CsaV3_2G016400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G016400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	chr2: 13670076 .. 13673667 (-)
RNA-Seq Expression	CsaV3_2G016400
Synteny	CsaV3_2G016400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTGAATTTATTTATATTATTTATTGTTTTAAAAAAAAAATTCTTTAAACCCTAATCTCTGTCTCTCTTTCTCCATGGGCGTGAGGTAGCCGTCAAGCCCTGTTTGTTTTCTTTCTTTCATCCGACCATCTCCGGCTTCCCTTCCGGCGAAGAAAATCCACGGCGCTCCCCCCTCGATTGAAGAACAAGTGCCCATCGAAAATCTCCCTTTCGGCGACGCGTTTAGTCCTCTGCTGGTTCGGCGACTACTGACGGAATCATTTCGACAACATTGAGTTTTGCACACTTTTCCGATTACCCATTTGAAACCAGACTCCGAACCATTCAGATTTCGTGTCTTGCGCAATTTCAACGTTTTAAGCTACGTTTTCCTCTTTCGGTGAGTTTCCGCTTTAACCCAATCCCCTTTTACCCCTGTTTTGGTGAGTTTTAATTATTAAAGTTCTGTTTAGGCCCTTTCAAACATAGCTGAATTGATTTAGATTGGTTTCTAATCCTTTGAAGCTCTTATTAGTTGATTCGGATTGGCTTCGAACTCTTTCGAACATTTCTTCAGTGAAGTGTCAAGTAGATTTTGTTAAGATTTAGGTGATAATCTCTATGTGGAAGACTCTTTTGTAGTTTGGGGCTAATTTGGAGTGTTCGAGCTAAGTTGTAAGGCCATTTTGGAGAGATACTTGGGGATTGTTTTAGGAATACAATAGGTAAGTGATATTCTACGTGAAGAGTTTGTTTTTCTGTGTGCTGGTGTGCTATGTGGTTAGCTATACTATATTTCATGTGCTTATCGATATATGAGAGCATGTTCTGGTGTTGCGTTCACATTATAAAAAGTTGCATGTTGAGGAATTATTAAGTGGCCTTGGTTATGAATGTGACGCTTGTTGAGAATGTCTAGCTATGCATATGGTTTATGTTGAGAGTTTTTGTTTTATCATTTTGGCACAGAACATGGTTTAGTGTAATGTTGTAGAACTCATCCATCCGGTGCGGTTTAGAACGTTGTGAGTGTTAAAGGGAAAGTAAGGTGAAAAAGGGAAGAGTTTTTCTCTTATAACAAAAAATAATTTCAAAACTATAGTGTATTTTATAGTGTAATTTTAGCAAGGGTGGAATATACTTTTAGCCACTGAGATTTGAACTTGATGTCTATTTGGTCCCTCAAGTTTTAAAATGAATATTTTAGTCTATGAGATTTGATAAATGAATGGTCTCTAATCTACATTGATTGTTAATTAACTAACTATGGAATGAGGTGGGAGTTTTAAATTAGTGACTTAAAATGCTAATTTGCACTCTTGTACATTGTAGGAGAAGTTTCTCTATGTCTAATCCTTACATATAGTTTAAAGATATTTTTCAATTCTTCATTAAGAGTAACTGTTCAATTAAATGGTAATGAAGAAGTCACTGTGTTATATGAATATGGAATATTTTTCTTTCATATTGTAAAGTTCAACTACTAATTTCAGTAGTTAAGACAAAAGACACAATTTATTGGAAGGAATAAATTTAATTTATGGGTTGTGAGATTTTTAACTTCCAATGCATTTTTGGTTAACTTAGTATGATTGGTTTTACAGGAGCTGATTGGAAAAATGAGTTTAATATCACAAAATGTTGCTGTAGTTAGTAGTATTGAGAAGGTTATGGAGGAGAATACTCTTAGCCCGTCATCTCCGCCGAGAAACGCAGATGCTAGTGATGTAGACAAATCTGGTTTAGATACTTCTAGAGCAAAAAAGAGGAAGAAAGAACACAAAATAGAAGATAAGCAACTAGTAAAAGAACAAAAGGAAATGATGAAGCTTGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGCAAAATGGTTTCAATTCTGAAGAGAAAACTCCTGCTTTATACATAATGGACCGGTCTGCAGATCATTCCCTTTCTGCATATGAAGATGATTATGGGCTCCTAGATGAGAGTACGAATAAGGAGGAACACCAGCAAAGAAAACCAGTATGGGTTGACGAGGAAGAGGAGAAGGCCACAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAACATGAGAATTCGATTTCTGGCTCAGAGTATGTGTCAAGATTGAGAGCTCAGCATGCCAAGATAAACCCAGGCACTGAATGGGCTCAACTTGATGCACAATCTAGGGGTGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGGTGGTTATGATAATGTTGATTCTATTGATGATATCCTTCGAACAAGTGAGAAACTTGTTGTGAAGAGTGGTGGAAAATTAATGCCAGGTCTCCTTGGATATTCAAGACTTGTAGATGCTAATGCTGAGGAGCCATCTAATGGGCCTATCAATTCGGTTCAATTTCATCGCAACTCTCAGTTACTTCTAGCCACTGGGTTGGATCGAAAGCTTAGATTCTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCCCAGGTTATCATAGCTGGAAGAAGAAAGTTCTTTTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAGATTGGCCCTCTTGTCGGTAGAGAGGAGAAAAGCCTTGAAGCTTTTGAAATTTCTCCCGATTCCAGCACAATCGCATTTATGGGCAATGAAGGCTATATCTTGTTAGTGTCAACAAAAACAAAGGAGCTCATTGGGACACTTAAGATGAATGGAACTGTTCGTTCTTTGGCATTTGCTGATGATGGGCGACAGCTACTGAGCTCTGGGGGTGATGGGCAAATCTATCACTGGGATTTGAGAACAAGAACATGCATTCACAAGGCTGTCGACGAAGGTTGCATTAATGGTACTGCACTATGTACCTCCCCAAATGGATTGTTTGCTGCTGGTTCTAACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGGAAGAAGAAGCCATTGAAAGCCATTGAAAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTAGCCATCTGTTCAAGAATGAAGCAAAGTAGTCTGAAGTTGATACACATTCCTTCTTTTACTATTTTTTCAAACTGGCCACCGCCGAAGAAGAATCTTCAATACCCTTCATGTCTGGACTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTATATAAACTACATCATTATCATCATGCTTAGATTTGATCTCCACATGCTTAGTCATTCGCTGGAACAGTTTTGACACTTAAATTGGTTATTACAATCAGCTGTTGCTTTAGACAAGTTTACAGATCACATGTTGTTTACTACTTTTCTACTTTCTTTTGTTGTTAAGATTAAAACTCAATGTTTCATAATTTGTTATGAAGTAGTTTCCTCTTAACAGTTGTTATTAGTCTCTCATTATAGAGAATTGTTTTATTCTTGAATTAGTTTTTCTGTTGATTATTTTACTTTTTATCCCATCTGAAAAATAATTGAAATTTATCTAAGGAAC

