CsaV3_2G017770 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAAAATTCTCTCTCAAATTTTAGCTTTTTAATATTGCAAAAAATTATGGTTCTTAAGAAGACATTAGCATTTTCATGCAATAATCTTCTCCAGCTATTGGCCTTCATCTTTCTCTTTTTTCTTCTCATCACAACCACAGGTATTGCTTGTTTATTTCGCTCTCCAATTATTTTTTAGGAATTGAACAGTAACTTATTGTTATTGCTTGTTGTACGTTTTAGGTTCTTCAGCAAGGAGTTTAGTAGAAGGGAGGAGTCGAAATGACGACGATCCTTACGTCAAAAACCATAGCGGAGTGATTGGAAACGACTTGGTGACAATGGATTATACTCCGGCGAGGAAGAACCATCCAATTCATAACTAGCAAAAATTACTAATAACTATTGGTAATAATGTTTTTAGAGTATGTTTGTTTGGAATTTGAATCGGAAGAAATTATATATGTTTTCTTCTTTGTATTTTCCTTTATTCATAGAGAAAGTTAAAGTAAAAACCTAAGCTTGAATGCTAAACATTATCTATCTATATATGATATGAAATGATATTTTCTACCGTT ATGGTTCTTAAGAAGACATTAGCATTTTCATGCAATAATCTTCTCCAGCTATTGGCCTTCATCTTTCTCTTTTTTCTTCTCATCACAACCACAGGTTCTTCAGCAAGGAGTTTAGTAGAAGGGAGGAGTCGAAATGACGACGATCCTTACGTCAAAAACCATAGCGGAGTGATTGGAAACGACTTGGTGACAATGGATTATACTCCGGCGAGGAAGAACCATCCAATTCATAACTAG ATGGTTCTTAAGAAGACATTAGCATTTTCATGCAATAATCTTCTCCAGCTATTGGCCTTCATCTTTCTCTTTTTTCTTCTCATCACAACCACAGGTTCTTCAGCAAGGAGTTTAGTAGAAGGGAGGAGTCGAAATGACGACGATCCTTACGTCAAAAACCATAGCGGAGTGATTGGAAACGACTTGGTGACAATGGATTATACTCCGGCGAGGAAGAACCATCCAATTCATAACTAG MVLKKTLAFSCNNLLQLLAFIFLFFLLITTTGSSARSLVEGRSRNDDDPYVKNHSGVIGNDLVTMDYTPARKNHPIHN* Homology
BLAST of CsaV3_2G017770 vs. NCBI nr
Match: KGN62099.1 (hypothetical protein Csa_006414 [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 7.9e-35 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. NCBI nr
Match: KAG6571378.1 (hypothetical protein SDJN03_30293, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. NCBI nr
Match: KAG6605285.1 (hypothetical protein SDJN03_02602, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.4 bits (163), Expect = 6.3e-08 Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. NCBI nr
Match: KAG6605284.1 (hypothetical protein SDJN03_02601, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. NCBI nr
Match: QHO02460.1 (Root meristem growth factor [Arachis hypogaea]) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. ExPASy TrEMBL
Match: A0A0A0LM46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297230 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017770 vs. ExPASy TrEMBL
Match: A0A444ZXP2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g063575 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.2e-05 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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