                       EVVTLVEATPA DE+  SEKKK+D  DVKKTET
Sbjct: 241 PDET-----------------------EVVTLVEATPAADETKASEKKKEDIIDVKKTET 281

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKP APTETS E A+  +EVVKV  EEKI+S
Sbjct: 301 ETPKETEPKPAAPTETSTEAAQQNDEVVKVIGEEKITS 281

[Close]

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL
Match: A0A6J1I7I5 (brain acid soluble protein 1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470338 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.6e-68
Identity = 184/338 (54.44%), Postives = 212/338 (62.72%), Query Frame = 0


Query: 1   MGACATKPKADGALAPAPEPEKKDVDAAVAVLDAVDPQKTVEVKAVEVSGEGDQSDKGKE 60
           MGACATKPK DG  APAPEPEKK  +  V  + AV+P+K VE+  VEVSGEG+QSDKGKE
Sbjct: 1   MGACATKPKVDGGKAPAPEPEKKVEEKDVDAVVAVEPEKNVEISVVEVSGEGNQSDKGKE 60

Query: 61  VVDVDDDKVDDQSVKRRSLSNLFKEKEGSESIDGEKPIGETETEIQTKEIDIKAPQTEVE 120
           VVD DD+K DDQ VK RSLSNLFKEKEG+ES + EKP GE           +KAPQTE+E
Sbjct: 61  VVDDDDNKADDQRVKTRSLSNLFKEKEGNESNECEKPAGE-----------MKAPQTELE 120

Query: 121 TEKCIEEPEAKVPQTVVVKEKHIEEADIKVPQTIAETEKHTEESETKLPQTVVETEKQTE 180
           TEKCIEEP+ KVPQTVV  EKHI+EA+ KVPQT+   EKHT+++                
Sbjct: 121 TEKCIEEPQTKVPQTVVETEKHIDEAETKVPQTVVAPEKHTDKA---------------- 180

Query: 181 EVEVEVPITVVETKETETKAPHPVVEIEKSEIPNERIKVTDVT-TTSETITVEKVIAPSP 240
                                    E+  SE  +ERI++ DV  TTSET+  EKVI PSP
Sbjct: 181 -------------------------ELNASETESERIQIADVVPTTSETLPEEKVILPSP 240

Query: 241 SDVTPTSETSEEKRSEEVKVPEKVEKAEVVTLVEATPAPDESITSEKKKDDSSDVKKTET 300
            D T                       EVVTLVEATPA DE+  SEKKK+D  DVKKTET
Sbjct: 241 PDET-----------------------EVVTLVEATPAADETKASEKKKEDIIDVKKTET 263

Query: 301 ETPKETEPKPVAPTETSAEPAEVKNEVVKVSAEEKISS 338
           ETPKETEPKP APTETS E A+  +EVVKV  EEKI+S
Sbjct: 301 ETPKETEPKPAAPTETSTEAAQQNDEVVKVIGEEKITS 263

The following BLAST results are available for this feature:

BLAST of CsaV3_2G018050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147382.1	3.3e-162	100.00	neurofilament medium polypeptide [Cucumis sativus] >KGN62131.1 hypothetical prot...	[more]
XP_008460915.1	1.1e-122	82.25	PREDICTED: neurofilament medium polypeptide-like [Cucumis melo] >KAA0040783.1 ne...	[more]
XP_038902634.1	9.3e-109	71.47	probable serine/threonine-protein kinase kinX [Benincasa hispida]	[more]
XP_022971657.1	1.5e-74	57.40	brain acid soluble protein 1 homolog isoform X1 [Cucurbita maxima]	[more]
XP_023512385.1	4.1e-72	59.29	brain acid soluble protein 1 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G018050 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ67	1.6e-162	100.00	Zonadhesin OS=Cucumis sativus OX=3659 GN=Csa_2G301490 PE=4 SV=1	[more]
A0A5A7TCF0	5.5e-123	82.25	Neurofilament medium polypeptide-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CDJ8	5.5e-123	82.25	neurofilament medium polypeptide-like OS=Cucumis melo OX=3656 GN=LOC103499656 PE...	[more]
A0A6J1I2K4	7.3e-75	57.40	brain acid soluble protein 1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I7I5	6.6e-68	54.44	brain acid soluble protein 1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsaV3_2G018050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G018050.1	CsaV3_2G018050.1	mRNA