CsaV3_2G007590 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G007590
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UPF0057 membrane protein
Location	chr2: 3886823 .. 3887734 (+)
RNA-Seq Expression	CsaV3_2G007590
Synteny	CsaV3_2G007590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACGTGGAAGACAAACAATAATAAATGAAAAAAGAAGAAAAAAAATTGGGATTGAGACTTTAAAATTGTTATGATCAATAGATAACAAACCTAACAAACAGATTTTTCCATTAACTCTCTTCACTTCCACAAACCTCTCTCTTCAATCAAAAATGGTGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTAATTCCTCTTTCTTCTGCTTCTCCTTCTAATTTCCCCAAACTGACCTAAAACAACGACCGAAGAAACTTCTCTCCCTCTGCGATTAATCTAAATGATCTGACGATGTTGATCTGAAATAGATTTTTATTTTGATTATTCGCAGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTGGGTTACGTTCCGGGGATCATTTACGCAGTGTACGCCATTGCGTTCGTGGATCGTGACCAGTTCTTTGATGAGTACAGGCGTCCGCTGTATTCCTCGGTGTCGGCGGAATAGAACAAGTTTGAATTTCTTGATCTCTATGTGTTTTTAAGAACTTATGGTATGGATCAATAATTATTGCTGATTCTTAAGTAGTTTTCTCTGTTCTTTTCTGGATATTGGATTATTGGCTTTCTCATCATCTCTACTTAGATTTGTAAGGCTCTCTCTTTCTTTGATTGGATTGGATTTTGTTGAACAATTTGAATTAACACAATATGAAAAGTGGGCCATTTGATTATATATCTGTACTTATATGAGAACAAAAAAGAATTGTTTTCATTTGGGATTGGAAGTGTGGCTTAAGGGACTTTGAAATAAGATGTGAGTGTGAGTGTCGTAGAAAGTTAGAAGAATGGAGGAAGAACTGAAATGACTTTCGATAAACGAA

mRNA sequence

ATGGTGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTGGGTTACGTTCCGGGGATCATTTACGCAGTGTACGCCATTGCGTTCGTGGATCGTGACCAGTTCTTTGATGAGTACAGGCGTCCGCTGTATTCCTCGGTGTCGGCGGAATAG

Coding sequence (CDS)

ATGGTGAACGGTTGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTGGGTTACGTTCCGGGGATCATTTACGCAGTGTACGCCATTGCGTTCGTGGATCGTGACCAGTTCTTTGATGAGTACAGGCGTCCGCTGTATTCCTCGGTGTCGGCGGAATAG

Protein sequence

MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDRDQFFDEYRRPLYSSVSAE*

Homology

[Close]

BLAST of CsaV3_2G007590 vs. NCBI nr
Match: XP_011648896.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical protein Csa_021360 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 7.2e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSSVSAE 79
          DQFFDEYRRPLYSSVSAE
Sbjct: 61 DQFFDEYRRPLYSSVSAE 78

[Close]

BLAST of CsaV3_2G007590 vs. NCBI nr
Match: XP_008452728.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo] >KAA0056112.1 UPF0057 membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 4.6e-35
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSSVSAE 79
          DQFFDEYRRPLYSS SA+
Sbjct: 61 DQFFDEYRRPLYSSASAD 78

[Close]

BLAST of CsaV3_2G007590 vs. NCBI nr
Match: XP_022158160.1 (UPF0057 membrane protein At2g24040-like [Momordica charantia])

HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYVPGIIYA+YAI FVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSSVSA 78
          DQFFDEYRRPLY+ VSA
Sbjct: 61 DQFFDEYRRPLYAPVSA 77

[Close]

BLAST of CsaV3_2G007590 vs. NCBI nr
Match: XP_038890692.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI FVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSSVS 77
          DQFFDEYRRPLY+  S
Sbjct: 61 DQFFDEYRRPLYAPAS 76

[Close]

BLAST of CsaV3_2G007590 vs. NCBI nr
Match: XP_022946545.1 (UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF0057 membrane protein At2g24040-like [Cucurbita maxima] >XP_023523032.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >XP_023546587.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >KAG6599143.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030086.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSSVSA 78
          DQFFDEYRRPLYS  SA
Sbjct: 61 DQFFDEYRRPLYSQASA 77

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-26
Identity = 52/72 (72.22%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M + CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-25
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGYVPGIIYA+Y I F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYSS 75
          +++FDEYRRP+YS+
Sbjct: 61 EEYFDEYRRPIYSA 74

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.0e-18
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M +  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGY+PGIIYA+Y I F +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.7e-17
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 8  CC---EILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDRDQFF 67
          CC   EIL+AI++PPLGV L+FGCC++EFC+CL+LT+LGYVPGIIYAVY +  +D DQ+ 
Sbjct: 6  CCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQYQ 65

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 4  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAI 56
          G   C +ILIAI++PPLGV LKFG C  EF +CL+LT LGY+PGIIYA+YAI
Sbjct: 3  GTANCIDILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL
Match: A0A0A0LGN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSSVSAE 79
          DQFFDEYRRPLYSSVSAE
Sbjct: 61 DQFFDEYRRPLYSSVSAE 78

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL
Match: A0A5A7UJR3 (UPF0057 membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00760 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-35
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSSVSAE 79
          DQFFDEYRRPLYSS SA+
Sbjct: 61 DQFFDEYRRPLYSSASAD 78

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL
Match: A0A1S3BTY7 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-35
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSSVSAE 79
          DQFFDEYRRPLYSS SA+
Sbjct: 61 DQFFDEYRRPLYSSASAD 78

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL
Match: A0A6J1DV17 (UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111024708 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYVPGIIYA+YAI FVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSSVSA 78
          DQFFDEYRRPLY+ VSA
Sbjct: 61 DQFFDEYRRPLYAPVSA 77

[Close]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL
Match: A0A6J1KI35 (UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494032 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSSVSA 78
          DQFFDEYRRPLYS  SA
Sbjct: 61 DQFFDEYRRPLYSQASA 77

[Close]

BLAST of CsaV3_2G007590 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 133.3 bits (334), Expect = 8.7e-32
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M NGCEICCEI+IAILIPPLGVCL+ GCCT EF +CLILTLLGYVPGIIYA+YAI +VDR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSSVS 77
          DQFFDEYRRPL+ + S
Sbjct: 61 DQFFDEYRRPLFYAQS 76

[Close]

BLAST of CsaV3_2G007590 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-27
Identity = 52/72 (72.22%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M + CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of CsaV3_2G007590 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-26
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGYVPGIIYA+Y I F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYSS 75
          +++FDEYRRP+YS+
Sbjct: 61 EEYFDEYRRPIYSA 74

[Close]

BLAST of CsaV3_2G007590 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-26
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGYVPGIIYA+Y I F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYSS 75
          +++FDEYRRP+YS+
Sbjct: 61 EEYFDEYRRPIYSA 74

[Close]

BLAST of CsaV3_2G007590 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 90.9 bits (224), Expect = 5.0e-19
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60
          M +  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGY+PGIIYA+Y I F +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of CsaV3_2G007590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648896.1	7.2e-36	100.00	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical pr...	[more]
XP_008452728.1	4.6e-35	97.44	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo] >KAA0056112.1 UPF00...	[more]
XP_022158160.1	2.2e-32	92.21	UPF0057 membrane protein At2g24040-like [Momordica charantia]	[more]
XP_038890692.1	4.8e-32	90.79	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_022946545.1	6.3e-32	89.61	UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF...	[more]

BLAST of CsaV3_2G007590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82232	2.4e-26	72.22	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9SUI0	3.5e-25	68.92	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
Q9M095	7.0e-18	68.85	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	7.7e-17	65.08	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
A2Y075	1.4e-10	67.31	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of CsaV3_2G007590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGN1	3.5e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=3 SV=1	[more]
A0A5A7UJR3	2.3e-35	97.44	UPF0057 membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BTY7	2.3e-35	97.44	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=3 ...	[more]
A0A6J1DV17	1.0e-32	92.21	UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KI35	3.0e-32	89.61	UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]

BLAST of CsaV3_2G007590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	8.7e-32	81.58	Low temperature and salt responsive protein family	[more]
AT2G24040.1	1.7e-27	72.22	Low temperature and salt responsive protein family	[more]
AT4G30660.1	2.5e-26	68.92	Low temperature and salt responsive protein family	[more]
AT4G30660.2	2.5e-26	68.92	Low temperature and salt responsive protein family	[more]
AT4G30650.1	5.0e-19	68.85	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 8..55 e-value: 5.5E-16 score: 58.5
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..72
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF77	BNAC04G36850D PROTEIN	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G007590.1	CsaV3_2G007590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane