CsaV3_2G014270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G014270
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 11909992 .. 11910284 (+)
RNA-Seq ExpressionCsaV3_2G014270
SyntenyCsaV3_2G014270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGAGTTACGATGAGTCACGATGGGCCACCCTCTTCCATCGGCTGGTTCAACTTTTAGGTCAAGTTGAGTTTTCTTTTCGCTTTTCCCTTTTAATTCTTTTTTTTTTTTTTTTTAGTTTTTAATTTTAATTATTAATTCGAAGAAACGGAATTTGACTGCGAGAAGAAGAATCAGTGGAAGAAGGGCAAGTAGATCTGAAACTTCATACATACGCCGGAGATTGGGGGAGAAAAATCCGGGGACGGTCGGCGATTGTTTCTCGATTTCAACCATACCAAAAAAATAA

mRNA sequence

ATGGAGACGAGTTACGATGAGTCACGATGGGCCACCCTCTTCCATCGGCTGAAACGGAATTTGACTGCGAGAAGAAGAATCAGTGGAAGAAGGGCAAGTAGATCTGAAACTTCATACATACGCCGGAGATTGGGGGAGAAAAATCCGGGGACGGTCGGCGATTGTTTCTCGATTTCAACCATACCAAAAAAATAA

Coding sequence (CDS)

ATGGAGACGAGTTACGATGAGTCACGATGGGCCACCCTCTTCCATCGGCTGAAACGGAATTTGACTGCGAGAAGAAGAATCAGTGGAAGAAGGGCAAGTAGATCTGAAACTTCATACATACGCCGGAGATTGGGGGAGAAAAATCCGGGGACGGTCGGCGATTGTTTCTCGATTTCAACCATACCAAAAAAATAA

Protein sequence

METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSISTIPKK*
Homology
[Close]
BLAST of CsaV3_2G014270 vs. NCBI nr
Match: KGN61749.1 (hypothetical protein Csa_006712 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 5.0e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST 60
          METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST
Sbjct: 1  METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST 60

Query: 61 IPKK 65
          IPKK
Sbjct: 61 IPKK 64

[Close]
BLAST of CsaV3_2G014270 vs. ExPASy TrEMBL
Match: A0A0A0LL09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237680 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST 60
          METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST
Sbjct: 1  METSYDESRWATLFHRLKRNLTARRRISGRRASRSETSYIRRRLGEKNPGTVGDCFSIST 60

Query: 61 IPKK 65
          IPKK
Sbjct: 61 IPKK 64

The following BLAST results are available for this feature:
BLAST of CsaV3_2G014270 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61749.15.0e-27100.00hypothetical protein Csa_006712 [Cucumis sativus][more]
BLAST of CsaV3_2G014270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G014270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL092.4e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237680 PE=4 SV=1[more]
BLAST of CsaV3_2G014270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G014270.1CsaV3_2G014270.1mRNA