CsaV3_2G014460 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGGTAAAAGAGAAAAAAAAGTAGTGGTTCATCATAGAGCTAAGGAAAGAAGTGTGGATAATGTGGAGAGATCAGTTGTGAGAGATAATAGATCAGAAAAGAAAAGTATTAGCAAAGACCCAAAGGCACACACAAAAGCTGATTAATTGAAAATGGCTGCTACCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTTTTAGAAGTAAAAGAAAATCATCACCCAATGACATTATTGTTCCTTTTGCTGCACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGTTAATATCATCTTATAACTCGATTCTCTCTCTTTTAGCTCTCCCTTCTTGATTTCCAGTCGTTGTTCAGTGTGTGACTTGACATATATGCATATTCTATGTTGTGCTGCAAGTAATTAACTACAGCTGTTATATTCCTTGATAAGAAAAAGGAAAAGAAAGTGAATGGTGGATAAAATAGAATGTCGATCCCTAGGAACTTACATAAGCAATTCGGTTGATGGGGTTTAGTATGACAAAGATGGATGAGATTGTGAACTCTCTTTAGAGTTGGTGAGCTTCAAGAGTACTTAAAACTATCATTCTTATGTTTTATTAAACCCTCATATTACACACTGCAAATATCCTATCACTTCAAACTCCATATTTCTCACAACTACGAAAGGCTTCCCAATTTCATTTTCTGGTCCTCAAACACTCCATAAGATGATCATCCACAAGCTTCTTATATTGTCAAACTACCCCCTAATTGTTTCAGAAACCTAAAAGGAGATTTTATGACACATATGATTGATTTTAGGGAACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAGTAAGTAATTAATCTCACATAATTCTAATATACATATCTTTTACTTTGAACTTAAATAACTGAAGGTAGGGCTAATTTGATATTCATAAATTGTTTGATTTAGATGTTTTGAGTGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGCCTCACTCCAGAGCAAAGGGGAGAAAGATAAATGCATTCAACACAACAGCTCCTAAATAAACCCTTTATATATCTATACATATACTTTCAATTTGATTTTTATATTTTTCCTATTGTAACAATGTGTTAATATATATATATATCTCATTAGCTTTCTAATTCTTATTATATTTTTGTATATTAAATGTGTTTTATTTTCTTTAATTTTTTCATTTTAAATTTTGGGTGTTTGAGAATATTGTATACTCAAAAATTATGTCAAAGTAATATAGTTTAAACCAATGAGCCAAACTTATTTAAACGATGTTGGGTGGATTTATTAAGGAGTCGAG ATGGCTGCTACCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTTTTAGAAGTAAAAGAAAATCATCACCCAATGACATTATTGTTCCTTTTGCTGCACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGAGTGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGCCTCACTCCAGAGCAAAGGGGAGAAAGATAA ATGGCTGCTACCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTTTTAGAAGTAAAAGAAAATCATCACCCAATGACATTATTGTTCCTTTTGCTGCACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGAGTGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGCCTCACTCCAGAGCAAAGGGGAGAAAGATAA MAATSTSINIFPFPSYQIFRSKRKSSPNDIIVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER* Homology
BLAST of CsaV3_2G014460 vs. NCBI nr
Match: XP_004153120.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucumis sativus] >KGN61770.1 hypothetical protein Csa_005912 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 2.0e-57 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. NCBI nr
Match: XP_008459263.1 (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 9.7e-52 Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. NCBI nr
Match: XP_038901776.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 164.9 bits (416), Expect = 3.9e-37 Identity = 79/110 (71.82%), Postives = 87/110 (79.09%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. NCBI nr
Match: XP_022963874.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35 Identity = 75/109 (68.81%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. NCBI nr
Match: XP_023521952.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023553311.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553319.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158.3 bits (399), Expect = 3.7e-35 Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. ExPASy TrEMBL
Match: A0A0A0LIM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238860 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 9.7e-58 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. ExPASy TrEMBL
Match: A0A1S3C9W1 (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498437 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 4.7e-52 Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. ExPASy TrEMBL
Match: A0A6J1HLG5 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464051 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35 Identity = 75/109 (68.81%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. ExPASy TrEMBL
Match: A0A6J1JSI3 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487154 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. ExPASy TrEMBL
Match: A0A6J1DHW0 (uncharacterized protein LOC111020203 OS=Momordica charantia OX=3673 GN=LOC111020203 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 74/112 (66.07%), Postives = 83/112 (74.11%), Query Frame = 0
BLAST of CsaV3_2G014460 vs. TAIR 10
Match: AT1G22630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-31 Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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