mRNA sequence

ATGAGTTTAATATCACAAAATGTTGCTGTAGTTAGTAGTATTGAGAAGGTTATGGAGGAGAATACTCTTAGCCCGTCATCTCCGCCGAGAAACGCAGATGCTAGTGATGTAGACAAATCTGGTTTAGATACTTCTAGAGCAAAAAAGAGGAAGAAAGAACACAAAATAGAAGATAAGCAACTAGTAAAAGAACAAAAGGAAATGATGAAGCTTGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGCAAAATGGTTTCAATTCTGAAGAGAAAACTCCTGCTTTATACATAATGGACCGGTCTGCAGATCATTCCCTTTCTGCATATGAAGATGATTATGGGCTCCTAGATGAGAGTACGAATAAGGAGGAACACCAGCAAAGAAAACCAGTATGGGTTGACGAGGAAGAGGAGAAGGCCACAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAACATGAGAATTCGATTTCTGGCTCAGAGTATGTGTCAAGATTGAGAGCTCAGCATGCCAAGATAAACCCAGGCACTGAATGGGCTCAACTTGATGCACAATCTAGGGGTGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGGTGGTTATGATAATGTTGATTCTATTGATGATATCCTTCGAACAAGTGAGAAACTTGTTGTGAAGAGTGGTGGAAAATTAATGCCAGGTCTCCTTGGATATTCAAGACTTGTAGATGCTAATGCTGAGGAGCCATCTAATGGGCCTATCAATTCGGTTCAATTTCATCGCAACTCTCAGTTACTTCTAGCCACTGGGTTGGATCGAAAGCTTAGATTCTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCCCAGGTTATCATAGCTGGAAGAAGAAAGTTCTTTTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAGATTGGCCCTCTTGTCGGTAGAGAGGAGAAAAGCCTTGAAGCTTTTGAAATTTCTCCCGATTCCAGCACAATCGCATTTATGGGCAATGAAGGCTATATCTTGTTAGTGTCAACAAAAACAAAGGAGCTCATTGGGACACTTAAGATGAATGGAACTGTTCGTTCTTTGGCATTTGCTGATGATGGGCGACAGCTACTGAGCTCTGGGGGTGATGGGCAAATCTATCACTGGGATTTGAGAACAAGAACATGCATTCACAAGGCTGTCGACGAAGGTTGCATTAATGGTACTGCACTATGTACCTCCCCAAATGGATTGTTTGCTGCTGGTTCTAACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGGAAGAAGAAGCCATTGAAAGCCATTGAAAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTAGCCATCTGTTCAAGAATGAAGCAAAGTAGTCTGAAGTTGATACACATTCCTTCTTTTACTATTTTTTCAAACTGGCCACCGCCGAAGAAGAATCTTCAATACCCTTCATGTCTGGACTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTATATAAACTACATCATTATCATCATGCTTAG

Coding sequence (CDS)

ATGAGTTTAATATCACAAAATGTTGCTGTAGTTAGTAGTATTGAGAAGGTTATGGAGGAGAATACTCTTAGCCCGTCATCTCCGCCGAGAAACGCAGATGCTAGTGATGTAGACAAATCTGGTTTAGATACTTCTAGAGCAAAAAAGAGGAAGAAAGAACACAAAATAGAAGATAAGCAACTAGTAAAAGAACAAAAGGAAATGATGAAGCTTGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGCAAAATGGTTTCAATTCTGAAGAGAAAACTCCTGCTTTATACATAATGGACCGGTCTGCAGATCATTCCCTTTCTGCATATGAAGATGATTATGGGCTCCTAGATGAGAGTACGAATAAGGAGGAACACCAGCAAAGAAAACCAGTATGGGTTGACGAGGAAGAGGAGAAGGCCACAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAACATGAGAATTCGATTTCTGGCTCAGAGTATGTGTCAAGATTGAGAGCTCAGCATGCCAAGATAAACCCAGGCACTGAATGGGCTCAACTTGATGCACAATCTAGGGGTGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGGTGGTTATGATAATGTTGATTCTATTGATGATATCCTTCGAACAAGTGAGAAACTTGTTGTGAAGAGTGGTGGAAAATTAATGCCAGGTCTCCTTGGATATTCAAGACTTGTAGATGCTAATGCTGAGGAGCCATCTAATGGGCCTATCAATTCGGTTCAATTTCATCGCAACTCTCAGTTACTTCTAGCCACTGGGTTGGATCGAAAGCTTAGATTCTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCCCAGGTTATCATAGCTGGAAGAAGAAAGTTCTTTTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAGATTGGCCCTCTTGTCGGTAGAGAGGAGAAAAGCCTTGAAGCTTTTGAAATTTCTCCCGATTCCAGCACAATCGCATTTATGGGCAATGAAGGCTATATCTTGTTAGTGTCAACAAAAACAAAGGAGCTCATTGGGACACTTAAGATGAATGGAACTGTTCGTTCTTTGGCATTTGCTGATGATGGGCGACAGCTACTGAGCTCTGGGGGTGATGGGCAAATCTATCACTGGGATTTGAGAACAAGAACATGCATTCACAAGGCTGTCGACGAAGGTTGCATTAATGGTACTGCACTATGTACCTCCCCAAATGGATTGTTTGCTGCTGGTTCTAACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGGAAGAAGAAGCCATTGAAAGCCATTGAAAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTAGCCATCTGTTCAAGAATGAAGCAAAGTAGTCTGAAGTTGATACACATTCCTTCTTTTACTATTTTTTCAAACTGGCCACCGCCGAAGAAGAATCTTCAATACCCTTCATGTCTGGACTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTATATAAACTACATCATTATCATCATGCTTAG

Protein sequence

MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQLVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDDYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLRAQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYHHA*

Homology

[Close]

BLAST of CsaV3_2G016400 vs. NCBI nr
Match: XP_004149687.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucumis sativus] >XP_031737145.1 U3 small nucleolar RNA-associated protein 18 homolog [Cucumis sativus] >KGN61987.1 hypothetical protein Csa_006014 [Cucumis sativus])

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 564/564 (100.00%), Postives = 564/564 (100.00%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ
Sbjct: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60

Query: 61  LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD 120
           LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD
Sbjct: 61  LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD 120

Query: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180
           YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR
Sbjct: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180

Query: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240
           AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG
Sbjct: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240

Query: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300
           GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI
Sbjct: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300

Query: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360
           QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI
Sbjct: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360

Query: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420
           SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW
Sbjct: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420

Query: 421 DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN 480
           DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN
Sbjct: 421 DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN 480

Query: 481 LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE 540
           LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE
Sbjct: 481 LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE 540

Query: 541 GGYMAVGNAAGKVLLYKLHHYHHA 565
           GGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 GGYMAVGNAAGKVLLYKLHHYHHA 564

[Close]

BLAST of CsaV3_2G016400 vs. NCBI nr
Match: XP_008457746.1 (PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis melo])

HSP 1 Score: 1044.6 bits (2700), Expect = 3.0e-301
Identity = 538/569 (94.55%), Postives = 552/569 (97.01%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEK  EENTL PSSP RNADAS+VDKSGLDTSRAKKRKKEH+ ED+Q
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           LV+E QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEK PALYIMDRSAD+SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           DY +LDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE ENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG---DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240
           RAQHAK+NPGTEWAQLDAQSRG   DDD+ SDDENAVALAGGYDNVDSIDDILRTSE LV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300
           VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420
           AFE+SPDSSTIAF+GNEGYILLVS KTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480
           IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIHIPSFTIFSNWPPPKKNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of CsaV3_2G016400 vs. NCBI nr
Match: KAA0045768.1 (U3 small nucleolar RNA-associated protein 18-like protein [Cucumis melo var. makuwa] >TYJ99515.1 U3 small nucleolar RNA-associated protein 18-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1018.5 bits (2632), Expect = 2.3e-293
Identity = 526/557 (94.43%), Postives = 540/557 (96.95%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEK  EENTL PSSP RNADAS+VDKSGLDTSRAKKRKKEH+ ED+Q
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           LV+E QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEK PALYIMDRSAD+SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           DY +LDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE ENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG---DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240
           RAQHAK+NPGTEWAQLDAQSRG   DDD+ SDDENAVALAGGYDNVDSIDDILRTSE LV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300
           VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420
           AFE+SPDSSTIAF+GNEGYILLVS KTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480
           IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIHIPSFTIFSNWPPPKKNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 541 DFSPEGGYMAVGNAAGK 553
           DFSPEGGYMAVGNAAGK
Sbjct: 541 DFSPEGGYMAVGNAAGK 557

[Close]

BLAST of CsaV3_2G016400 vs. NCBI nr
Match: XP_022963504.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata])

HSP 1 Score: 996.1 bits (2574), Expect = 1.2e-286
Identity = 510/570 (89.47%), Postives = 541/570 (94.91%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEKV E+NT+  SSP R  DASDV+ SG+DT+RAKKRKKEHK ED+Q
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           +VKE QKEM KLENFLFGSLYSPVEFGKDEE+NGF++EEK  ALYIMDRSA++SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           D GLLDES+NKEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE E SISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG----DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKL 240
           RAQHAK+NPGTEWAQLDAQSRG    DDDL+SDDENAVALA GYDNVDSIDDILRT+E L
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300
           V KSG KL+PGLL YSRLVDANA+EPSNGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 361 EAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420
           E FE+SPDSST+AF+GNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKP 480
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540
           LKAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CsaV3_2G016400 vs. NCBI nr
Match: XP_038901788.1 (U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901789.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901790.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901791.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901792.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901794.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901795.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901796.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida])

HSP 1 Score: 995.0 bits (2571), Expect = 2.7e-286
Identity = 515/569 (90.51%), Postives = 537/569 (94.38%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEKV  E+T+  SS  RN DASDV+ S LDT+R KKRKKEHK ED+Q
Sbjct: 1   MSLISQNVAVISSIEKVTGEDTVGLSSLSRNRDASDVENSVLDTTRGKKRKKEHKKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           LVKE QKEM KLENFLFGSLYSPVEFGKDEE+NGF+SEEK PALYIMDRSA++SLSAYE+
Sbjct: 61  LVKEQQKEMKKLENFLFGSLYSPVEFGKDEERNGFSSEEKVPALYIMDRSANNSLSAYEE 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           D+ LLDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKE  EN ISGSEYVSRL
Sbjct: 121 DFELLDESMNKEELQQRKPVWVDEEEEKATVNITNVSRLRKLRKEGDENLISGSEYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG---DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240
           RAQHAK+NPGTEWAQLDA SR    DDDLSSDDENAVALA GY NVDSIDDILRTSE LV
Sbjct: 181 RAQHAKLNPGTEWAQLDAPSRADSDDDDLSSDDENAVALADGYANVDSIDDILRTSENLV 240

Query: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300
           VKSG KLMPGLLGYSRLVDANAEEPSNGPINSVQFHRN+QLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGAKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 300

Query: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420
            FE+SPDSST+AF+GNEGYILLVSTKTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDGQ
Sbjct: 361 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480
           +YHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIH+PSFTIFSNWPPPKKNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCL 540

Query: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           DFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYQHA 569

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 1.0e-187
Identity = 350/545 (64.22%), Postives = 426/545 (78.17%), Query Frame = 0


Query: 33  DASDVDKSGL--DTSRAKKRKKE---HKIEDKQLVKEQKEMMKLENFLFGSLYSPVEFGK 92
           D  D ++ G   D +R K+RK E    K+E+ +LV    EM KLEN +FGSLYSPV FGK
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTEKEKQKLEESELV----EMKKLENLIFGSLYSPVTFGK 83

Query: 93  DEEQNGFNSEEKTPALYIMDRSADHSLSAYEDDYGLLDESTNKEEHQQ------RKPVWV 152
           +EE++G        AL+ +DRSA   +  YEDD G  DE  + EE+ Q       +  W 
Sbjct: 84  EEEEDG-------SALFHVDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWE 143

Query: 153 DEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLRAQHAKINPGTEWAQLDAQSRG 212
           DEEE++  V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAK+NPGT+WA+ D+Q   
Sbjct: 144 DEEEKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQI-- 203

Query: 213 DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKS-GGKLMPGLLGYSRLVDANAEE 272
            D  SSDD++     GG      +DDILRT+E LVVKS G KL  G L YS+LVDANA +
Sbjct: 204 VDGESSDDDD--TQDGG------VDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAAD 263

Query: 273 PSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGS 332
           PSNGPINSV FH+N+QLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GS
Sbjct: 264 PSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGS 323

Query: 333 QVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVS 392
           QVI++GRRKFFYS DL KAK DKIGPLVGREEKSLE FE+S DS+TIAF+GNEGYILLVS
Sbjct: 324 QVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVS 383

Query: 393 TKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGT 452
           TKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQ+Y WDLRT  C++K VDEG   GT
Sbjct: 384 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 443

Query: 453 ALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAI 512
           +LC+S NG LFA+G++ GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILAI
Sbjct: 444 SLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAI 503

Query: 513 CSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLH 565
            S M ++S+KL+H+PS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKLH
Sbjct: 504 VSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKLH 546

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 3.4e-82
Identity = 171/433 (39.49%), Postives = 254/433 (58.66%), Query Frame = 0


Query: 135 QRKPVWVDEE-EEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLRAQHAKINPGT-EW 194
           Q+KPVWVDEE E++  V++ N    + + K   E+ +S      RL+ +      G   W
Sbjct: 137 QKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHAMGGVPAW 196

Query: 195 AQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSGGKLMPGLLGYSR 254
           A+   +    DD S +DE               DD+L+ +    + +   L  G+L    
Sbjct: 197 AETTKRKTSSDDESEEDE---------------DDLLQRTGNF-ISTSTSLPRGILKMKN 256

Query: 255 LVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRK 314
              ANAE P+   I+SVQFH  +Q+++  GLD  +  FQ+DGK N KIQSI+LE  PI K
Sbjct: 257 CQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLERFPIFK 316

Query: 315 ASFLPDGSQVIIAG-RRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMG 374
           A F  +G +V+      K  Y  D++  K+  +  + G +EK + +FE+SPD S +   G
Sbjct: 317 ACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLING 376

Query: 375 NEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKA 434
             GY+ L++ KTKELIG++K+NG V +  F+ D +++ +S GDG++Y WD+ +R C+++ 
Sbjct: 377 IAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRKCLNRF 436

Query: 435 VDEGCINGTALCTSPNGLF-AAGSNSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLK 494
           VDEG + G ++ TS NG + A GSN G+VNIYN+   L     KP+KAI NL T V  L 
Sbjct: 437 VDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLT 496

Query: 495 FNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPK-KNLQYPSCLDFSPEGGYMAVGN 554
           FN   +ILAI S   + +++L+H+PS T+FSN+P  K KN+ +   +DFSP  GY A+GN
Sbjct: 497 FNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKNKNISHVHTMDFSPRSGYFALGN 553

Query: 555 AAGKVLLYKLHHY 562
             GK L+Y+LHHY
Sbjct: 557 EKGKALMYRLHHY 553

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.9e-79
Identity = 171/472 (36.23%), Postives = 273/472 (57.84%), Query Frame = 0


Query: 97  EEKTPALYIMDRSADHSLSAYEDDYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVS 156
           E+   AL    RS+   L    D+  + +E+ +    ++++PVWVDE++E   +   + +
Sbjct: 94  EDDEDALLQRLRSSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNN 153

Query: 157 RLRK-LRKEEHENSISGSEYVSRLRAQHAKINPGT-EWAQLDAQSR-GDDDLSSDDENAV 216
           R RK + K   E+ +S  +   RL+ +      G  +WA+  ++ R   DD S +DE   
Sbjct: 154 RFRKDIMKNASESKLSKDKLQKRLKEEFQHAMGGVPDWAEAGSKRRTSSDDESEEDE--- 213

Query: 217 ALAGGYDNVDSIDDILRTSEKLVVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHR 276
                       DD+L+ +    + +   L  G+L       ANAE P+   I+SVQFH 
Sbjct: 214 ------------DDLLQRTGNF-ISTSTSLPRGILKMKNCRPANAERPTTARISSVQFHP 273

Query: 277 NSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAG-RRKFFY 336
            +Q+++ +G+D  +  FQ+DGK N KIQSI+LE  PI KA F  +G +V+      K  Y
Sbjct: 274 GAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVLY 333

Query: 337 SLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKM 396
             D++  K+  +  + G +EK+++ FE+SPD S +   G  G+  L+S KTKELIG++K+
Sbjct: 334 VYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKI 393

Query: 397 NGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGTALCTSPNGLF-A 456
           NG + +  F+ D +++ +   +G++Y WD+ +R C+++ +DEG + G ++  S NG + A
Sbjct: 394 NGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNGQYVA 453

Query: 457 AGSNSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKL 516
            GS SG+VNIYN+   L     KP+KAI NL T V  L FN   +ILA+ SR  + +++L
Sbjct: 454 CGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEAVRL 513

Query: 517 IHIPSFTIFSNWPPPKKN-LQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 562
           +H+PS T+FSN+P  KK+ L     +DFSP GGY A+GN  G+ L+Y+LHHY
Sbjct: 514 VHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFALGNEKGRALMYRLHHY 549

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 276.6 bits (706), Expect = 6.4e-73
Identity = 168/526 (31.94%), Postives = 278/526 (52.85%), Query Frame = 0


Query: 62  VKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED-- 121
           +++  E ++LEN +FG++ +   F   E +       + P L   + + +  L   ED  
Sbjct: 1   MEKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEKLEDAE 60

Query: 122 ----DYGLLD-------------ESTNKEEHQ---QRKPVWVDEEEEKATVNITNVSRLR 181
               D G  D             ++T KE+ +   +   +W D ++E+  +++ + SRLR
Sbjct: 61  LFMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQDHSRLR 120

Query: 182 KLRKEEHENSISGSEYVSRLRAQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGY 241
           KLR+ E E+ ++G +Y  RLR Q  ++ P  EWA+    +  +D+ ++  E +V      
Sbjct: 121 KLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAKKQDVTEEEDEFNALSEKSVI----- 180

Query: 242 DNVDSIDDILRTSEKLVVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLL 301
               S+  + ++S   + +S   L PG +   RL DAN + PS+  I  +  H    LLL
Sbjct: 181 --PKSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYFPLLL 240

Query: 302 ATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKA 361
             G DR LR +Q+DGK N  + S+ L    ++ A F PDG +VI AGRRK+ Y  DL  A
Sbjct: 241 TCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWDLESA 300

Query: 362 KVDKIGPLVGRE--EKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVR 421
           +V K+  + G+E  + S+E F + P    IA  G  G+I L+   T +   + K+ G + 
Sbjct: 301 QVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIEGVLS 360

Query: 422 SLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGTALCTSP-NGLFAAGSNS 481
            + F  DG ++L      +++H+++  R+ + +   +  ++ T  C  P N   A GS S
Sbjct: 361 DVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAIGSKS 420

Query: 482 GIVNIYNRQ-EFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPS 541
           GIVNIY+ Q        KP+  ++N+T  ++ + F+ D+Q+LAI SR K+ +L+L+H+PS
Sbjct: 421 GIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLVHVPS 480

Query: 542 FTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 562
           F++F NWP     L   +CL F  +GG + VGN AG+V L+KL HY
Sbjct: 481 FSVFRNWPTSATPLGRVTCLAFG-KGGELCVGNEAGRVGLWKLAHY 518

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot
Match: P40362 (U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP18 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-57
Identity = 170/555 (30.63%), Postives = 270/555 (48.65%), Query Frame = 0


Query: 73  NFLFGSLYSPVEFGKDEEQNGFNSEE------------KTPALYIMDRSADHSLSAYEDD 132
           +F+F      VE  +DE     NSEE                 ++ D   + S    ED 
Sbjct: 43  DFIFNEQEMDVEDQEDEGSESDNSEEDEAQNGELDHVNNDQLFFVDDGGNEDSQDKNEDT 102

Query: 133 YGLLDE---STNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVS 192
             + DE   S++       +  W+D ++EK  V I   ++ +KLR   +E+ I+G  Y++
Sbjct: 103 MDVDDEDDSSSDDYSEDSEEAAWIDSDDEKIKVPILVTNKTKKLRTSYNESKINGVHYIN 162

Query: 193 RLRAQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRT--SEKL 252
           RLR+Q  KI P  +W   ++ S  DD+   ++E +  +  G  +++++  IL T  + K 
Sbjct: 163 RLRSQFEKIYPRPKWVDDESDSELDDEEDDEEEGSNNVING--DINALTKILSTTYNYKD 222

Query: 253 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 312
            + +   L P  L   RL DANA  PS+  I S+ FH +  LLL  G D+ LR + IDGK
Sbjct: 223 TLSNSKLLPPKKLDIVRLKDANASHPSHSAIQSLSFHPSKPLLLTGGYDKTLRIYHIDGK 282

Query: 313 RNTKIQSIFLEDCPIRKASFLPDGS-----QVIIAGRRKFFYSLDL--------VKAKVD 372
            N  + S+ L   PI+  +F    S      +  AGRR++ +S DL          AK++
Sbjct: 283 TNHLVTSLHLVGSPIQTCTFYTSLSNQNQQNIFTAGRRRYMHSWDLSLENLTHSQTAKIE 342

Query: 373 KIGPLVGRE--EKSLEAFEIS--PDSST------IAFMGNEGYI-LLVSTKTKELIGTLK 432
           K   L G E  ++S E F+++   +S T      +   GN G+I +L ST    L+G  K
Sbjct: 343 KFSRLYGHESTQRSFENFKVAHLQNSQTNSVHGIVLLQGNNGWINILHSTSGLWLMG-CK 402

Query: 433 MNGTV-------RSLAFADDGRQLLSSGGDGQIYHWDL-RTRTCIHKAVDEG-------C 492
           + G +       + ++       L++    G+++ +DL +    I +  D+G        
Sbjct: 403 IEGVITDFCIDYQPISRGKFRTILIAVNAYGEVWEFDLNKNGHVIRRWKDQGGVGITKIQ 462

Query: 493 INGTALCTSP---------NGLFAAGSNSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVD 552
           + G    T P         N   A GS SG VN+Y+R   +      P+ A++ LTT + 
Sbjct: 463 VGGGTTTTCPALQISKIKQNRWLAVGSESGFVNLYDRNNAMTSSTPTPVAALDQLTTTIS 522

Query: 553 FLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAV 562
            L+F+ D QIL + SR  + +L+L+H+PS ++FSNWP     L   + + FSP GG +AV
Sbjct: 523 NLQFSPDGQILCMASRAVKDALRLVHLPSCSVFSNWPTSGTPLGKVTSVAFSPSGGLLAV 582

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL
Match: A0A0A0LMJ5 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279240 PE=4 SV=1)

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 564/564 (100.00%), Postives = 564/564 (100.00%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ
Sbjct: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60

Query: 61  LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD 120
           LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD
Sbjct: 61  LVKEQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYEDD 120

Query: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180
           YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR
Sbjct: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180

Query: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240
           AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG
Sbjct: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240

Query: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300
           GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI
Sbjct: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300

Query: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360
           QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI
Sbjct: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360

Query: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420
           SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW
Sbjct: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420

Query: 421 DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN 480
           DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN
Sbjct: 421 DLRTRTCIHKAVDEGCINGTALCTSPNGLFAAGSNSGIVNIYNRQEFLGGKKKPLKAIEN 480

Query: 481 LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE 540
           LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE
Sbjct: 481 LTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPE 540

Query: 541 GGYMAVGNAAGKVLLYKLHHYHHA 565
           GGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 GGYMAVGNAAGKVLLYKLHHYHHA 564

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL
Match: A0A1S3C7I9 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=LOC103497366 PE=4 SV=1)

HSP 1 Score: 1044.6 bits (2700), Expect = 1.4e-301
Identity = 538/569 (94.55%), Postives = 552/569 (97.01%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEK  EENTL PSSP RNADAS+VDKSGLDTSRAKKRKKEH+ ED+Q
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           LV+E QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEK PALYIMDRSAD+SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           DY +LDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE ENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG---DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240
           RAQHAK+NPGTEWAQLDAQSRG   DDD+ SDDENAVALAGGYDNVDSIDDILRTSE LV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300
           VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420
           AFE+SPDSSTIAF+GNEGYILLVS KTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480
           IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIHIPSFTIFSNWPPPKKNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL
Match: A0A5D3BMG2 (U3 small nucleolar RNA-associated protein 18-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00820 PE=4 SV=1)

HSP 1 Score: 1018.5 bits (2632), Expect = 1.1e-293
Identity = 526/557 (94.43%), Postives = 540/557 (96.95%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEK  EENTL PSSP RNADAS+VDKSGLDTSRAKKRKKEH+ ED+Q
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           LV+E QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEK PALYIMDRSAD+SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           DY +LDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE ENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG---DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240
           RAQHAK+NPGTEWAQLDAQSRG   DDD+ SDDENAVALAGGYDNVDSIDDILRTSE LV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300
           VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420
           AFE+SPDSSTIAF+GNEGYILLVS KTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480
           IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIHIPSFTIFSNWPPPKKNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 541 DFSPEGGYMAVGNAAGK 553
           DFSPEGGYMAVGNAAGK
Sbjct: 541 DFSPEGGYMAVGNAAGK 557

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 996.1 bits (2574), Expect = 5.9e-287
Identity = 510/570 (89.47%), Postives = 541/570 (94.91%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SSIEKV E+NT+  SSP R  DASDV+ SG+DT+RAKKRKKEHK ED+Q
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           +VKE QKEM KLENFLFGSLYSPVEFGKDEE+NGF++EEK  ALYIMDRSA++SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           D GLLDES+NKEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE E SISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG----DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKL 240
           RAQHAK+NPGTEWAQLDAQSRG    DDDL+SDDENAVALA GYDNVDSIDDILRT+E L
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300
           V KSG KL+PGLL YSRLVDANA+EPSNGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 361 EAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420
           E FE+SPDSST+AF+GNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKP 480
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540
           LKAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 982.6 bits (2539), Expect = 6.7e-283
Identity = 504/570 (88.42%), Postives = 536/570 (94.04%), Query Frame = 0


Query: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60
           MSLISQNVAV+SS E V  +NT+  SS  R  DASDV+ SG+DT+R+KKRKKEHK ED+Q
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120
           +VKE QKEM KLENFLFGSLYSPVEFGKDEE+N F++EEK PALYIMDRSA++SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180
           D GLLDES++KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE E SISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 181 RAQHAKINPGTEWAQLDAQSRG----DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKL 240
           RAQHAK+NPGTEWAQLDAQSR     DDDLSSDDENAVALA GYDNVDSIDDILRT+E L
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300
           V KSG KL+PGLL YSRLVDANA+EPSNGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 361 EAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420
           E FE+SPDSST+AF+GNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKP 480
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540
           LKAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 565
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CsaV3_2G016400 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 657.9 bits (1696), Expect = 7.3e-189
Identity = 350/545 (64.22%), Postives = 426/545 (78.17%), Query Frame = 0


Query: 33  DASDVDKSGL--DTSRAKKRKKE---HKIEDKQLVKEQKEMMKLENFLFGSLYSPVEFGK 92
           D  D ++ G   D +R K+RK E    K+E+ +LV    EM KLEN +FGSLYSPV FGK
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTEKEKQKLEESELV----EMKKLENLIFGSLYSPVTFGK 83

Query: 93  DEEQNGFNSEEKTPALYIMDRSADHSLSAYEDDYGLLDESTNKEEHQQ------RKPVWV 152
           +EE++G        AL+ +DRSA   +  YEDD G  DE  + EE+ Q       +  W 
Sbjct: 84  EEEEDG-------SALFHVDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWE 143

Query: 153 DEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLRAQHAKINPGTEWAQLDAQSRG 212
           DEEE++  V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAK+NPGT+WA+ D+Q   
Sbjct: 144 DEEEKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQI-- 203

Query: 213 DDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKS-GGKLMPGLLGYSRLVDANAEE 272
            D  SSDD++     GG      +DDILRT+E LVVKS G KL  G L YS+LVDANA +
Sbjct: 204 VDGESSDDDD--TQDGG------VDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAAD 263

Query: 273 PSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGS 332
           PSNGPINSV FH+N+QLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GS
Sbjct: 264 PSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGS 323

Query: 333 QVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVS 392
           QVI++GRRKFFYS DL KAK DKIGPLVGREEKSLE FE+S DS+TIAF+GNEGYILLVS
Sbjct: 324 QVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVS 383

Query: 393 TKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGT 452
           TKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQ+Y WDLRT  C++K VDEG   GT
Sbjct: 384 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 443

Query: 453 ALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAI 512
           +LC+S NG LFA+G++ GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILAI
Sbjct: 444 SLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAI 503

Query: 513 CSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLH 565
            S M ++S+KL+H+PS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKLH
Sbjct: 504 VSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKLH 546

[Close]

BLAST of CsaV3_2G016400 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 50.1 bits (118), Expect = 7.0e-06
Identity = 45/193 (23.32%), Postives = 79/193 (40.93%), Query Frame = 0


Query: 266 INSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 325
           + ++ F  ++  LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 493

Query: 326 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVST-KTK 385
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 494 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 553

Query: 386 ELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGTALCT 445
             + T + N  V ++AF  DG+QL SS  DGQI  WD      ++       I G  + T
Sbjct: 554 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 613

Query: 446 SPNGLFAAGSNSG 458
                 AA S+SG
Sbjct: 614 DRRS--AANSSSG 621

[Close]

BLAST of CsaV3_2G016400 vs. TAIR 10
Match: AT1G15440.2 (periodic tryptophan protein 2 )

HSP 1 Score: 50.1 bits (118), Expect = 7.0e-06
Identity = 45/193 (23.32%), Postives = 79/193 (40.93%), Query Frame = 0


Query: 266 INSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 325
           + ++ F  ++  LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 394 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 453

Query: 326 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVST-KTK 385
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 454 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 513

Query: 386 ELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGTALCT 445
             + T + N  V ++AF  DG+QL SS  DGQI  WD      ++       I G  + T
Sbjct: 514 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 573

Query: 446 SPNGLFAAGSNSG 458
                 AA S+SG
Sbjct: 574 DRRS--AANSSSG 581

[Close]

BLAST of CsaV3_2G016400 vs. TAIR 10
Match: AT2G37160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.5e-04
Identity = 26/100 (26.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 332 YSLDLVKAKVDKIGPLVGRE--EKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELI-G 391
           +S+D  KAK  K  P+      + ++ +   S D + +A +G +GY+ +    T++L+ G
Sbjct: 283 FSVD--KAKYSKSNPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCG 342

Query: 392 TLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCI 429
                G +   A++ DG+ LL+ G D  +  W +  R  +
Sbjct: 343 VKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVV 380

[Close]

BLAST of CsaV3_2G016400 vs. TAIR 10
Match: AT2G37160.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.5e-04
Identity = 26/100 (26.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 332 YSLDLVKAKVDKIGPLVGRE--EKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELI-G 391
           +S+D  KAK  K  P+      + ++ +   S D + +A +G +GY+ +    T++L+ G
Sbjct: 312 FSVD--KAKYSKSNPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCG 371

Query: 392 TLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTCI 429
                G +   A++ DG+ LL+ G D  +  W +  R  +
Sbjct: 372 VKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVV 409

The following BLAST results are available for this feature:

BLAST of CsaV3_2G016400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149687.1	0.0e+00	100.00	U3 small nucleolar RNA-associated protein 18 homolog [Cucumis sativus] >XP_03173...	[more]
XP_008457746.1	3.0e-301	94.55	PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis melo]	[more]
KAA0045768.1	2.3e-293	94.43	U3 small nucleolar RNA-associated protein 18-like protein [Cucumis melo var. mak...	[more]
XP_022963504.1	1.2e-286	89.47	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata]	[more]
XP_038901788.1	2.7e-286	90.51	U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038...	[more]

BLAST of CsaV3_2G016400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	1.0e-187	64.22	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	3.4e-82	39.49	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	7.9e-79	36.23	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	6.4e-73	31.94	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
P40362	3.8e-57	30.63	U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of CsaV3_2G016400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMJ5	0.0e+00	100.00	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A1S3C7I9	1.4e-301	94.55	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BMG2	1.1e-293	94.43	U3 small nucleolar RNA-associated protein 18-like protein OS=Cucumis melo var. m...	[more]
A0A6J1HKC7	5.9e-287	89.47	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A6J1HWX2	6.7e-283	88.42	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of CsaV3_2G016400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	7.3e-189	64.22	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15440.1	7.0e-06	23.32	periodic tryptophan protein 2	[more]
AT1G15440.2	7.0e-06	23.32	periodic tryptophan protein 2	[more]
AT2G37160.1	6.5e-04	26.00	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G37160.2	6.5e-04	26.00	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 251..291 e-value: 2.0 score: 15.2 coord: 424..463 e-value: 3.0 score: 13.9 coord: 515..557 e-value: 17.0 score: 9.2 coord: 383..421 e-value: 1.1E-6 score: 38.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 387..421 e-value: 0.0078 score: 17.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 389..430 score: 11.64467
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 241..559 e-value: 2.2E-106 score: 357.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..209
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 35..563
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 35..563
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 389..424 score: 9.071966
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 262..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G016400.1	CsaV3_2G016400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding