CsaV3_2G012530 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G012530
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	chr2: 10022583 .. 10026604 (+)
RNA-Seq Expression	CsaV3_2G012530
Synteny	CsaV3_2G012530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGAAACCCTACTCCTTCAGCGAAAAAGCACTCTTTTTTATTACCCTCAGATTCACCAAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCCCCTCTTTTCTCTCTCTTTCTTTCTTTGGAGCCCCAGTCGGCTACAAACCCTCTTCCGAAATCCGTAACCCAGAAATCCAAATTTCAATTTTCAGACAGGAACGAAACAAAACCCAGTCGAATCGATTTTCTCCATTGATTTGGGGTTTCTTGAGAATAGAGAAGAGGGAAAAGAAAGGGGCAATGGATTCGGATCAAGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACTTCTGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACCGTCGTTATGAGGGATAAGATCACTAGCAGACCCAGAGGGTTTGGCTTTGTTGTCTTTTCAGATCCCTCTGTTCTTGATCGAGTTCTTCAGGATAAGCACACTATCGATGGTAAAACGGTGAGTTACGAATCTTGTTTCTCTGTTCTTCTTTTGATATGTGGAGTTTTTCCCTTTCTGTTTTTTTTTATATATATATTTATAATTACCATGTGGGTTTTCTTTTATTTGACGTTTTTTTTTTTTTTTTTATCATGATGACTCTAGTTGGTGGATATGGATACAACTCATTTCAGTTGTTGTGGGGGGGTTTGATTCCACAATGGCACTAAATAGTTTTCTTTTGGGTGCCAAATGTTTGGTGCTTATTGGTTTTTTAGGGTGGCTTGTATTGATGCGTGTTTAACTTTCGATTCATGTGTTTTCTTTTCTTTGCTTGTTGTTTTTGTTGATTTATCTGTTGGTTTGGTGCATATTTTCTCATGAGGCGAGACATTGACAAAAGGGTCGGTTGTATTATGTAATTTCATTTCAATATGGTTTATGATTTCACTATGACCTACTAGACCCAATCATATTTCGTATTTTGTGTCTTTTCTCTTGGTAGCCAATTGTAGAGTATAGACTTGGAATATTAGAAGTGTGTGGCTATGAATCTGTTGGTTTCAACCGTTAAGTATGTCTCAAATTTTCTTTGCTTAATGTTATTTGTTCTTTTGCAGATGAAAATTTACTAGATCAATAGTATTCACACTGTTTCTGAAACTGTTTTCTTCTTCTGTTATTTAACTTCCGAAAATGCCTCACTTTATATATTCATATATTTTAAATTACTTTTTAGGATATGTAATTTATACTCTTTTATAGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCCAATGGTAGAAACTCTGGCGGCAGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCTACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGGCGTCCACGAGGATTTGGTTTTATATCTTTTGATACTGAAGAGGCTGTTGACAGAGTTTTGCACAAGACGTTTCACGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAGGATGCCAATCCAGGTGCAGGTGGCCGTACAATGAGTGGGGGTGCTGGTAGTGGTGGTTATCAGGGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCACAGGGCTCTAGTGGAGGTTTCCCACCATATGGTTCCTCTGGATACAATAATCCTGCATATGGGTATGGTTCATCGAATAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTTTGGTGCCCCTACAGCAGTAGCCTATGGTAACCCAAATGTTGCCAATGCTGGTTATGGGAGCGGTCCTCAAGGTGGACCTAGAAATTCATGGTCAGGTCAAGCTCCCTCCGGGTATGGAGCCATGGGTTATGGGAATGCAGCTCCTTGGGGTGGTGCTCCTGGTGGAAATGCTGGGGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCCGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGTAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCATACGGTAGTCAATCTGGTTATGGTACAACTGGAGGACGATCTGGTAGTGCATCAAATAGCAATGTTGGAGGTGGTCCAAGTGGGGGAGAATTACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGACAAGCTCAACAACAGTAATTTGATGATAAAAAAGTGAACTGGATTTCGCCATGTTCTGTGTCTCCCTGTTTGTTTTATGAGAATTGAGATCGATGTTTTCCAGTTGCTTATTAAAAAAAGTTTTCTTGTTGCTGACTGAAGCAGTGGCCCAATTTGGAACACAATGAGCCTGGTGGGGTTGCTTGAATCCAAGTAGCTTGCAGTATTTAATTTTTCTAGTCTAAAATAAGTAGCTGTTTTAGAAGTTTACTTGATGCTTCAGTTATTTAGTATTTTGTTGCCGAACGTAGTTATAATTTGATCTCTTTATGAATGTCTATTTAGCTGTCTGGAATCAATTTTTATCTTTTCACATTGTTTGAGTTGTAACGATTTGTAGTCCTTTTAATTATCAGTGGTTTTATACCTACTACTTTTATTCAGATATTTTTATTTTTCCTCTTGTTCTCTAGTTCATCAGGCATAGATGGTATGAAGAATTAAGTGATAGATGTTTCATTCTTTATCTTACATTTCAAATAGGAATACAAAAGGTTTAGTGTAGAGAGAGTTGTAGTGATAGATGATAGTGTTGGAGCCCTCGCTATTGGGTCGATCACTTCGTATGGTTAGACCTAATCGTAGTCGTAGTTGGCTCTTTAACAATGGCATAATCATTTTCCCCCTTCTATTTGCCCTTGTGTTACAGGAGGGATGCCCGGAGTTGTAAAAGTGGAGTCAAGAGAGTCCACTCATGGCTGAACACAGGCTTCGTAATGAAAGACCGTGTTGGGGATGTGTGTGTTCAGCATTTATGGAACTCGAGGACCTTTAATCGGTTGAAAAATGGATTTACCCCCGGAACTGAATATGTTCTCCTGCAAGGCCTTGCCAGCACTATCAAGTATTTCAAGTCTCTGGCATTGCAAGTCATGAGTTTATAGTAAATCTTCTCAAGGTAGTGGAATCCATACCTTCAAGATTTGGTTATGTAGGATACTTGGTATTGATTATGAGTAGGTATTGATTTGAGGTTCTTTGTTGAAACAGATTCCAATTAAGTTTTAGAGTGAATAAAGTAAAACTTCATAGCCATTTCTCCTGTCATTTAGCTAATAGTTGTCTTTGTAGCTTAGCCTAAATAGAATACTTGTGCGTTTACCTTTAACTATTGGTAAAGTAGCAATTGGCTCAATTTATTCCTTTGCTATTTTGCTTCAAGGTTGAAGTTTCGTCGTAAAGAACTTGATTTTAGAACAGGTGAAAAATTACGATCCTTTTGCTGCCCCTTTGGAGATTTTTAACAGATTTTCGATGCAGTCGGGGCTGATAATGAATCATGTCTTTTTATTCTAGATGCTGTTTCTTTATATGTGCTTATCTTGTTAGAAGAAAAGTGAAAGGATATTTTGAACTTGTAACTTTTTCTTTGGAATTTTGATAAGACTAGTCTCAGTGAGTTTATGTTTTTGATTGTTTCATTGCTTGAATTGTCTTTTATATAGGGAATCATTTATTTTTCTTTGGAGAATTTGGTTTGGCTTCAAAACAGGAATTTAGAGTAGGGTTCATTATTACCTATTTTAAGCAGATTGCAAATAAATATCACTGCTCTTTGTGCGAGTAGACATTAAT

mRNA sequence

ATGGATTCGGATCAAGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACTTCTGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACCGTCGTTATGAGGGATAAGATCACTAGCAGACCCAGAGGGTTTGGCTTTGTTGTCTTTTCAGATCCCTCTGTTCTTGATCGAGTTCTTCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCCAATGGTAGAAACTCTGGCGGCAGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCTACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGGCGTCCACGAGGATTTGGTTTTATATCTTTTGATACTGAAGAGGCTGTTGACAGAGTTTTGCACAAGACGTTTCACGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAGGATGCCAATCCAGGTGCAGGTGGCCGTACAATGAGTGGGGGTGCTGGTAGTGGTGGTTATCAGGGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCACAGGGCTCTAGTGGAGGTTTCCCACCATATGGTTCCTCTGGATACAATAATCCTGCATATGGGTATGGTTCATCGAATAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTTTGGTGCCCCTACAGCAGTAGCCTATGGTAACCCAAATGTTGCCAATGCTGGTTATGGGAGCGGTCCTCAAGGTGGACCTAGAAATTCATGGTCAGGTCAAGCTCCCTCCGGGTATGGAGCCATGGGTTATGGGAATGCAGCTCCTTGGGGTGGTGCTCCTGGTGGAAATGCTGGGGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCCGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGTAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCATACGGTAGTCAATCTGGTTATGGTACAACTGGAGGACGATCTGGTAGTGCATCAAATAGCAATGTTGGAGGTGGTCCAAGTGGGGGAGAATTACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGACAAGCTCAACAACAGTAA

Coding sequence (CDS)

ATGGATTCGGATCAAGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACTTCTGAGGATAAGCTTAAGGACTACTTTAGCAACTATGGTGAAGTTATGCATACCGTCGTTATGAGGGATAAGATCACTAGCAGACCCAGAGGGTTTGGCTTTGTTGTCTTTTCAGATCCCTCTGTTCTTGATCGAGTTCTTCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCCAAGAGGGCCTTATCACGGGAGGAACAGCAGACCCCTGCCAGAGCAAGCAATTCCAATGGTAGAAACTCTGGCGGCAGTGGTGGTGGAAACATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCTACATTGACTGAAGAAGGATTTAAAGAGTACTTTGAGGCTTATGGCCATGTAACTGATGTAGTAGTCATGTATGATCAAAATACTAGGCGTCCACGAGGATTTGGTTTTATATCTTTTGATACTGAAGAGGCTGTTGACAGAGTTTTGCACAAGACGTTTCACGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAGGATGCCAATCCAGGTGCAGGTGGCCGTACAATGAGTGGGGGTGCTGGTAGTGGTGGTTATCAGGGTTATGGGTCATCTGGTGGTGTCAATTCAAATTCTTATGATAATCGTATGGATTCCAATAGGTACATGCAATCACAGGGCTCTAGTGGAGGTTTCCCACCATATGGTTCCTCTGGATACAATAATCCTGCATATGGGTATGGTTCATCGAATAATGGTATGGGATATGGTGGTTATGGAAATTACAGTGGTTCAAATACTGGGTTTGGTGCCCCTACAGCAGTAGCCTATGGTAACCCAAATGTTGCCAATGCTGGTTATGGGAGCGGTCCTCAAGGTGGACCTAGAAATTCATGGTCAGGTCAAGCTCCCTCCGGGTATGGAGCCATGGGTTATGGGAATGCAGCTCCTTGGGGTGGTGCTCCTGGTGGAAATGCTGGGGCTGGCAGTGGAGGACCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCCGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGTAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCATACGGTAGTCAATCTGGTTATGGTACAACTGGAGGACGATCTGGTAGTGCATCAAATAGCAATGTTGGAGGTGGTCCAAGTGGGGGAGAATTACAGGGGAACAATGCTTACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACAGGTGGTTATGCTGGTGGACAAGCTCGACAAGCTCAACAACAGTAA

Protein sequence

MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ*

Homology

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BLAST of CsaV3_2G012530 vs. NCBI nr
Match: XP_004147161.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KAE8651801.1 hypothetical protein Csa_006061 [Cucumis sativus])

HSP 1 Score: 874.8 bits (2259), Expect = 3.3e-250
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG
Sbjct: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG
Sbjct: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
           PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG
Sbjct: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM
Sbjct: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 462

[Close]

BLAST of CsaV3_2G012530 vs. NCBI nr
Match: XP_008460677.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 857.4 bits (2214), Expect = 5.5e-245
Identity = 455/462 (98.48%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EEAVDRVLHKTFHDLNGKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEEAVDRVLHKTFHDLNGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPGAGGR+M GGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG
Sbjct: 181 VEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           GFPPYGSSGY+NPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP AVAYGNPNVANAGYGSG
Sbjct: 241 GFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPAAVAYGNPNVANAGYGSG 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
           PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG
Sbjct: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASNSNVGGG SGGELQGNNAYM
Sbjct: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSNVGGG-SGGELQGNNAYM 420

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CsaV3_2G012530 vs. NCBI nr
Match: XP_038874312.1 (heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida])

HSP 1 Score: 849.4 bits (2193), Expect = 1.5e-242
Identity = 450/463 (97.19%), Postives = 455/463 (98.27%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNSGGSGGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNSG  GGGNM+TKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGSGGGGNMKTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGGR+M GGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS
Sbjct: 181 QVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSS 240

Query: 241 GGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGS 300
           GGFPPYGSSGYNNP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPNVANAGYGS
Sbjct: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYGS 300

Query: 301 GPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360
           GPQGGPRNSWSGQA SGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY
Sbjct: 301 GPQGGPRNSWSGQASSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAY 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNA+
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAF 420

Query: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 MGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463

[Close]

BLAST of CsaV3_2G012530 vs. NCBI nr
Match: KAA0050741.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa] >TYJ95682.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 839.7 bits (2168), Expect = 1.2e-239
Identity = 452/479 (94.36%), Postives = 457/479 (95.41%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTID-----------------GKTVEAKRALSREEQQTPARASNSNGRNSGGS 120
           DRVLQDKHTID                   +VEAKRALSREEQQTPARASNSNGRNSGGS
Sbjct: 61  DRVLQDKHTIDEYRLGILEVCYYESVGFNCSVEAKRALSREEQQTPARASNSNGRNSGGS 120

Query: 121 GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEE 180
           GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EE
Sbjct: 121 GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEE 180

Query: 181 AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSY 240
           AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGR+M GGAGSGGYQGYGSSGGVNSNSY
Sbjct: 181 AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSY 240

Query: 241 DNRMDSNRYMQSQGSSGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPT 300
           DNRMDSNRYMQSQGSSGGFPPYGSSGY+NPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP 
Sbjct: 241 DNRMDSNRYMQSQGSSGGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPA 300

Query: 301 AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP 360
           AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP
Sbjct: 301 AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP 360

Query: 361 GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSN 420
           GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASNSN
Sbjct: 361 GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSN 420

Query: 421 VGGGPSGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           VGGG SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 VGGG-SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 478

[Close]

BLAST of CsaV3_2G012530 vs. NCBI nr
Match: XP_022138553.1 (heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia])

HSP 1 Score: 808.1 bits (2086), Expect = 3.8e-230
Identity = 433/465 (93.12%), Postives = 446/465 (95.91%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYF NYG+V+HTVVMRDKITSRPRGFGFVVF+DP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNS-GGSGGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARA NSN  RNS GGSGGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGR+M GGAG GGYQ YGSSGG NSNSYDNRMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYG 300
           SGGFPPYGSSGYNNP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPNVANAGYG
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPR++WSGQAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNN- 420
           YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASNSNVGGGPSGGELQGN+ 
Sbjct: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSG 420

Query: 421 AYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
            YMGNGYGDANGN+GYGNAAWRSDGGQVGYTGGYA GQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.5e-123
Identity = 270/460 (58.70%), Postives = 310/460 (67.39%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N   S G    N +TKKIFVGGLPP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN-KTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQ
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPG GGR+M GG GSGGYQGYG     N +SYD RMDSNR++Q Q    
Sbjct: 181 VEVKRALPKDANPGGGGRSM-GGGGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGN 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           G P YGSSGY     GYG+ +NG GYG YG Y+GS  G+GA     YG  N+  AGYGS 
Sbjct: 241 GLPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSS 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
               PRNSW   A SGYG  GYG+         G A +G G PG+AP   SP    +GY 
Sbjct: 301 TGVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP----SGYS 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYG       GY G D  YG+Q+ YG  GGR     ++N G G           YM
Sbjct: 361 NQGYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSG----------GYM 411

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 461
           G GYGD          +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 GGGYGD---------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-39
Identity = 132/360 (36.67%), Postives = 182/360 (50.56%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G +   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEE 126
           + HTIDG+ VE KRA++REE   P               G ++  KK+FVGG+     E 
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP---------------GAHVTVKKLFVGGIKEDTEEH 129

Query: 127 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 186
             +EYFE YG +  + ++ D+ + + RGF F++FD  + VD+++ + +H +NG   EV++
Sbjct: 130 HLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 189

Query: 187 ALPK--------------------DANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDN 246
           AL K                    D+  G    +  GG   GG  GYG   G   N Y+ 
Sbjct: 190 ALSKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNG 249

Query: 247 RMDSNRYMQSQGSSGGFPPYG---SSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP 306
                   Q  G+ GG P YG     GY   A GYG+   G G GGY NY G N G G  
Sbjct: 250 YGGG----QGGGNYGGGPSYGGGRGGGYGGGA-GYGNQGGGYG-GGYDNYGGGNYG-GGG 309

Query: 307 TAVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGG 343
               +GN N  ++ YG    GG   ++ G    G G  G GN  P G A GGN G G GG
Sbjct: 310 NYNDFGNYNQQSSNYGPMKSGG---NFGGNRSMGGGPYGGGNYGP-GNASGGN-GGGYGG 342

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot
Match: P51990 (Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-38
Identity = 131/370 (35.41%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++++  +G++   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEE 126
           + HTIDG+ VE KRA++REE   P               G ++  KK+FVGG+     E 
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP---------------GAHVTVKKLFVGGIKEDTEEH 129

Query: 127 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 186
             +EYFE YG +    ++ D+ + + RGFGF++F+  + VD+++ + +H +NG   EV++
Sbjct: 130 HLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRK 189

Query: 187 ALPK--------------------------DANPGAGGRTMSGGAGSGGYQGYGSS---- 246
           AL K                          +   G GG    G  G GG +GYG      
Sbjct: 190 ALSKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDGYNGY 249

Query: 247 GGVNSNSYDNRMDSNRYMQSQGSSGGFPPYGSSGYNNPAYGYGSS--NNGMGY-GGYGNY 306
           GG    +Y   +D  + + S G+ GG P YG+ G     YG G S  N G GY GGY NY
Sbjct: 250 GGGQGGTY---LDEKQNLYSSGNFGGGPSYGAGG-GRGGYGGGPSYGNQGGGYGGGYDNY 309

Query: 307 SGSNTGFGAPTAVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAP 343
            G N G G      +GN N  ++ YG    GG   ++ G    G G  G GN  P G   
Sbjct: 310 GGGNYG-GGGNYNDFGNYNQQSSSYGPMKSGG---NFGGNRSMG-GPYGGGNYGP-GNGS 354

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.0e-36
Identity = 141/397 (35.52%), Postives = 189/397 (47.61%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET++D L+++F  +G++   VVMRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEE 126
           + H +DG+ VE KRA+SRE+   P               G ++  KKIFVGG+     E 
Sbjct: 88  RPHKVDGRVVEPKRAVSREDSARP---------------GAHLTVKKIFVGGIKEDTEEY 147

Query: 127 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 186
             ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +N    EVK+
Sbjct: 148 HLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKK 207

Query: 187 ALPKDANPGAGGRTMSGGAGS-----GGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 246
           AL K     A  +   GG GS     GG  G G  GG  +        +       G  G
Sbjct: 208 ALSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGGGGNFGRGGGFGNRGGYGGGGGRG 267

Query: 247 GFPPYGSSGYN-----NPAYGYGSSNNGMGYG---GYGNYSGSNTGFGAPTAVAYGNPNV 306
           G    G  GYN        YG G    G GYG   GYGN  G   G G       G  + 
Sbjct: 268 GGYGGGGDGYNGFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYGGGGGGGGAGGGGYDG 327

Query: 307 ANAGYGSGPQGGPRN---SWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTG 366
            N G   G  GG  N   S+ GQ  S YG M  GN +       G +  GSGG  S P G
Sbjct: 328 YNEGGNFG--GGNYNDFGSYGGQQQSNYGPMKAGNFS-------GRSTGGSGGSSSGPYG 383

Query: 367 HSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQ 387
                            GG+G+ G G GGG GSYG +
Sbjct: 388 -----------------GGYGSGGGGGGGGGGSYGGR 383

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot
Match: O88569 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 2.0e-35
Identity = 136/391 (34.78%), Postives = 191/391 (48.85%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++Y+  +G++   VVMRD  + R RGFGFV FS  + +D  +  
Sbjct: 22  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEE 126
           + H+IDG+ VE KRA++REE                G  G ++  KK+FVGG+     E 
Sbjct: 82  RPHSIDGRVVEPKRAVAREE---------------SGKPGAHVTVKKLFVGGIKEDTEEH 141

Query: 127 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 186
             ++YFE YG +  + ++ D+ + + RGFGF++FD  + VD+++ + +H +NG   EV++
Sbjct: 142 HLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 201

Query: 187 ALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSGGFPPY 246
           AL +           S  +G GG  G+G                     S+G  G F P 
Sbjct: 202 ALSRQEMQ----EVQSSRSGRGGNFGFG--------------------DSRGGGGNFGPG 261

Query: 247 GSSGYNNPAYGYGSSNN-GMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSGPQGG 306
             S +   + GYGS    G GY GYG                 G P   N G GS   GG
Sbjct: 262 PGSNFRGGSDGYGSGRGFGDGYNGYG-----------------GGPGGGNFG-GSPGYGG 321

Query: 307 PRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGS----GGPGSAPTGHSP--GGAAAG 366
            R  + G  P GYG  G G    +    GGN G+GS    G     P+ + P   G   G
Sbjct: 322 GRGGYGGGGP-GYGNQGGGYGGGYDNYGGGNYGSGSYNDFGNYNQQPSNYGPMKSGNFGG 353

Query: 367 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGY 390
             N G  YGG GN G G  GG G YG +S Y
Sbjct: 382 SRNMGGPYGG-GNYGPGGSGGSGGYGGRSRY 353

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL
Match: A0A0A0LLG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 107 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 166

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP
Sbjct: 167 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 226

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ
Sbjct: 227 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 286

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG
Sbjct: 287 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 346

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG
Sbjct: 347 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 406

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
           PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG
Sbjct: 407 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 466

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM
Sbjct: 467 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 526

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 527 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 568

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL
Match: A0A1S3CDG3 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103499446 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 2.7e-245
Identity = 455/462 (98.48%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EEAVDRVLHKTFHDLNGKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEEAVDRVLHKTFHDLNGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPGAGGR+M GGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG
Sbjct: 181 VEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           GFPPYGSSGY+NPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP AVAYGNPNVANAGYGSG
Sbjct: 241 GFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPAAVAYGNPNVANAGYGSG 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
           PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG
Sbjct: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASNSNVGGG SGGELQGNNAYM
Sbjct: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSNVGGG-SGGELQGNNAYM 420

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL
Match: A0A5D3B757 (Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00080 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 5.8e-240
Identity = 452/479 (94.36%), Postives = 457/479 (95.41%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTID-----------------GKTVEAKRALSREEQQTPARASNSNGRNSGGS 120
           DRVLQDKHTID                   +VEAKRALSREEQQTPARASNSNGRNSGGS
Sbjct: 61  DRVLQDKHTIDEYRLGILEVCYYESVGFNCSVEAKRALSREEQQTPARASNSNGRNSGGS 120

Query: 121 GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEE 180
           GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFD+EE
Sbjct: 121 GGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDSEE 180

Query: 181 AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSY 240
           AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGR+M GGAGSGGYQGYGSSGGVNSNSY
Sbjct: 181 AVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGGAGSGGYQGYGSSGGVNSNSY 240

Query: 241 DNRMDSNRYMQSQGSSGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPT 300
           DNRMDSNRYMQSQGSSGGFPPYGSSGY+NPAYGYGSSNNGMGYGGYGNYSGSNTGFGAP 
Sbjct: 241 DNRMDSNRYMQSQGSSGGFPPYGSSGYSNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPA 300

Query: 301 AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP 360
           AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP
Sbjct: 301 AVAYGNPNVANAGYGSGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGP 360

Query: 361 GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSN 420
           GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGR+GSASNSN
Sbjct: 361 GSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRTGSASNSN 420

Query: 421 VGGGPSGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
           VGGG SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 VGGG-SGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 478

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL
Match: A0A6J1CDB1 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111009685 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 1.9e-230
Identity = 433/465 (93.12%), Postives = 446/465 (95.91%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYF NYG+V+HTVVMRDKITSRPRGFGFVVF+DP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNS-GGSGGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARA NSN  RNS GGSGGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGR+M GGAG GGYQ YGSSGG NSNSYDNRMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYG 300
           SGGFPPYGSSGYNNP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPNVANAGYG
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPR++WSGQAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNN- 420
           YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASNSNVGGGPSGGELQGN+ 
Sbjct: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSG 420

Query: 421 AYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
            YMGNGYGDANGN+GYGNAAWRSDGGQVGYTGGYA GQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL
Match: A0A6J1H3Z2 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460283 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.3e-228
Identity = 437/466 (93.78%), Postives = 445/466 (95.49%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG-RNS-GGSGGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSN  RNS GG GGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGR+M    G GGYQGYGSSGGVNSNSYD+ MDS+RYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSM----GGGGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYG 300
            GGFPPYGSSGY+NP YGYGSSNNGMGYGGYGNYSGSNTG+GAP AVAYGNPN ANAGYG
Sbjct: 241 GGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYG 300

Query: 301 SGPQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAG 360
           SGPQGGPR+SWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGG AAG
Sbjct: 301 SGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGG-AAG 360

Query: 361 YGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNN- 420
           YGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSGSASNSNVGGGPSGGE+QGN+ 
Sbjct: 361 YGNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSG 420

Query: 421 AYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
            YMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ
Sbjct: 421 GYMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CsaV3_2G012530 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 443.7 bits (1140), Expect = 1.8e-124
Identity = 270/460 (58.70%), Postives = 310/460 (67.39%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           MDSDQGKLF+GGISWET EDKL+++F+NYGEV   +VMRDK+T RPRGFGFV+FSDPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R  N N   S G    N +TKKIFVGGLPP
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYN-KTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           TLT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQ
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPG GGR+M GG GSGGYQGYG     N +SYD RMDSNR++Q Q    
Sbjct: 181 VEVKRALPKDANPGGGGRSM-GGGGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGN 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           G P YGSSGY     GYG+ +NG GYG YG Y+GS  G+GA     YG  N+  AGYGS 
Sbjct: 241 GLPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSS 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
               PRNSW   A SGYG  GYG+         G A +G G PG+AP   SP    +GY 
Sbjct: 301 TGVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP----SGYS 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
           NQGYGYG       GY G D  YG+Q+ YG  GGR     ++N G G           YM
Sbjct: 361 NQGYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSG----------GYM 411

Query: 421 GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQ 461
           G GYGD          +WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 GGGYGD---------GSWRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CsaV3_2G012530 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 431.8 bits (1109), Expect = 7.0e-121
Identity = 266/463 (57.45%), Postives = 316/463 (68.25%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M+SDQGKLFIGGISW+T E+ L++YFSN+GEV+   VMR+K T RPRGFGFV FSDP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           DRVLQDKH ID + V+ KRA+SREEQ    R+   N   +  S G N+RTKKIFVGGLPP
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDS-GANVRTKKIFVGGLPP 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
            LT + F+ YFE YG V+D V+M DQ T+RPRGFGF+SFD+E++VD VLHKTFHDLNGKQ
Sbjct: 121 ALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQ 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
           VEVKRALPKDANPG       G  G+GG+ GYG SGG   + Y+ R+DSNRYMQ Q +  
Sbjct: 181 VEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG---SGYEGRVDSNRYMQPQNTGS 240

Query: 241 GFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGNPNVANAGYGSG 300
           G+PPYG SGY    YGYGS  NG+GYGG+G       G+G P    YGNP+V  AG+GS 
Sbjct: 241 GYPPYGGSGYGT-GYGYGS--NGVGYGGFG-------GYGNPAGAPYGNPSVPGAGFGS- 300

Query: 301 PQGGPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYG 360
              GPR+SW  QAPSGYG +GYGNAAPWG         GSGGPGSA  G +  GA+AGY 
Sbjct: 301 ---GPRSSWGAQAPSGYGNVGYGNAAPWG---------GSGGPGSAVMGQA--GASAGY- 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYM 420
                    G+QGYGYGG D SYG+ S YG  GGRSG+  N++ GG              
Sbjct: 361 ---------GSQGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGG-------------- 404

Query: 421 GNGYGDA-NGNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 463
             GY DA +G+ GYGN   + + GQ GY GGY  G  RQAQQQ
Sbjct: 421 --GYADALDGSGGYGN--HQGNNGQAGYGGGY--GSGRQAQQQ 404

[Close]

BLAST of CsaV3_2G012530 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-55
Identity = 199/499 (39.88%), Postives = 263/499 (52.71%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           + V+ +KH IDG+ VEAK+A+ R++Q      + SN  +  GS GG  RT+KIFVGGLP 
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQN---MVNRSNSSSIQGSPGGPGRTRKIFVGGLPS 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK 
Sbjct: 121 SVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKM 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSG---------GY-QGYGSSGGVNSNSYDNRMDSN 240
           VEVKRA+PK+ +PG     +  G   G         GY QG+  +       Y  RMD  
Sbjct: 181 VEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAA---VGGYGLRMD-- 240

Query: 241 RYMQSQGSSGGFPPYGS--SGYNNPAYGYGSSNN-----GMGYGGYGNYSGSNTGFGAPT 300
                    G F P G+  SG+ N + GYG + N       G+ G  NY+G N  +G   
Sbjct: 241 ---------GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGM 300

Query: 301 AVAY-GNPNVAN--AGYGSGPQGG--------PRNSWSGQAPSGY-------------GA 360
           +  Y GN N      GY  G  GG         RN W       Y             G 
Sbjct: 301 SPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGG 360

Query: 361 MGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGG 420
              GN    G  P GN+G   G PG        G  A    N  +GYGG G  G+G   G
Sbjct: 361 SSSGNNTLSG--PFGNSGVNWGAPGG-------GNNAVSNENVKFGYGGNGESGFGL--G 420

Query: 421 DGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYMGNGYGDANGNTGYGNAAWR 455
            G Y +++        S S S+++     +G +  G   + GNG         Y +  WR
Sbjct: 421 TGGYAARNPGANKAAPSSSFSSASATNN-TGYDTAGLAEFYGNG-------AVYSDPTWR 462

[Close]

BLAST of CsaV3_2G012530 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-55
Identity = 199/499 (39.88%), Postives = 263/499 (52.71%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
           M SD GKLFIGGISW+T+E++LK+YFS++GEV+  V+++D+ T R RGFGFVVF+DP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
           + V+ +KH IDG+ VEAK+A+ R++Q      + SN  +  GS GG  RT+KIFVGGLP 
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQN---MVNRSNSSSIQGSPGGPGRTRKIFVGGLPS 120

Query: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
           ++TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK 
Sbjct: 121 SVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKM 180

Query: 181 VEVKRALPKDANPGAGGRTMSGGAGSG---------GY-QGYGSSGGVNSNSYDNRMDSN 240
           VEVKRA+PK+ +PG     +  G   G         GY QG+  +       Y  RMD  
Sbjct: 181 VEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAA---VGGYGLRMD-- 240

Query: 241 RYMQSQGSSGGFPPYGS--SGYNNPAYGYGSSNN-----GMGYGGYGNYSGSNTGFGAPT 300
                    G F P G+  SG+ N + GYG + N       G+ G  NY+G N  +G   
Sbjct: 241 ---------GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGM 300

Query: 301 AVAY-GNPNVAN--AGYGSGPQGG--------PRNSWSGQAPSGY-------------GA 360
           +  Y GN N      GY  G  GG         RN W       Y             G 
Sbjct: 301 SPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGG 360

Query: 361 MGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGG 420
              GN    G  P GN+G   G PG        G  A    N  +GYGG G  G+G   G
Sbjct: 361 SSSGNNTLSG--PFGNSGVNWGAPGG-------GNNAVSNENVKFGYGGNGESGFGL--G 420

Query: 421 DGSYGSQSGYGTTGGRSGSASNSNVGGGPSGGELQGNNAYMGNGYGDANGNTGYGNAAWR 455
            G Y +++        S S S+++     +G +  G   + GNG         Y +  WR
Sbjct: 421 TGGYAARNPGANKAAPSSSFSSASATNN-TGYDTAGLAEFYGNG-------AVYSDPTWR 462

[Close]

BLAST of CsaV3_2G012530 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-52
Identity = 190/468 (40.60%), Postives = 253/468 (54.06%), Query Frame = 0


Query: 3   SDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDR 62
           SD GKLFIGGISW+T E++L++YF  YG+++  V+MRD+ T R RGFGF+VF+DPSV +R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGKTVEAKRALSREEQQTPARASNSN---GRNSGGSGGGNMRTKKIFVGGLP 122
           V+ DKH IDG+TVEAK+A+ R++QQ   R ++       + GG+GGG  RTKKIFVGGLP
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGG-ARTKKIFVGGLP 131

Query: 123 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 182
            ++TE  FK YF+ +G + DVVVMYD NT+RPRGFGFI+FD+EE+VD VLHKTFH+LNGK
Sbjct: 132 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGK 191

Query: 183 QVEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGV-----NSNSYDNRMDSNRYMQ 242
            VEVKRA+PK+ +     R+           GYG++ GV     ++NSY N         
Sbjct: 192 MVEVKRAVPKELSSTTPNRS--------PLIGYGNNYGVVPNRSSANSYFNSFPPGYNNN 251

Query: 243 SQGSSGGFPPYGSSGYNNPAYGYGSSNNGMGYGGYGNYSGSNTGFGAPTAVAYGN---PN 302
           + GS+G F P GS      ++G G +          N+ G+  G+       Y N   PN
Sbjct: 252 NLGSAGRFSPIGSGRNAFSSFGLGLNQE---LNLNSNFDGNTLGYSRIPGNQYFNSASPN 311

Query: 303 VANA--GYGSGPQG---GPRNSWSGQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSA 362
             N+  GY  G        R+ W  ++ S       G +    G   GN G  S    + 
Sbjct: 312 RYNSPIGYNRGDSAYNPSNRDLWGNRSDSSGPGWNLGVSV---GNNRGNWGLSSVVSDNN 371

Query: 363 PTGHSPGGAAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTTGGRSGSASNSNVGG 422
             G S G   AG G  G  + G  N      G DGS G    Y  +   S S    ++  
Sbjct: 372 GYGRSYG---AGSGLSGLSFAGNTN------GFDGSIGEL--YRGSSVYSDSTWQQSMPH 431

Query: 423 GPSGGELQGNNAYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGG 455
             S  EL G    +   YG    N G   +A  S+    GY+G Y  G
Sbjct: 432 HQSSNELDG----LSRSYGFGIDNVGSDPSANASE----GYSGNYNVG 445

The following BLAST results are available for this feature:

BLAST of CsaV3_2G012530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147161.1	3.3e-250	100.00	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KAE8651801.1 hypoth...	[more]
XP_008460677.1	5.5e-245	98.48	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo]	[more]
XP_038874312.1	1.5e-242	97.19	heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida]	[more]
KAA0050741.1	1.2e-239	94.36	heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa] >TYJ95...	[more]
XP_022138553.1	3.8e-230	93.12	heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia]	[more]

BLAST of CsaV3_2G012530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	2.5e-123	58.70	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P51989	1.3e-39	36.67	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
P51990	1.5e-38	35.41	Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
P51992	3.0e-36	35.52	Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
O88569	2.0e-35	34.78	Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnp...	[more]

BLAST of CsaV3_2G012530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLG6	1.6e-250	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1	[more]
A0A1S3CDG3	2.7e-245	98.48	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3B757	5.8e-240	94.36	Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1CDB1	1.9e-230	93.12	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1H3Z2	1.3e-228	93.78	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CsaV3_2G012530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	1.8e-124	58.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	7.0e-121	57.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	3.0e-55	39.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	3.0e-55	39.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.1e-52	40.60	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 456..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106
None	No IPR available	PANTHER	PTHR48035:SF2	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..460
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..460
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 4.47779E-36 score: 125.776
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 112..184 e-value: 6.0E-25 score: 98.9 coord: 7..78 e-value: 6.0E-20 score: 82.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..75 e-value: 1.1E-14 score: 54.0 coord: 113..171 e-value: 5.3E-16 score: 58.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 16.84124
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 111..188 score: 18.580891
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 86..207 e-value: 1.5E-26 score: 94.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..85 e-value: 3.5E-24 score: 86.8
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 109..188 e-value: 6.94406E-45 score: 149.438
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..107
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 110..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G012530.1	CsaV3_2G012530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding