CsaV3_2G008660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G008660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	DUF4228 domain-containing protein
Location	chr2: 5026014 .. 5026820 (+)
RNA-Seq Expression	CsaV3_2G008660
Synteny	CsaV3_2G008660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGTAAGTGGATATATATGTTTAGTTAAAACGTTTCCATTTGGTTCCTATAAGTTATACTAATTTTCAATGCCTTCTTTATTGTCATATCCCTCTCCTTACTCTCTTCTCCTTTCCTATTTCTGCCTCTCTCAATTTCAAACTTTGTTGTTTCAGTATTTTCACACTTTTTTTCATGCCTAAATTAAACATATATATATTTTTAGGCTTTTAATATACTTTTTATATATATATATATAAAGTTACTCTCCTTCCTCCTCCCTATCCTCTCAAAAACAAGAAAAACGAGAGATTCTAAAATTCCACAAATGGGTGGATGTATTTCCCACCGATCATCTTCCACCGCCGCCGCCGCCGCCGACAGAGTCCAAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCCGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCGGCGCTGAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCCTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGAAGATTGGAGGTGTACGACAGCGGGGAAGTCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAGGGAAAAGCCGGGGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA

mRNA sequence

ATGACAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCCGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCGGCGCTGAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCCTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGAAGATTGGAGGTGTACGACAGCGGGGAAGTCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAGGGAAAAGCCGGGGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA

Coding sequence (CDS)

ATGACAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCCGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCGGCGCTGAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCCTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGAAGATTGGAGGTGTACGACAGCGGGGAAGTCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAGGGAAAAGCCGGGGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA

Protein sequence

MTVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLER*

Homology

[Close]

BLAST of CsaV3_2G008660 vs. NCBI nr
Match: KAE8651677.1 (hypothetical protein Csa_021330 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MTVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKV 60
           MTVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKV
Sbjct: 1   MTVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKV 60

Query: 61  YFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQ 120
           YFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQ
Sbjct: 61  YFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQ 120

Query: 121 WRPLLDTIREKPGNNCGRIDSDLER 146
           WRPLLDTIREKPGNNCGRIDSDLER
Sbjct: 121 WRPLLDTIREKPGNNCGRIDSDLER 145

[Close]

BLAST of CsaV3_2G008660 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF
Sbjct: 22  VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 81

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR
Sbjct: 82  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 141

Query: 123 PLLDTIREKPGNNCGRIDSDLER 146
           PLLDTIREKPGNNCGRIDSDLER
Sbjct: 142 PLLDTIREKPGNNCGRIDSDLER 164

[Close]

BLAST of CsaV3_2G008660 vs. NCBI nr
Match: XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           VVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVSTAASPAL+PD VLQPGKVYF
Sbjct: 20  VVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVSTAASPALDPDAVLQPGKVYF 79

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           ILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE A+GGE+W+CT AGKSRQWR
Sbjct: 80  ILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCETAEGGEEWKCTAAGKSRQWR 139

Query: 123 PLLDTIREKPGNNCGRIDSDLER 146
           PLLDTI+EKP N+C RI+SDLER
Sbjct: 140 PLLDTIKEKPANSCERIESDLER 162

[Close]

BLAST of CsaV3_2G008660 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46
Identity = 99/142 (69.72%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           +VHLNGHVQHFHSPITARQV G  PPPAEYFI TAAQLVS A SPALNPD +LQPGKVYF
Sbjct: 21  LVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSLAVSPALNPDAILQPGKVYF 80

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           +LP STLHPDVS +DL+SIAR+LTAAAKSA +    PPC A  GG+ W+  T  KSRQW+
Sbjct: 81  LLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPCVAVGGGDGWKAPTTAKSRQWK 140

Query: 123 PLLDTIREKPGNNCGRIDSDLE 145
           P LDTI+EK  N   + +SDL+
Sbjct: 141 PFLDTIQEKAVN---KSESDLQ 155

[Close]

BLAST of CsaV3_2G008660 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 4.9e-46
Identity = 99/142 (69.72%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           +VHLNGHVQHFHSPITA QV G  PPPAEYFI TAAQLVS A SPALNPD +LQPGKVYF
Sbjct: 21  LVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVSLAVSPALNPDAILQPGKVYF 80

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           +LP STLHPDVS +DL+SIAR+LTAAAKSA +    PPC A  GG DW+   A KSRQW+
Sbjct: 81  LLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP---PPCVAVGGGNDWKAPVAAKSRQWK 140

Query: 123 PLLDTIREKPGNNCGRIDSDLE 145
           P LDTI+EK  N   + +SDL+
Sbjct: 141 PFLDTIQEKAVN---KSESDLQ 156

[Close]

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF
Sbjct: 22  VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 81

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR
Sbjct: 82  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 141

Query: 123 PLLDTIREKPGNNCGRIDSDLER 146
           PLLDTIREKPGNNCGRIDSDLER
Sbjct: 142 PLLDTIREKPGNNCGRIDSDLER 164

[Close]

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.2e-67
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           VVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVSTAASPAL+PD VLQPGKVYF
Sbjct: 20  VVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVSTAASPALDPDAVLQPGKVYF 79

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           ILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE A+GGE+W+CT AGKSRQWR
Sbjct: 80  ILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCETAEGGEEWKCTAAGKSRQWR 139

Query: 123 PLLDTIREKPGNNCGRIDSDLER 146
           PLLDTI+EKP N+C RI+SDLER
Sbjct: 140 PLLDTIKEKPANSCERIESDLER 162

[Close]

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.2e-67
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           VVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVSTAASPAL+PD VLQPGKVYF
Sbjct: 20  VVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVSTAASPALDPDAVLQPGKVYF 79

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           ILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE A+GGE+W+CT AGKSRQWR
Sbjct: 80  ILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCETAEGGEEWKCTAAGKSRQWR 139

Query: 123 PLLDTIREKPGNNCGRIDSDLER 146
           PLLDTI+EKP N+C RI+SDLER
Sbjct: 140 PLLDTIKEKPANSCERIESDLER 162

[Close]

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-46
Identity = 99/142 (69.72%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           +VHLNGHVQHFHSPITA QV G  PPPAEYFI TAAQLVS A SPALNPD +LQPGKVYF
Sbjct: 21  LVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVSLAVSPALNPDAILQPGKVYF 80

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           +LP STLHPDVS +DL+SIAR+LTAAAKSA +    PPC A  GG DW+   A KSRQW+
Sbjct: 81  LLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP---PPCVAVGGGNDWKAPVAAKSRQWK 140

Query: 123 PLLDTIREKPGNNCGRIDSDLE 145
           P LDTI+EK  N   + +SDL+
Sbjct: 141 PFLDTIQEKAVN---KSESDLQ 156

[Close]

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL
Match: A0A6A2Y6W9 (OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111542pilonHSYRG00100 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 70/142 (49.30%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
           V+H NGHV+ F  PIT  +V G  P   + ++CTAAQL+S    P LNPD  LQPG +YF
Sbjct: 22  VIHFNGHVEDFEHPITVSEVIGNLP---KQYLCTAAQLLSAGTKP-LNPDAPLQPGHLYF 81

Query: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
           +LP STL  DVS  D+AS+ +RLTA AKS   S    P  A +GG     T  G +R W+
Sbjct: 82  VLPFSTLQDDVSPLDMASVVKRLTARAKSHDGSRRTGPLSAVNGG----LTRRGTTRSWK 141

Query: 123 PLLDTIREKPGNNCGRIDSDLE 145
           P+LDTIRE   +  GR DSD++
Sbjct: 142 PILDTIREM--SFTGRSDSDIQ 153

[Close]

BLAST of CsaV3_2G008660 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 33/123 (26.83%), Postives = 60/123 (48.78%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQV-------AGRPPPPAEYFICTAAQLVSTAASPALNPDVVL 62
           +V +NG ++ +  P+ A QV       +      + YF+C +  L      PA+  D +L
Sbjct: 21  IVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIPAIESDEIL 80

Query: 63  QPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAA-------KSGSLPPCEAADGGE 112
           Q  ++YF+LP+S     +S +D+A++A + + A + AA       +SG + P    +   
Sbjct: 81  QANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGKKNRRRRSGRISPVVTLNQAN 140

[Close]

BLAST of CsaV3_2G008660 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 28/105 (26.67%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 3   VVHLNGHVQHFHSPITARQV----------AGRPPPPAEYFICTAAQLVSTAASPALNPD 62
           +V +NG ++ ++ P+ A QV          +     P+ YFIC +  L      PA+  +
Sbjct: 20  IVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSYFICDSDSLYYDDFIPAIKSE 79

Query: 63  VVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGS 98
             LQ  ++YF+LP+S     ++ +D+A++A + + A +++ K  S
Sbjct: 80  EPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNSVKKES 124

The following BLAST results are available for this feature:

BLAST of CsaV3_2G008660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651677.1	2.6e-76	100.00	hypothetical protein Csa_021330 [Cucumis sativus]	[more]
XP_011650123.1	5.0e-75	100.00	uncharacterized protein LOC105434722 [Cucumis sativus]	[more]
XP_008460258.1	1.9e-66	88.81	PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF...	[more]
KAG7029841.1	2.8e-46	69.72	hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022996489.1	4.9e-46	69.72	uncharacterized protein LOC111491721 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G008660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G008660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHC0	2.4e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1	[more]
A0A5D3CAJ8	9.2e-67	88.81	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CC70	9.2e-67	88.81	uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=...	[more]
A0A6J1K8V3	2.4e-46	69.72	uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721...	[more]
A0A6A2Y6W9	1.1e-24	49.30	OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=10633...	[more]

BLAST of CsaV3_2G008660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76600.1	4.0e-06	26.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G21010.1	1.5e-05	26.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 2..130 e-value: 2.8E-21 score: 76.8
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 3..135
None	No IPR available	PANTHER	PTHR33052:SF2	OS06G0700300 PROTEIN	coord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G008660.1	CsaV3_2G008660.1	mRNA