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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTTCGCGACGTAACATCGGGAGAACTATTTTCCCGATGCCTGTTTGTTACGTCGGCGGAGTCCTACGTCCGACGTGATTCCATCGTCGACAAACTAGACATCAGGGGACGAGAATTTTCAACGCTTGATCTTTGTTCGTTGGGAATGGGTCTCTCAATGCAGGTTTCCCGACAATTATCCTAACGTGCAGGATTACATAGGGAGAACGTTTGTCGATGCCATTGTTTACCTTCGTCAACGTTGTCGTGTGTCGAAAAAACCCTGA mRNA sequence ATGTTTCGCGACGTAACATCGGGAGAACTATTTTCCCGATGCCTGTTTGTTACGTCGGCGGAGTCCTACGTCCGACGTGATTCCATCGTCGACAAACTAGACATCAGGGGACGAGAATTTTCAACGCTTGATCTTTGTTCGTTGGGAATGGGTCTCTCAATGCAGGATTACATAGGGAGAACGTTTGTCGATGCCATTGTTTACCTTCGTCAACGTTGTCGTGTGTCGAAAAAACCCTGA Coding sequence (CDS) ATGTTTCGCGACGTAACATCGGGAGAACTATTTTCCCGATGCCTGTTTGTTACGTCGGCGGAGTCCTACGTCCGACGTGATTCCATCGTCGACAAACTAGACATCAGGGGACGAGAATTTTCAACGCTTGATCTTTGTTCGTTGGGAATGGGTCTCTCAATGCAGGATTACATAGGGAGAACGTTTGTCGATGCCATTGTTTACCTTCGTCAACGTTGTCGTGTGTCGAAAAAACCCTGA Protein sequence MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGRTFVDAIVYLRQRCRVSKKP*
Homology
BLAST of CsaV3_2G008400 vs. NCBI nr
Match: KGN61140.1 (hypothetical protein Csa_021240 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 Query: 1 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR 60 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR Sbjct: 1 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR 60
Query: 61 TFVDAIVYLRQRCRVSKKP 80 TFVDAIVYLRQRCRVSKKP Sbjct: 61 TFVDAIVYLRQRCRVSKKP 79
BLAST of CsaV3_2G008400 vs. ExPASy TrEMBL
Match: A0A0A0LGS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059710 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.1e-37 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 Query: 1 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR 60 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR Sbjct: 1 MFRDVTSGELFSRCLFVTSAESYVRRDSIVDKLDIRGREFSTLDLCSLGMGLSMQDYIGR 60
Query: 61 TFVDAIVYLRQRCRVSKKP 80 TFVDAIVYLRQRCRVSKKP Sbjct: 61 TFVDAIVYLRQRCRVSKKP 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN61140.1 | 1.5e-36 | 100.00 | hypothetical protein Csa_021240 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LGS4 | 7.1e-37 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059710 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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