CsaV3_2G007110 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G007110
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr2: 3546393 .. 3548821 (-)
RNA-Seq Expression	CsaV3_2G007110
Synteny	CsaV3_2G007110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCTTCTAACTCAAATTATATATATATATATATGAAAGCAATAATTTATAAATAGAAAAAAGAATTGCAGAAGTGAAGATTTGAACCCTGGAGGGTAAGATATTATGACTATCAACTGCATACTGAATCTGAATCCCCCCGCCACTGCCGCCGCCATCGACACTCGAATTTTCCACCGCCGTAACCTCCGGCGAATCTAGACTCTCCCACGCATTTCATCAACTCTTCCTTCATCGAATTCATGGGACTCCGATGTCTATCTCTCTAATAACCCTCTGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGGAGATTCAGATGGAAAATGCGAGTTCCTGGTTGTAGCTCTCTGCCCTTGTTTAGTATGTTTGATTCTCCTTCTCATCGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTTCAACTTTAAGAACGATTGATTTCAGAAATCCCCCCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTTTTGCGATTTGAGTAATCCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGAGGAGGATAATCGTGAGTGTGATTCGACTGAAGTCAATCGCGTATGCAAGGTGATCGACGAATTGTTTGCATTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGGGTAAAATTGTCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATACGATGATGACAATTTTGGGGAAGACAAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCGTTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTTCTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTCGATAGTTTAGGGAGAGCAAAGCTTGGAAAAGAAGCTCTAACAATTTTTGAGAAGTTGCACGGTAGATTTACACCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGATTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCCATCAAGTTGTTTGAGGTCATGAAAGCCAAGGGACCATCTCCTGATGTCAAAAGCTACACGATTTTGGTTCGGGATTTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTCAGTATTTTGAAGAAATGCAAGGAGCAGGATGTCGACCTGATGCTGCAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACACGGTTTATGGGCTGCTGAAAGAAATGAAAGCAAACGGTTGCCCACCTGATGGGAAGACCTATAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGATGATGCTGTTCGGATATACAAGAAGATGATTGAGAATGGCATTAAACCAACAACCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGAGTCGCTGCTTGGGATGAGATGAAGTTAAAAGGGTGTTGCCCCGACGATAATTCGTATACTGTGTTTATAGGAGGGCTTATAAGTCTGGGACGTTGTGCGGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTATTAATGATGACCATAGTACTTAGAATCTTATTTAGTTAAACACCATTTTTCACTCAATCCATTATGTTCTATACTATTTACTGTATTTTAACATTAGATTGTATATTTTATTAGAATTTTAGCTTTGATTTCCTTCACATTAGTTTGATATTTTGGTGTTTCTGAGTTGGAAAAAAAAACCTCTCGTCTCTTCTTGCCCCCTTATTAATTCCCTTTTATGTGATACTAAAATATTAGTGAAGTTTATGAGTTTATTTCTTGAATCTTTAAAGATTTGTCCATTAAGGATGAAAGTGGTTGATTTCAAGTAGAGATGTTCACCGTGGAGCCG

mRNA sequence

ATGTCTATCTCTCTAATAACCCTCTGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGGAGATTCAGATGGAAAATGCGAGTTCCTGGTTGTAGCTCTCTGCCCTTGTTTAGTATGTTTGATTCTCCTTCTCATCGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTTCAACTTTAAGAACGATTGATTTCAGAAATCCCCCCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTTTTGCGATTTGAGTAATCCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGAGGAGGATAATCGTGAGTGTGATTCGACTGAAGTCAATCGCGTATGCAAGGTGATCGACGAATTGTTTGCATTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGGGTAAAATTGTCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATACGATGATGACAATTTTGGGGAAGACAAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCGTTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTTCTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTCGATAGTTTAGGGAGAGCAAAGCTTGGAAAAGAAGCTCTAACAATTTTTGAGAAGTTGCACGGTAGATTTACACCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGATTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCCATCAAGTTGTTTGAGGTCATGAAAGCCAAGGGACCATCTCCTGATGTCAAAAGCTACACGATTTTGGTTCGGGATTTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTCAGTATTTTGAAGAAATGCAAGGAGCAGGATGTCGACCTGATGCTGCAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACACGGTTTATGGGCTGCTGAAAGAAATGAAAGCAAACGGTTGCCCACCTGATGGGAAGACCTATAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGATGATGCTGTTCGGATATACAAGAAGATGATTGAGAATGGCATTAAACCAACAACCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGAGTCGCTGCTTGGGATGAGATGAAGTTAAAAGGGTGTTGCCCCGACGATAATTCGTATACTGTGTTTATAGGAGGGCTTATAAGTCTGGGACGTTGTGCGGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTATTAATGATGACCATAGTACTTAG

Coding sequence (CDS)

ATGTCTATCTCTCTAATAACCCTCTGTAGAGCTTCAAATTTCTCCGATTTCACGGCAGGCATTTACAATGCCGGATACTGGATTCAACGAACGATGGGACGACAAGGACGGAGATTCAGATGGAAAATGCGAGTTCCTGGTTGTAGCTCTCTGCCCTTGTTTAGTATGTTTGATTCTCCTTCTCATCGTAGTTTTCATTATTCTCATTGTCAAATTCCATTTATTTTGCCATACGCCTCTTCATTCTCTGTTCCTCAAGAAAAATTGTTGATTGTTTCAACTTTAAGAACGATTGATTTCAGAAATCCCCCCTTCCCTAGTCTTGATTTATTAGCTAGAGGCTTTTGCGATTTGAGTAATCCTGATTCTGATTCTGAAATTGAATGTGAGAAGAGTGAGGAGGAGGATAATCGTGAGTGTGATTCGACTGAAGTCAATCGCGTATGCAAGGTGATCGACGAATTGTTTGCATTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGGGTAAAATTGTCTCATGATCTGGTTTTGGAGGTCTTAGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATACGATGATGACAATTTTGGGGAAGACAAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCGTTTGTTTCAAAGCATTTGCAGCTGCAAAAGAGAGGAAGAAAGCTGTTGGAGTTCTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAACTGCTTGCTCGATAGTTTAGGGAGAGCAAAGCTTGGAAAAGAAGCTCTAACAATTTTTGAGAAGTTGCACGGTAGATTTACACCGAATTTACAAACATACACGGTTTTGTTGAATGGTTGGTGTCGAGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGATTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCCATCAAGTTGTTTGAGGTCATGAAAGCCAAGGGACCATCTCCTGATGTCAAAAGCTACACGATTTTGGTTCGGGATTTCTGCAAACAAGCCAAGATGAAAGAAGCGGTTCAGTATTTTGAAGAAATGCAAGGAGCAGGATGTCGACCTGATGCTGCAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACACGGTTTATGGGCTGCTGAAAGAAATGAAAGCAAACGGTTGCCCACCTGATGGGAAGACCTATAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCCGATGATGCTGTTCGGATATACAAGAAGATGATTGAGAATGGCATTAAACCAACAACCCACACGTACAGCATGATGATGAAATCCTACTTTCAAACAAGGAATTACGAAATGGGAGTCGCTGCTTGGGATGAGATGAAGTTAAAAGGGTGTTGCCCCGACGATAATTCGTATACTGTGTTTATAGGAGGGCTTATAAGTCTGGGACGTTGTGCGGAAGCTGGAAAGTATCTAGAGGAGATGATTGAGAAAGGAATGAAAGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTGGCTCAAAAGATGAAATTTTCTGGTAAATTTGAAGCTTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTTAAGAGAAGAAATCCTACAAACTTTATTAATGATGACCATAGTACTTAG

Protein sequence

MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSPSHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSNPDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNFINDDHST*

Homology

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BLAST of CsaV3_2G007110 vs. NCBI nr
Match: XP_004144748.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sativus] >KGN61002.1 hypothetical protein Csa_021233 [Cucumis sativus])

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE 180
           PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE
Sbjct: 121 PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE 180

Query: 181 VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL 240
           VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL
Sbjct: 181 VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL 240

Query: 241 LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI 300
           LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI
Sbjct: 241 LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI 300

Query: 301 FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC 360
           FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC
Sbjct: 301 FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC 360

Query: 361 KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY 420
           KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY
Sbjct: 361 KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY 420

Query: 421 TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE 480
           TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE
Sbjct: 421 TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE 480

Query: 481 NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE 540
           NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE
Sbjct: 481 NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE 540

Query: 541 AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE 600
           AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE
Sbjct: 541 AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE 600

Query: 601 MMRKRVKRRNPTNFINDDHST 622
           MMRKRVKRRNPTNFINDDHST
Sbjct: 601 MMRKRVKRRNPTNFINDDHST 621

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BLAST of CsaV3_2G007110 vs. NCBI nr
Match: KAA0048071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 582/624 (93.27%), Postives = 598/624 (95.83%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SLITL RASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMR+ GCSS+PLFSMFDS 
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLLIV   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGVKLSHD
Sbjct: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDNSYTVFIGGLISLG
Sbjct: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRRNPTNF N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFTNGDHS 623

[Close]

BLAST of CsaV3_2G007110 vs. NCBI nr
Match: XP_008453445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 578/624 (92.63%), Postives = 597/624 (95.67%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SLITL RASNFSDFTAGIYNAGY IQRTMGRQGRRFRWKMR+PGCSS+PLFSMFDS 
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLL V   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGV+L+HD
Sbjct: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILG+TRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDN YTVFIGGLISLG
Sbjct: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRRNPTNFIN DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINGDHS 623

[Close]

BLAST of CsaV3_2G007110 vs. NCBI nr
Match: XP_038890736.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 554/629 (88.08%), Postives = 582/629 (92.53%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS++L TL RASNFS F A IYNAG+ IQRT+GR+G+RFRW+M VPGCSSLPL  MFDS 
Sbjct: 1   MSLAL-TLGRASNFSPFAATIYNAGFRIQRTLGREGQRFRWQMHVPGCSSLPLSRMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFH S+CQIPF+LP+ASS SVPQEK+L   T RTI+FRN  FPSLDLLARGFCDL+N
Sbjct: 61  SHRSFHSSYCQIPFVLPHASSCSVPQEKVL-TPTSRTINFRNSTFPSLDLLARGFCDLNN 120

Query: 121 ----PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVK 180
                D DSEIEC KS E+D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECG+K
Sbjct: 121 EGSDSDYDSEIECGKS-EDDYRECNSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGIK 180

Query: 181 LSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLL 240
           LSHDLVLE+LAR+KQARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLL
Sbjct: 181 LSHDLVLEILARYKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLL 240

Query: 241 EEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAK 300
           EEMAEKELLTMETFT+CFKAFAAAKERKKA+G+ E+MKKYKYKVGVETINCLLDSLGRAK
Sbjct: 241 EEMAEKELLTMETFTICFKAFAAAKERKKAIGIFEMMKKYKYKVGVETINCLLDSLGRAK 300

Query: 301 LGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNT 360
           LGKEAL +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNT
Sbjct: 301 LGKEALAVFEKLRGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNT 360

Query: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAG 420
           MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQG G
Sbjct: 361 MLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGVG 420

Query: 421 CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAV 480
           CRPDA IYTCLITGFGNQKR+D VYGLLKEMK NGCPPDGKTYNALIKLMTNKRMPDDAV
Sbjct: 421 CRPDAGIYTCLITGFGNQKRLDMVYGLLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAV 480

Query: 481 RIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGL 540
           RIYKKMIENGI+PT HTY+MMMKSYFQTRNYEMGVA WDEMK KGCCPDDNSYTVFIGGL
Sbjct: 481 RIYKKMIENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGL 540

Query: 541 ISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600
           IS GRC+EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS
Sbjct: 541 ISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS 600

Query: 601 NVIARWAEMMRKRVKRRNPTNFINDDHST 622
           NVIARWAEMMRKRVKRRNPTN IN DHST
Sbjct: 601 NVIARWAEMMRKRVKRRNPTNIINGDHST 626

[Close]

BLAST of CsaV3_2G007110 vs. NCBI nr
Match: XP_022937612.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1049.3 bits (2712), Expect = 1.3e-302
Identity = 525/624 (84.13%), Postives = 557/624 (89.26%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SL T  R SNFS F   I NA   I+R++GR+GR FR KMRVP CSSLPL  MFDS 
Sbjct: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SH SFH S CQIPFILP+ASSF VPQE +LI ++ RTI+FRNPPFP  DLL RGFCD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 PDSDSEIECEKSEEEDNRECDS----TEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
             SDSEIECE SE++D RE DS     EV+RVCKV+DELFALDRNMEAVLDECGV LSHD
Sbjct: 121 SHSDSEIECEISEDDD-RESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVL VL RFKQARKPAFRFFCWAA KPGF+HDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFK+FAAAKER+KA+G+ ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           A  +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE FKPDIVAHNTMLEG
Sbjct: 301 AQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQ AGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
             IYTCLITGFGNQ+RMD +YG+LKEMK NGCPPDGKTYN+LIKLMTN+RMPDDA RIY 
Sbjct: 421 TGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYN 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIE+GIKPT HTY+MMMKSYFQTRNYEMGV  WDEMK KGCCPDDNSYTVFIGGLIS G
Sbjct: 481 KMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC+EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEASNVIA
Sbjct: 541 RCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRR PTN +N DHS
Sbjct: 601 RWAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 1.7e-204
Identity = 354/526 (67.30%), Postives = 422/526 (80.23%), Query Frame = 0


Query: 100 FRNPPFP--SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST---- 159
           +R  P P  S+ LL      RGF   S+  SD      E EC+  EE      +S+    
Sbjct: 70  YRQIPLPHSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPE 129

Query: 160 EVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKP 219
           EV RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 220 GFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAV 279
           GFAHDS+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAV
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAV 249

Query: 280 GVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWC 339
           G+ ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309

Query: 340 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 399
           RVRNL+EA +IWN MID+  KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+
Sbjct: 310 RVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 369

Query: 400 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 459
           SYTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429

Query: 460 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNY 519
           +  G PPDGKTYNALIKLM N++MP+ A RIY KMI+N I+P+ HT++M+MKSYF  RNY
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489

Query: 520 EMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 579
           EMG A W+EM  KG CPDDNSYTV I GLI  G+  EA +YLEEM++KGMK P +DYNKF
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549

Query: 580 AADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           AADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 3.0e-204
Identity = 355/525 (67.62%), Postives = 420/525 (80.00%), Query Frame = 0


Query: 100 FRNPPFP-SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST----E 159
           +R  P P S+ LL      RGF   S+  SD      E EC+  EE      +S+    E
Sbjct: 70  YRQIPLPHSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEE 129

Query: 160 VNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPG 219
           V RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ G
Sbjct: 130 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 189

Query: 220 FAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVG 279
           FAHDS+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAVG
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVG 249

Query: 280 VLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCR 339
           + ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWCR
Sbjct: 250 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 309

Query: 340 VRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKS 399
           VRNL+EA +IWN MID   KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+S
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369

Query: 400 YTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMK 459
           YTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM+
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429

Query: 460 ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYE 519
             G PPDGKTYNALIKLM N++MP+   RIY KMI+N I+P+ HT++M+MKSYF  RNYE
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489

Query: 520 MGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFA 579
           MG A WDEM  KG CPDDNSYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFA
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549

Query: 580 ADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           ADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 ADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 3.3e-203
Identity = 354/526 (67.30%), Postives = 419/526 (79.66%), Query Frame = 0


Query: 100 FRNPPFP--SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST---- 159
           +R  P P  S+ LL      RGF   S+  SD      E EC+  EE      +S+    
Sbjct: 70  YRQIPLPHSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPE 129

Query: 160 EVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKP 219
           EV RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 220 GFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAV 279
           GFAH S+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAV
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAV 249

Query: 280 GVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWC 339
           G+ ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309

Query: 340 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 399
           RVRNL+EA +IWN MID   KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+
Sbjct: 310 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369

Query: 400 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 459
           SYTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429

Query: 460 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNY 519
           +  G PPDGKTYNALIKLM N++MP+   RIY KMI+N I+P+ HT++M+MKSYF  RNY
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489

Query: 520 EMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 579
           EMG A WDEM  KG CPDDNSYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKF
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549

Query: 580 AADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           AADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.2e-65
Identity = 130/443 (29.35%), Postives = 241/443 (54.40%), Query Frame = 0


Query: 142 STEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 201
           S +  R+CK++ +    D  +E +L+E  VKLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 202 KPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKK 261
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 262 AVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKL-HGRFTPNLQTYTVLLN 321
           A+G    M+++ +K+     N +LD+L +++   +A  +F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 322 GWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 381
           GW +  NL+   ++  +M DE F+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 382 DVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLL 441
               +  L+     + K+ +A+++FE  + +G   +A  Y  L+  +   +RM+  Y  +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 442 KEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQT 501
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     +PT  TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 502 RNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDY 561
              +M +  WDEMK KG  P  + ++  I  L    +  EA +Y  EM++ G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 562 NKFAADFSRAGRPDILEELAQKM 584
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.6e-64
Identity = 149/452 (32.96%), Postives = 234/452 (51.77%), Query Frame = 0


Query: 130 EKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQAR 189
           EK E+E      + EV ++ +++    +    +E  L+E G+ L   L++ VL+R   A 
Sbjct: 57  EKHEDE-----FAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAG 116

Query: 190 KPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEM--AEKELLTMETFT 249
              +RFF WA ++PG+ H  +   +M+ IL K RQF  +  L+EEM     EL+  E F 
Sbjct: 117 NLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV 176

Query: 250 VCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR 309
           V  + FA+A   KKAV VL+ M KY  +       CLLD+L +    KEA  +FE +  +
Sbjct: 177 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 236

Query: 310 FTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAI 369
           F PNL+ +T LL GWCR   LMEA ++  QM +   +PDIV    +L G     K +DA 
Sbjct: 237 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 296

Query: 370 KLFEVMKAKGPSPDVKSYTILVRDFCK-QAKMKEAVQYFEEMQGAGCRPDAAIYTCLITG 429
            L   M+ +G  P+V  YT+L++  C+ + +M EA++ F EM+  GC  D   YT LI+G
Sbjct: 297 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 356

Query: 430 FGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPT 489
           F     +D  Y +L +M+  G  P   TY  ++     K   ++ + + +KM   G  P 
Sbjct: 357 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 416

Query: 490 THTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLE 549
              Y+++++   +    +  V  W+EM+  G  P  +++ + I G  S G   EA  + +
Sbjct: 417 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 476

Query: 550 EMIEKGM-KAPQLDYNKFAADFSRAGRPDILE 578
           EM+ +G+  APQ  Y    +  +   R D LE
Sbjct: 477 EMVSRGIFSAPQ--YGTLKSLLNNLVRDDKLE 501

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL
Match: A0A0A0LK05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1)

HSP 1 Score: 1265.8 bits (3274), Expect = 0.0e+00
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP
Sbjct: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN
Sbjct: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120

Query: 121 PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE 180
           PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE
Sbjct: 121 PDSDSEIECEKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLE 180

Query: 181 VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL 240
           VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL
Sbjct: 181 VLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKEL 240

Query: 241 LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI 300
           LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI
Sbjct: 241 LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTI 300

Query: 301 FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC 360
           FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC
Sbjct: 301 FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRC 360

Query: 361 KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY 420
           KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY
Sbjct: 361 KKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIY 420

Query: 421 TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE 480
           TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE
Sbjct: 421 TCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIE 480

Query: 481 NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE 540
           NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE
Sbjct: 481 NGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAE 540

Query: 541 AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE 600
           AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE
Sbjct: 541 AGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAE 600

Query: 601 MMRKRVKRRNPTNFINDDHST 622
           MMRKRVKRRNPTNFINDDHST
Sbjct: 601 MMRKRVKRRNPTNFINDDHST 621

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL
Match: A0A5D3BDC8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001090 PE=4 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 582/624 (93.27%), Postives = 598/624 (95.83%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SLITL RASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMR+ GCSS+PLFSMFDS 
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLLIV   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGVKLSHD
Sbjct: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDNSYTVFIGGLISLG
Sbjct: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRRNPTNF N DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFTNGDHS 623

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL
Match: A0A1S3BWC0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494147 PE=4 SV=1)

HSP 1 Score: 1169.5 bits (3024), Expect = 0.0e+00
Identity = 578/624 (92.63%), Postives = 597/624 (95.67%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SLITL RASNFSDFTAGIYNAGY IQRTMGRQGRRFRWKMR+PGCSS+PLFSMFDS 
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SHRSFH SHCQIPFILPYASSFSVPQEKLL V   RTIDFRNP FPSLDLLARG+CDL+N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 PDSDSEIECEKSEEEDNREC----DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
            DSDSEIECEKSE++D REC    DSTEV+RVCKVIDELFALDRNMEAVLDECGV+L+HD
Sbjct: 121 SDSDSEIECEKSEDDD-RECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVLEVLARFK+ARKPAFRFFCWAAQKPGFAHDSKTYN MMTILG+TRQFETMVSLLEEMA
Sbjct: 181 LVLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFKAFAAAKERKKAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEG
Sbjct: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQAKMKEAV+YFEEMQGAGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
            AIYTCLITGFGNQKRMD VYGLLKEM+ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK
Sbjct: 421 VAIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIENG +PT HTYSMMMKSYFQTRNYEMGVAAW+EMK KGCCPDDN YTVFIGGLISLG
Sbjct: 481 KMIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIA
Sbjct: 541 RCVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRRNPTNFIN DHS
Sbjct: 601 RWAEMMRKRVKRRNPTNFINGDHS 623

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL
Match: A0A6J1FBQ0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443968 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 6.4e-303
Identity = 525/624 (84.13%), Postives = 557/624 (89.26%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SL T  R SNFS F   I NA   I+R++GR+GR FR KMRVP CSSLPL  MFDS 
Sbjct: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SH SFH S CQIPFILP+ASSF VPQE +LI ++ RTI+FRNPPFP  DLL RGFCD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 PDSDSEIECEKSEEEDNRECDS----TEVNRVCKVIDELFALDRNMEAVLDECGVKLSHD 180
             SDSEIECE SE++D RE DS     EV+RVCKV+DELFALDRNMEAVLDECGV LSHD
Sbjct: 121 SHSDSEIECEISEDDD-RESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHD 180

Query: 181 LVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMA 240
           LVL VL RFKQARKPAFRFFCWAA KPGF+HDSKTYN MMTILGKTRQFETMVSLLEEMA
Sbjct: 181 LVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA 240

Query: 241 EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 300
           EKELLTMETFT+CFK+FAAAKER+KA+G+ ELMKKYKYKVGVETINCLLDSLGRAKLGKE
Sbjct: 241 EKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKE 300

Query: 301 ALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEG 360
           A  +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE FKPDIVAHNTMLEG
Sbjct: 301 AQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEG 360

Query: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPD 420
           LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQ AGCRPD
Sbjct: 361 LLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPD 420

Query: 421 AAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYK 480
             IYTCLITGFGNQ+RMD +YG+LKEMK NGCPPDGKTYN+LIKLMTN+RMPDDA RIY 
Sbjct: 421 TGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYN 480

Query: 481 KMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 540
           KMIE+GIKPT HTY+MMMKSYFQTRNYEMGV  WDEMK KGCCPDDNSYTVFIGGLIS G
Sbjct: 481 KMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHG 540

Query: 541 RCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIA 600
           RC+EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEASNVIA
Sbjct: 541 RCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIA 600

Query: 601 RWAEMMRKRVKRRNPTNFINDDHS 621
           RWAEMMRKRVKRR PTN +N DHS
Sbjct: 601 RWAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL
Match: A0A6J1HPJ9 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465475 PE=4 SV=1)

HSP 1 Score: 1047.7 bits (2708), Expect = 1.9e-302
Identity = 522/624 (83.65%), Postives = 556/624 (89.10%), Query Frame = 0


Query: 1   MSISLITLCRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRVPGCSSLPLFSMFDSP 60
           MS+SL T  R SNFS F A I NA   IQR++GR+GR FR KMRVP CSSLPL  MFDS 
Sbjct: 1   MSLSL-TFRRFSNFSAFPATISNAACQIQRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60

Query: 61  SHRSFHYSHCQIPFILPYASSFSVPQEKLLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN 120
           SH SFH S CQIPFILP+ASSF VPQE +LI  + RTI+FRNPPFP  DLL RGFCD  N
Sbjct: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIAMSSRTINFRNPPFPCFDLLVRGFCD-RN 120

Query: 121 PDSDSEIECEKSEEEDNR---ECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180
            DSDSEIE E  E++D       +S EV+RVCKV+DELFALDRNMEAVLDECG+ LSHDL
Sbjct: 121 SDSDSEIEREIREDDDRESESRANSIEVDRVCKVLDELFALDRNMEAVLDECGIILSHDL 180

Query: 181 VLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFKQARKPAFRFFCWAA KPGF+HDSKTYN MMTILGKTRQFETMVSLLEEMA 
Sbjct: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAA 240

Query: 241 KELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFT+CFK+FAAAKER+KA+G+ ELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDE FKPDIVAHNTMLEGL
Sbjct: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDA 420
           LRCKKRSDAIK+FEVMKAKGPSPDVKSYTILVRDFCKQ KMKEAV+YFEEMQ AGCRPDA
Sbjct: 361 LRCKKRSDAIKMFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQRAGCRPDA 420

Query: 421 AIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480
            IYTCLITGFGNQ+RMD +YG+LKEMK NGCPPDGKTYN+LIKLMTN+RMPDDAVRIY K
Sbjct: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAVRIYNK 480

Query: 481 MIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGR 540
           MIE+GIKPT HTY+MMMKSYFQTRNYEMGV  WDEMK KGCCPDDNSYTVFIGGLIS GR
Sbjct: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540

Query: 541 CAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIAR 600
           C+EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEASNVIAR
Sbjct: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600

Query: 601 WAEMMRKRVKRRNPTNFINDDHST 622
           WAEMMRKRVKRR PTN +N DHS+
Sbjct: 601 WAEMMRKRVKRRTPTNIVNADHSS 622

[Close]

BLAST of CsaV3_2G007110 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 713.8 bits (1841), Expect = 1.2e-205
Identity = 354/526 (67.30%), Postives = 422/526 (80.23%), Query Frame = 0


Query: 100 FRNPPFP--SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST---- 159
           +R  P P  S+ LL      RGF   S+  SD      E EC+  EE      +S+    
Sbjct: 70  YRQIPLPHSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPE 129

Query: 160 EVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKP 219
           EV RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 220 GFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAV 279
           GFAHDS+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAV
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAV 249

Query: 280 GVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWC 339
           G+ ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309

Query: 340 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 399
           RVRNL+EA +IWN MID+  KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+
Sbjct: 310 RVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 369

Query: 400 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 459
           SYTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429

Query: 460 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNY 519
           +  G PPDGKTYNALIKLM N++MP+ A RIY KMI+N I+P+ HT++M+MKSYF  RNY
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489

Query: 520 EMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 579
           EMG A W+EM  KG CPDDNSYTV I GLI  G+  EA +YLEEM++KGMK P +DYNKF
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549

Query: 580 AADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           AADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]

BLAST of CsaV3_2G007110 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 713.0 bits (1839), Expect = 2.1e-205
Identity = 355/525 (67.62%), Postives = 420/525 (80.00%), Query Frame = 0


Query: 100 FRNPPFP-SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST----E 159
           +R  P P S+ LL      RGF   S+  SD      E EC+  EE      +S+    E
Sbjct: 70  YRQIPLPHSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEE 129

Query: 160 VNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPG 219
           V RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ G
Sbjct: 130 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG 189

Query: 220 FAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVG 279
           FAHDS+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAVG
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVG 249

Query: 280 VLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCR 339
           + ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWCR
Sbjct: 250 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCR 309

Query: 340 VRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKS 399
           VRNL+EA +IWN MID   KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+S
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369

Query: 400 YTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMK 459
           YTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM+
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429

Query: 460 ANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYE 519
             G PPDGKTYNALIKLM N++MP+   RIY KMI+N I+P+ HT++M+MKSYF  RNYE
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489

Query: 520 MGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFA 579
           MG A WDEM  KG CPDDNSYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFA
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549

Query: 580 ADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           ADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 ADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]

BLAST of CsaV3_2G007110 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 709.5 bits (1830), Expect = 2.3e-204
Identity = 354/526 (67.30%), Postives = 419/526 (79.66%), Query Frame = 0


Query: 100 FRNPPFP--SLDLL-----ARGFCDLSNPDSDS-----EIECEKSEEEDNRECDST---- 159
           +R  P P  S+ LL      RGF   S+  SD      E EC+  EE      +S+    
Sbjct: 70  YRQIPLPHSSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPE 129

Query: 160 EVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKP 219
           EV RVCKVIDELFALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ 
Sbjct: 130 EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQ 189

Query: 220 GFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAV 279
           GFAH S+TYN+MM+IL KTRQFETMVS+LEEM  K LLTMETFT+  KAFAAAKERKKAV
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAV 249

Query: 280 GVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWC 339
           G+ ELMKKYK+K+GVETINCLLDSLGRAKLGKEA  +F+KL  RFTPN+ TYTVLLNGWC
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309

Query: 340 RVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVK 399
           RVRNL+EA +IWN MID   KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+
Sbjct: 310 RVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369

Query: 400 SYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM 459
           SYTI++RDFCKQ+ M+ A++YF++M  +G +PDAA+YTCLITGFG QK++DTVY LLKEM
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429

Query: 460 KANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNY 519
           +  G PPDGKTYNALIKLM N++MP+   RIY KMI+N I+P+ HT++M+MKSYF  RNY
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489

Query: 520 EMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 579
           EMG A WDEM  KG CPDDNSYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKF
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549

Query: 580 AADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 610
           AADF R G+P+I EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 550 AADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]

BLAST of CsaV3_2G007110 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 2.3e-66
Identity = 130/443 (29.35%), Postives = 241/443 (54.40%), Query Frame = 0


Query: 142 STEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 201
           S +  R+CK++ +    D  +E +L+E  VKLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 202 KPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKK 261
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 262 AVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKL-HGRFTPNLQTYTVLLN 321
           A+G    M+++ +K+     N +LD+L +++   +A  +F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 322 GWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 381
           GW +  NL+   ++  +M DE F+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 382 DVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLL 441
               +  L+     + K+ +A+++FE  + +G   +A  Y  L+  +   +RM+  Y  +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 442 KEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQT 501
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     +PT  TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 502 RNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDY 561
              +M +  WDEMK KG  P  + ++  I  L    +  EA +Y  EM++ G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 562 NKFAADFSRAGRPDILEELAQKM 584
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of CsaV3_2G007110 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 3.3e-65
Identity = 149/452 (32.96%), Postives = 234/452 (51.77%), Query Frame = 0


Query: 130 EKSEEEDNRECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQAR 189
           EK E+E      + EV ++ +++    +    +E  L+E G+ L   L++ VL+R   A 
Sbjct: 57  EKHEDE-----FAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAG 116

Query: 190 KPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEM--AEKELLTMETFT 249
              +RFF WA ++PG+ H  +   +M+ IL K RQF  +  L+EEM     EL+  E F 
Sbjct: 117 NLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV 176

Query: 250 VCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR 309
           V  + FA+A   KKAV VL+ M KY  +       CLLD+L +    KEA  +FE +  +
Sbjct: 177 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 236

Query: 310 FTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAI 369
           F PNL+ +T LL GWCR   LMEA ++  QM +   +PDIV    +L G     K +DA 
Sbjct: 237 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 296

Query: 370 KLFEVMKAKGPSPDVKSYTILVRDFCK-QAKMKEAVQYFEEMQGAGCRPDAAIYTCLITG 429
            L   M+ +G  P+V  YT+L++  C+ + +M EA++ F EM+  GC  D   YT LI+G
Sbjct: 297 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 356

Query: 430 FGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPT 489
           F     +D  Y +L +M+  G  P   TY  ++     K   ++ + + +KM   G  P 
Sbjct: 357 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 416

Query: 490 THTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLE 549
              Y+++++   +    +  V  W+EM+  G  P  +++ + I G  S G   EA  + +
Sbjct: 417 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 476

Query: 550 EMIEKGM-KAPQLDYNKFAADFSRAGRPDILE 578
           EM+ +G+  APQ  Y    +  +   R D LE
Sbjct: 477 EMVSRGIFSAPQ--YGTLKSLLNNLVRDDKLE 501

The following BLAST results are available for this feature:

BLAST of CsaV3_2G007110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144748.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sa...	[more]
KAA0048071.1	0.0e+00	93.27	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465...	[more]
XP_008453445.1	0.0e+00	92.63	PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-...	[more]
XP_038890736.1	0.0e+00	88.08	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benin...	[more]
XP_022937612.1	1.3e-302	84.13	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucur...	[more]

BLAST of CsaV3_2G007110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZP3	1.7e-204	67.30	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
Q9LEQ7	3.0e-204	67.62	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]
Q3EAF8	3.3e-203	67.30	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
Q9C9A2	3.2e-65	29.35	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
P0C8A0	4.6e-64	32.96	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_2G007110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK05	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1	[more]
A0A5D3BDC8	0.0e+00	93.27	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BWC0	0.0e+00	92.63	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]
A0A6J1FBQ0	6.4e-303	84.13	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]
A0A6J1HPJ9	1.9e-302	83.65	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]

BLAST of CsaV3_2G007110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62470.1	1.2e-205	67.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14820.1	2.1e-205	67.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	2.3e-204	67.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	2.3e-66	29.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49730.1	3.3e-65	32.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 307..450 e-value: 5.4E-38 score: 133.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 462..616 e-value: 1.6E-23 score: 85.6 coord: 157..306 e-value: 4.7E-17 score: 64.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 454..486 e-value: 3.3E-8 score: 31.2 coord: 211..238 e-value: 3.3E-5 score: 21.8 coord: 348..382 e-value: 8.3E-5 score: 20.5 coord: 314..347 e-value: 6.2E-7 score: 27.2 coord: 419..451 e-value: 1.6E-7 score: 29.0 coord: 488..521 e-value: 2.7E-8 score: 31.5 coord: 384..417 e-value: 8.0E-7 score: 26.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 281..305 e-value: 0.23 score: 11.8 coord: 211..238 e-value: 4.0E-4 score: 20.4 coord: 314..342 e-value: 0.0017 score: 18.4 coord: 524..552 e-value: 0.0032 score: 17.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 345..394 e-value: 2.0E-13 score: 50.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 439..497 e-value: 1.7E-11 score: 44.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 451..485 score: 12.232868
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..345 score: 11.114816
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..415 score: 12.320559
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 416..450 score: 11.049048
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 346..380 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 208..242 score: 9.733692
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 521..555 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 486..520 score: 10.369448
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 38..613
None	No IPR available	PANTHER	PTHR47942:SF48	OS05G0355200 PROTEIN	coord: 38..613
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 295..510

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G007110.1	CsaV3_2G007110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding