
CsaV3_2G017120 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTAATGGGCGGTTGGGAATAAATCAAAGCAATTAAATATGTAATTAAGTCTAAAACCATATCCTCACACATAGTGTTTGACAATTTTTAGAAGAAACTAGAAAAGAAAAAGAAGGGAATACTTGAGCATTGGAAAATCGACGATATTCCCAAAGCTTTTTTCCTTTGTTAAATTGCTTTTGAAAGTTGATTAGCCTTTAGAACACAAAAAGAAGAGAGAGAGAGAGATGTGTATGCTAGTGGTTTGTAAGGATTGCAGCAAATATACATGGAAGGGGTGTGGCCGCCACCTTCCTGGTCTCTACAAGAGCGTAGAGAAGGGGAAGCACTGCAACTGCCACCCTTGGCCGGGTGTCGTCGTGCCACCGGAAGATGTCCCCGACACGACGAAGCCATCGCAACCAGTGCAACCATCATCTGTCTCTACAGGTATGCTGCTATATGAACTAAACTTGTTCGAATAACATGATCTTTTTTGGAATGAAATCTGGGGTTTAGAAACATTTGCATAATTTGTTTTTGGAGTTCTTCTTTTCTTCTTGCTTGTTGTTCTTTGAGATTAATTGGATATATAGATGAGGGATTTGAGGAAGGATTGTTAACAAAGTTTGAGGATTTGATAAAATTGGTTATTATGTGGAGACGATATCTTGAGATCTCAAATACAATGTTTAACAATTCAAATGTTTATTTAAACAAAAATGGAAACCATGAATTAAAAATGGTGAGAAAAACAAATTAAATTATCATCTGCACAAAATCTATGAATTTAAAAACTAATTGTTCACAAAATAAATTTAATTCTCCTCGTGGTAATAAGTTTGATTAATTTTGTTAGATTTGTAACTAATGTTTTATTATTTCTTTAAAGAATGATACAAACAAATATATATATATATATATATATATATGTATATAATTCTGATGAATAGTTGCTATCATTTAAAACTGTTTAGAGAGATTTGATGATGGAAGAGACGGATAGTAAAGTTGTAAAAATATATGAATTTTCGTAGGCAGTGAAAGTTGGAGTTGATTTGTGCAGGTAAGACAGTTAAGTAGGACACTATGGGAGTAAGCCAAACTACAACTATTACTACCTCTCTTCACTTGTCAAGGTTGTCACTTCAAATATTTCATATACTATTATTATTCCATAAATAACGAAGGGCTTTGTAAAGGATGCAATCGTGTCCAATTCTAAATCAATCAAAAAAAAAAAAAAAAACTTTGAGTCATGTGTGTTCTAATTGTTTAAACTTCTCTCTCCCTCTCTCTCTATATATATATATATGAATGCAATGCATATCAATACTTAGCAATAACATAATATAAGATTAATTAGACATTATTTGGGTGTTGAATTCACTCACTAAGGACTTGGAAGACGGAAAATGGTGACGAGGAAATGAACTTTAGGGGTTTTGTTCATTAATTCAAACACACAAATATCCCCTTCTTCCAATTCATTATCAACCGCGAATCTCTTCCAACCGCCTTTCAGCTCCGTTCGCCGCCGTGTGAACGCCCACCGGACTCCGCACCATACTTTCCAAATCCGACCATCTCCCACCTCCAGCTTCACATCCACCGATTCCTTTATATATCTCTCTGAAAAGATCCTTGGCAAGCTCTGCAGATTAATTAATCACACATTCATCAACGATGACTATTCTCAAATCACCCATCCATCCATTCAAGTCTTGTTGTTGTTCTGTTCTGTTCTTACCAGACAATTTCCTGTTTGGATGTACGAAGGCCTCATTGTAACCATGAATGAAGGGTTCTTCGTTCTACATTTGAACGAACTCGCTCTCCTCACAACTACCAATTGATTCTCTGTTAATACCTGCTGCGTCTTCCGTGGATTCATCGGTCTCATCGATTCCGGACTGGATCTGCCGTCTTCTCTCTCGTTGTACTCTGAAATCGGTAAGTGTTCATCAGACTATAGTACTGATTGCTGAAATTCAAATGAAAGTTTAGAGAAATTAAGTGGAAAAATTAACCTGATGCTCTGTAATTAGTTTGTCTCGGTGAGTAGTCCGTTTCCAGATCTTCATCTTCATCGTCATCGCTGAATCCTTGAGGTGTAGTGAACTCTCGACGCTTCATTATCTTAATCTTCATATTCTTCTTCATCTCCCGCAAGGAGTAATACGCGGATGTTTCTTTCTCTTTCTTCTCCATTCTTCTTCTCTTCTTCAAAACCTCCTCATGTAGTATCTGGATAGATTCACCTTCATCATCGCTTTCGCTTTTAGGAACGATTACCGGCAGTCGACGCATTGGATAATCGATTTCGGTAGCGGAAGTATCGAAAATAAGAACATTGAAACAACAAATTCCTTTCAACTGGAACACGAGGAAATATCCAGGTTGAACGGCATAAAAGTTTACAAACTCCGGCCATCCTCTGAGGAAACATATTTTGCCGTCTAGTCTCGTGAGTTGGAAGTTCCATTTAGAGCCGTCGGGAAGGGAAAGAGTGGCGTTGTTGAATAACAGAGAATGGGCATTGTTCTTGACGAACTTGTTTGGAAGATCCTGTTGAAGAAGAAGAAAAAAAAAAAGAGTAATTAGAGAATGTGATTTGAAAAATTTGTTGGTTTGATTAGTACTTACAAGTTTTTGTTGGGTGAGATTTTGATGAAGAACGATCTTGAAGAAATGGGGATTTGGAGAAGTGAACAAACCCATTTACAAATATATTTCTTGAGCTCTTTCTCTCCAATGGGTTTGAATTTAAATACAAAATCAATGAACTTTCAAAACTTTTTAGAAAAAAACTCATGCAAATGTGTTAACAATGATAGTGTGTTGAAGAAAGACTCATAAGGAAAGTATGTGGCCAAATTCATCCAAGGCAGATGAATTTTTCAAATTCATAATATTCTGATAATTATTAAATAAGTTTGCATAACGTTATGATTATTTCCCATATGTTCTTTAGTTTGTTATAAACATGACAAACAAGCAAAATAGTATAAGAATGGTGAAATGAAAGGGGAGTAGAGTTATTATTCCAAGTCTTGTGTATTCTCTCCATTGTTCTTTTCTTCTTCCATAGTTTTCACAATCACATCACCATGTTCATCTCTTAAATGGATCCTTTGGAACCATTCTCTTTCAATAATAATATTGAAAACTA ATGTGTATGCTAGTGGTTTGTAAGGATTGCAGCAAATATACATGGAAGGGGTGTGGCCGCCACCTTCCTGGTCTCTACAAGAGCGTAGAGAAGGGGAAGCACTGCAACTGCCACCCTTGGCCGGGTGTCGTCGTGCCACCGGAAGATGTCCCCGACACGACGAAGCCATCGCAACCAGTGCAACCATCATCTGTCTCTACAGGTAAGACAGTTAAGTAG ATGTGTATGCTAGTGGTTTGTAAGGATTGCAGCAAATATACATGGAAGGGGTGTGGCCGCCACCTTCCTGGTCTCTACAAGAGCGTAGAGAAGGGGAAGCACTGCAACTGCCACCCTTGGCCGGGTGTCGTCGTGCCACCGGAAGATGTCCCCGACACGACGAAGCCATCGCAACCAGTGCAACCATCATCTGTCTCTACAGGTAAGACAGTTAAGTAG MCMLVVCKDCSKYTWKGCGRHLPGLYKSVEKGKHCNCHPWPGVVVPPEDVPDTTKPSQPVQPSSVSTGKTVK* Homology
BLAST of CsaV3_2G017120 vs. NCBI nr
Match: KGN62035.1 (hypothetical protein Csa_006238 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 7.8e-37 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. NCBI nr
Match: KAA0045848.1 (hypothetical protein E6C27_scaffold243G003810 [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 5.8e-24 Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. NCBI nr
Match: KAG7035219.1 (hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 92.4 bits (228), Expect = 1.7e-15 Identity = 44/74 (59.46%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. NCBI nr
Match: KAG6605256.1 (hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.4 bits (228), Expect = 1.7e-15 Identity = 44/74 (59.46%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. NCBI nr
Match: KAF7809773.1 (Phototropic-responsive NPH3 family protein isoform 1 [Senna tora]) HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14 Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. ExPASy TrEMBL
Match: A0A0A0LJK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287170 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. ExPASy TrEMBL
Match: A0A5A7TSL2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003810 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-24 Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. ExPASy TrEMBL
Match: A0A2C9UV86 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G097400 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.9e-14 Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. ExPASy TrEMBL
Match: A0A0L9UR73 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g038300 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.0e-13 Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of CsaV3_2G017120 vs. ExPASy TrEMBL
Match: A0A3N7EY41 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G130750 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.0e-13 Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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