CsaV3_2G008630 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G008630
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ABC transporter C family member 2
Location	chr2: 4980322 .. 4980835 (+)
RNA-Seq Expression	CsaV3_2G008630
Synteny	CsaV3_2G008630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTAGTGTTAACCTTGCTAGAGCACTTCTTCGACGATCAAAAATACTTGTTCTTGATGAAGCGACTGCAGCGGTTGATGTTCAAACAGATGCCTTAATTCAGAAAACCATTAAGGAAGAGTTTAAATCTTGTACAATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTAAAGTTTTTCTTACTTTCAATAATATCATTCAATCTATGCACTTAATTACCCATATTAACATTCTAGTTCTATTTGAGTTGCAGTATATCTTTTTCTATCTTTCTACTACAAGCATTAGTCTCTTATTGTTTGCTTTTTTACATAATAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

mRNA sequence

AATTTTAGTGTTAACCTTGCTAGAGCACTTCTTCGACGATCAAAAATACTTGTTCTTGATGAAGCGACTGCAGCGGTTGATGTTCAAACAGATGCCTTAATTCAGAAAACCATTAAGGAAGAGTTTAAATCTTGTACAATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

Coding sequence (CDS)

AATTTTAGTGTTAACCTTGCTAGAGCACTTCTTCGACGATCAAAAATACTTGTTCTTGATGAAGCGACTGCAGCGGTTGATGTTCAAACAGATGCCTTAATTCAGAAAACCATTAAGGAAGAGTTTAAATCTTGTACAATGCTCACTATTGCACACAGATTAAATACCATCATAGACTGTGATCGAATTCTTCTACTTGAATTTGGTCAGGTGTTGGAGTACGACACTCCAAAACAACTTTTATCGAATGAAGAAAGTGATTTTTCAAAGATGGTTCAAAGTACAGGAGTTGCCAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTCAAGACAACATAGGAATAAGCAAGGAAATGTGA

Protein sequence

NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM*

Homology

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BLAST of CsaV3_2G008630 vs. NCBI nr
Match: KAE8651675.1 (hypothetical protein Csa_021219, partial [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC 60
           NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC
Sbjct: 1   NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC 60

Query: 61  DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM 120
           DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM
Sbjct: 61  DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM 120

[Close]

BLAST of CsaV3_2G008630 vs. NCBI nr
Match: KAA0038845.1 (ABC transporter C family member 2 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.6e-50
Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
           NFSV      +LARALLRRSKILVLDEATAAVDVQTDALIQK+IKEEFKSCTMLTIAHRL
Sbjct: 564 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKSIKEEFKSCTMLTIAHRL 623

Query: 61  NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNI 120
           NTIIDCDRILLLEFGQVLEYDTP+QLLSN+ES FSK+VQSTGV NAQYLHKLVFEGQDNI
Sbjct: 624 NTIIDCDRILLLEFGQVLEYDTPEQLLSNQESGFSKIVQSTGVTNAQYLHKLVFEGQDNI 683

[Close]

BLAST of CsaV3_2G008630 vs. NCBI nr
Match: XP_022146679.1 (ABC transporter C family member 2-like [Momordica charantia] >XP_022146680.1 ABC transporter C family member 2-like [Momordica charantia] >XP_022146681.1 ABC transporter C family member 2-like [Momordica charantia])

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1375 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1434

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 120
            NTIIDCDRILLLE G+VLEY+TP++LLSNE+S FSKMVQSTG ANAQYL  LV   EG+ 
Sbjct: 1435 NTIIDCDRILLLEAGRVLEYNTPEELLSNEKSSFSKMVQSTGAANAQYLRSLVLGGEGEK 1494

[Close]

BLAST of CsaV3_2G008630 vs. NCBI nr
Match: XP_022762661.1 (ABC transporter C family member 2-like [Durio zibethinus])

HSP 1 Score: 177.2 bits (448), Expect = 8.7e-41
Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1375 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1434

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 116
            NTIIDCDRILLL+ G+VLEYDTP++LLSNEES FSKMVQSTG ANAQYL  L    EG+D
Sbjct: 1435 NTIIDCDRILLLDSGRVLEYDTPEELLSNEESAFSKMVQSTGAANAQYLRSLALGGEGED 1494

[Close]

BLAST of CsaV3_2G008630 vs. NCBI nr
Match: XP_011656526.1 (ABC transporter C family member 2 [Cucumis sativus] >XP_031743698.1 ABC transporter C family member 2 [Cucumis sativus] >KAE8646615.1 hypothetical protein Csa_004851 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 8.7e-41
Identity = 95/128 (74.22%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFS+      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1377 NFSIGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1436

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 120
            NTIIDCDRIL+LE G+VLEY+TPK+LLS EES FSKM+QSTG ANAQYL  LVF  EG+ 
Sbjct: 1437 NTIIDCDRILVLEAGRVLEYNTPKELLSAEESAFSKMIQSTGAANAQYLRSLVFETEGEK 1496

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.9e-39
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRL
Sbjct: 1371 NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRL 1430

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDN 114
            NTIIDCD+IL+L  GQVLEYD+P++LLS + S F +MV STG ANAQYL  LVFE ++N
Sbjct: 1431 NTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNLVFERREN 1489

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-38
Identity = 85/117 (72.65%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +L+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1378 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1437

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  LV + +
Sbjct: 1438 NTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSLVLDNK 1494

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.3e-38
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRL
Sbjct: 1373 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRL 1432

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD++L+L+ G+V E+ +P+ LLSN ES FSKMVQSTG ANA+YL  +  E +
Sbjct: 1433 NTIIDCDKVLVLDSGKVQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSITLENK 1489

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-37
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKIL LDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRL
Sbjct: 1371 NFSVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRL 1430

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDN 114
            NTIIDCD+IL+L  GQVLEYD+P++LLS + S F KMV STG  N QYL  LVFE + N
Sbjct: 1431 NTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFKMVHSTGPENGQYLSNLVFERRGN 1489

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot
Match: Q8ST87 (ABC transporter C family member 10 OS=Dictyostelium discoideum OX=44689 GN=abcC10 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 67/126 (53.17%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1    NFSVN------LARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV       LARALLR+ KILVLDEATA+VD Q+D+LIQ TI+ +F +CT+LTIAHRL
Sbjct: 1189 NFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRL 1248

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNI 120
            NTI+D DRI++L+ G++ E+D P  LL N+    + +V  TG  NA YL KL    ++ I
Sbjct: 1249 NTIMDSDRIMVLDAGKISEFDEPWTLLQNQNGLLTWLVDETGPQNAIYLRKLAEAKKNGI 1308

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL
Match: A0A0A0LGU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060460 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC 60
           NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC
Sbjct: 33  NFSVNLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRLNTIIDC 92

Query: 61  DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM 120
           DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM
Sbjct: 93  DRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNIGISKEM 152

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL
Match: A0A5A7TBT5 (ABC transporter C family member 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold47G00050 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
           NFSV      +LARALLRRSKILVLDEATAAVDVQTDALIQK+IKEEFKSCTMLTIAHRL
Sbjct: 564 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKSIKEEFKSCTMLTIAHRL 623

Query: 61  NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDNI 120
           NTIIDCDRILLLEFGQVLEYDTP+QLLSN+ES FSK+VQSTGV NAQYLHKLVFEGQDNI
Sbjct: 624 NTIIDCDRILLLEFGQVLEYDTPEQLLSNQESGFSKIVQSTGVTNAQYLHKLVFEGQDNI 683

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL
Match: A0A6J1CYS4 (ABC transporter C family member 2-like OS=Momordica charantia OX=3673 GN=LOC111015826 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1375 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1434

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 120
            NTIIDCDRILLLE G+VLEY+TP++LLSNE+S FSKMVQSTG ANAQYL  LV   EG+ 
Sbjct: 1435 NTIIDCDRILLLEAGRVLEYNTPEELLSNEKSSFSKMVQSTGAANAQYLRSLVLGGEGEK 1494

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL
Match: A0A0A0KAW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040630 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.2e-41
Identity = 95/128 (74.22%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
           NFS+      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 715 NFSIGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 774

Query: 61  NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 120
           NTIIDCDRIL+LE G+VLEY+TPK+LLS EES FSKM+QSTG ANAQYL  LVF  EG+ 
Sbjct: 775 NTIIDCDRILVLEAGRVLEYNTPKELLSAEESAFSKMIQSTGAANAQYLRSLVFETEGEK 834

[Close]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL
Match: A0A6P6AD05 (ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308549 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.2e-41
Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1375 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1434

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVF--EGQD 116
            NTIIDCDRILLL+ G+VLEYDTP++LLSNEES FSKMVQSTG ANAQYL  L    EG+D
Sbjct: 1435 NTIIDCDRILLLDSGRVLEYDTPEELLSNEESAFSKMVQSTGAANAQYLRSLALGGEGED 1494

[Close]

BLAST of CsaV3_2G008630 vs. TAIR 10
Match: AT1G30410.1 (multidrug resistance-associated protein 13 )

HSP 1 Score: 161.8 bits (408), Expect = 3.5e-40
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRL
Sbjct: 1344 NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRL 1403

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQDN 114
            NTIIDCD+IL+L  GQVLEYD+P++LLS + S F +MV STG ANAQYL  LVFE ++N
Sbjct: 1404 NTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNLVFERREN 1462

[Close]

BLAST of CsaV3_2G008630 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 85/117 (72.65%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +L+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1378 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1437

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  LV + +
Sbjct: 1438 NTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSLVLDNK 1494

[Close]

BLAST of CsaV3_2G008630 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 85/117 (72.65%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +L+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRL
Sbjct: 1378 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1437

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD+IL+L+ G+V E+ +P+ LLSNE S FSKMVQSTG ANA+YL  LV + +
Sbjct: 1438 NTIIDCDKILVLDSGRVQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSLVLDNK 1494

[Close]

BLAST of CsaV3_2G008630 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 157.5 bits (397), Expect = 6.6e-39
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRL
Sbjct: 1373 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRL 1432

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD++L+L+ G+V E+ +P+ LLSN ES FSKMVQSTG ANA+YL  +  E +
Sbjct: 1433 NTIIDCDKVLVLDSGKVQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSITLENK 1489

[Close]

BLAST of CsaV3_2G008630 vs. TAIR 10
Match: AT1G30400.2 (multidrug resistance-associated protein 1 )

HSP 1 Score: 157.5 bits (397), Expect = 6.6e-39
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1    NFSV------NLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLTIAHRL 60
            NFSV      +LARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRL
Sbjct: 1373 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRL 1432

Query: 61   NTIIDCDRILLLEFGQVLEYDTPKQLLSNEESDFSKMVQSTGVANAQYLHKLVFEGQ 112
            NTIIDCD++L+L+ G+V E+ +P+ LLSN ES FSKMVQSTG ANA+YL  +  E +
Sbjct: 1433 NTIIDCDKVLVLDSGKVQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSITLENK 1489

The following BLAST results are available for this feature:

BLAST of CsaV3_2G008630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651675.1	3.9e-57	100.00	hypothetical protein Csa_021219, partial [Cucumis sativus]	[more]
KAA0038845.1	4.6e-50	88.10	ABC transporter C family member 2 [Cucumis melo var. makuwa]	[more]
XP_022146679.1	2.3e-41	77.17	ABC transporter C family member 2-like [Momordica charantia] >XP_022146680.1 ABC...	[more]
XP_022762661.1	8.7e-41	78.86	ABC transporter C family member 2-like [Durio zibethinus]	[more]
XP_011656526.1	8.7e-41	74.22	ABC transporter C family member 2 [Cucumis sativus] >XP_031743698.1 ABC transpor...	[more]

BLAST of CsaV3_2G008630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8H0	4.9e-39	72.27	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q42093	2.5e-38	72.65	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8G9	9.3e-38	70.94	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q9C8H1	2.7e-37	70.59	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]
Q8ST87	1.3e-26	53.17	ABC transporter C family member 10 OS=Dictyostelium discoideum OX=44689 GN=abcC1...	[more]

BLAST of CsaV3_2G008630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGU8	1.9e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060460 PE=4 SV=1	[more]
A0A5A7TBT5	2.2e-50	88.10	ABC transporter C family member 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1CYS4	1.1e-41	77.17	ABC transporter C family member 2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KAW3	4.2e-41	74.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040630 PE=4 SV=1	[more]
A0A6P6AD05	4.2e-41	78.86	ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308...	[more]

BLAST of CsaV3_2G008630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30410.1	3.5e-40	72.27	multidrug resistance-associated protein 13	[more]
AT2G34660.1	1.7e-39	72.65	multidrug resistance-associated protein 2	[more]
AT2G34660.2	1.7e-39	72.65	multidrug resistance-associated protein 2	[more]
AT1G30400.1	6.6e-39	70.94	multidrug resistance-associated protein 1	[more]
AT1G30400.2	6.6e-39	70.94	multidrug resistance-associated protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..106 e-value: 4.4E-30 score: 107.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..85
None	No IPR available	PANTHER	PTHR24223:SF400	BNAC05G23280D PROTEIN	coord: 5..113
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 5..113
None	No IPR available	PANTHER	PTHR24223:SF379	ABC TRANSPORTER C FAMILY MEMBER 1	coord: 5..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G008630.1	CsaV3_2G008630.1	mRNA