
CsaV3_2G006980 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTGGTTTTAAAAAAACAATTTAAAAGAAATTATAATTTGATTTTCTGTGCTATAAATATCGCCGGTGGTTTGAACTCTGTATTTACCAAACAAACAGCCTACGACGCTGAGAATTTGGAAGCCTTCATCGGAGATATCGTCAGATGGGTGAAGTCTCGGAACGTGAGAGGAAGATCGTTGTGGCGGTGGATGAAGGGGAGGAGAGCCTGTACGCGCTGTCATGGTGTTTGAAGAATGTAGTTTTTCAAAATTCCAAAGATACCCTCATCCTTCTCTACGCTCGCCCTCCTCGTCCCATTTACACCGCCATGGATGGCACAGGTTCCTCATTTTTCTATTTTACTTTAATTTATATATATATACTTCATGAATTATTTAATTACTCTTTACTTTAGGGGTGTCGATTTTATCGTCTACTTAATTTTTTTTTTTAAAAAAAAATCAATCATTTGTTTTTGCTTTTATTTCTAAAAATCAAGCTTATTTCTTTTCCTTTTCCTATAATGATTTGCATATGCATTTTTAAAAAACAAATGCAAGCTTTGAAAGGTTGCTTTAATTTCCTCAGTTTTCAAAATGTGGGTTATAAGTTTCTTTAAGACAGGATTAGTTTTAGAAAACAGAAAGACAAATTAAAGTAAAATGGTTAGTTTTAACAGTAACTTCATGCTTAGTTTTGATGAAGATTAAAGTAGAATTATTATAAATTGGAGATTAGATAATCATTAACCATTTAAATAATTATTAGATGGCGAATTTCAAACTTTGCATCCAACAGAAGAACTACCAGGTTCTTTTTTTTTTTCATTTTAAGTTTAAATTTGTGGTTTAAAGGGTTGTTTTGATAATTTGAGGTATTGATTTGAGACGTAGGGTATTTGTTCTCGGCGGATATAATGGCGACGTTGGATAGGTATAGTTACGACGTGGCAGAGGCCGTGGTGGAGAAGGCCAAAAGACTATGCGACCATCTAAACAATGTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTTTTTACTAGGAGTTTTAAGAAGTTTTATTTAACAAGGGGTTGTGAATGTCATTGAGAACAGGTGAAGGTGGAGACAAGAGTAGAAAGTGGAGATGCAAGGGATGTGATATGTCAAGTGGTGGAGAAATTGGGTGCTCACATCTTGGTAATGGGTAGCCATGGCTATGGTCCAATTAAAAGGTCACATATCAAATTCCTTTCTTTTGTCTTTTAAATACTCACTTTTGTCTAAATCAAAACACAAAGTTAAAGAAGTATATTAAAGCTAATTAGCACTAATATAATATGTTTAAAACTGTAAAATTTTGCAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGAGTGTGAAATGCCCTGTTTTGATTGTAAAGAAGCCTAAAAACTCATCACCATTATCTTCTTCTTCAAACTAAATTAATTACTTAATTTTTCTTTCACCTTATCATTTTGTATAAGCTACTTTTTTTCTTTTCTTTTTAAGTTATGATATTATATGTAAACTGTCTGTAATTATAAATTATCTTACCAATAAAGTTTTACTTCCTATCAACTCTCAATTATTAACAAGTTAGATACTTTAATTCATATTTTCGTATATTTTAGTATTTTGAGTTTTGTTATATCTTGGTTTTTCTCTGATTTATTTATAAGTTATTGAGGTAATGTCATTTTTAATTAAAATTAACTTCTGTTATTTGTTTAAAGTGTATGACACAAGGATCTGTTTTACAAAAAATGTACTTTTTTTTTTTTTTCAATTCTTGGTGGCTTTGATTTTCATTCCACTTTTTTGGACTCTACTTTGAAATTTCATAATGAGATAAGGATAGATTATTGCAATTATTGACATCTAACAATCAAAGTAACTATAAAAACAAGTTTTGAAAAGAAAAAGATTAGTGGGCATAAATCATTGACTTGCTTTGTCTACATCTTTTTAGTACAACAAGACATTTAATTTTAATTTTTTTTGGCTTTATGCACAAATCTTTAAAAAAATCCTCTAAGAAGGCTTTTAGGGTTAATGTTTCCATGAAAGAACTAAGAATTTGAGTATGAAATGTAACAGTGAAAAGGGAAAAGACAGGATGAATGAGAGAGAAGCAATTCAACTTCCAATGACAGAAGAGACAAAAGAGGGAGCTCAAAAAGTTCTTTCTTTATGTTATCATTTCAAACTGAACAAATTTTTATGTTATCATTTCAAACCGAACAAATTATTAAAT ATGGGTGAAGTCTCGGAACGTGAGAGGAAGATCGTTGTGGCGGTGGATGAAGGGGAGGAGAGCCTGTACGCGCTGTCATGGTGTTTGAAGAATGTAGTTTTTCAAAATTCCAAAGATACCCTCATCCTTCTCTACGCTCGCCCTCCTCGTCCCATTTACACCGCCATGGATGGCACAGATGGCGAATTTCAAACTTTGCATCCAACAGAAGAACTACCAGGGTATTTGTTCTCGGCGGATATAATGGCGACGTTGGATAGGTATAGTTACGACGTGGCAGAGGCCGTGGTGGAGAAGGCCAAAAGACTATGCGACCATCTAAACAATGTGAAGGTGGAGACAAGAGTAGAAAGTGGAGATGCAAGGGATGTGATATGTCAAGTGGTGGAGAAATTGGGTGCTCACATCTTGGTAATGGGTAGCCATGGCTATGGTCCAATTAAAAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGAGTGTGAAATGCCCTGTTTTGATTGTAAAGAAGCCTAAAAACTCATCACCATTATCTTCTTCTTCAAACTAA ATGGGTGAAGTCTCGGAACGTGAGAGGAAGATCGTTGTGGCGGTGGATGAAGGGGAGGAGAGCCTGTACGCGCTGTCATGGTGTTTGAAGAATGTAGTTTTTCAAAATTCCAAAGATACCCTCATCCTTCTCTACGCTCGCCCTCCTCGTCCCATTTACACCGCCATGGATGGCACAGATGGCGAATTTCAAACTTTGCATCCAACAGAAGAACTACCAGGGTATTTGTTCTCGGCGGATATAATGGCGACGTTGGATAGGTATAGTTACGACGTGGCAGAGGCCGTGGTGGAGAAGGCCAAAAGACTATGCGACCATCTAAACAATGTGAAGGTGGAGACAAGAGTAGAAAGTGGAGATGCAAGGGATGTGATATGTCAAGTGGTGGAGAAATTGGGTGCTCACATCTTGGTAATGGGTAGCCATGGCTATGGTCCAATTAAAAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGAGTGTGAAATGCCCTGTTTTGATTGTAAAGAAGCCTAAAAACTCATCACCATTATCTTCTTCTTCAAACTAA MGEVSERERKIVVAVDEGEESLYALSWCLKNVVFQNSKDTLILLYARPPRPIYTAMDGTDGEFQTLHPTEELPGYLFSADIMATLDRYSYDVAEAVVEKAKRLCDHLNNVKVETRVESGDARDVICQVVEKLGAHILVMGSHGYGPIKRAFIGSVSNHCAKSVKCPVLIVKKPKNSSPLSSSSN* Homology
BLAST of CsaV3_2G006980 vs. NCBI nr
Match: XP_004144758.1 (universal stress protein A-like protein isoform X1 [Cucumis sativus] >KGN60989.1 hypothetical protein Csa_021348 [Cucumis sativus]) HSP 1 Score: 370.9 bits (951), Expect = 6.3e-99 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. NCBI nr
Match: XP_038890239.1 (universal stress protein A-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 331.6 bits (849), Expect = 4.2e-87 Identity = 164/182 (90.11%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. NCBI nr
Match: XP_004144759.1 (universal stress protein A-like protein isoform X2 [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 7.2e-87 Identity = 170/184 (92.39%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. NCBI nr
Match: KAA0048059.1 (universal stress protein A-like protein isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82 Identity = 160/177 (90.40%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. NCBI nr
Match: XP_038890240.1 (universal stress protein A-like protein isoform X2 [Benincasa hispida]) HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78 Identity = 154/182 (84.62%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10 Identity = 44/157 (28.03%), Postives = 76/157 (48.41%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10 Identity = 50/169 (29.59%), Postives = 83/169 (49.11%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.4e-10 Identity = 51/170 (30.00%), Postives = 82/170 (48.24%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06 Identity = 28/81 (34.57%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy Swiss-Prot
Match: Q57997 (Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0577 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05 Identity = 29/104 (27.88%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy TrEMBL
Match: A0A0A0LIZ3 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033930 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy TrEMBL
Match: A0A5A7U3N2 (Universal stress protein A-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001280 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 8.9e-83 Identity = 160/177 (90.40%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy TrEMBL
Match: A0A6J1G3Q3 (universal stress protein PHOS32-like OS=Cucurbita moschata OX=3662 GN=LOC111450483 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.5e-71 Identity = 139/177 (78.53%), Postives = 154/177 (87.01%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy TrEMBL
Match: A0A6J1KHF4 (universal stress protein PHOS32-like OS=Cucurbita maxima OX=3661 GN=LOC111493887 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.7e-70 Identity = 138/177 (77.97%), Postives = 153/177 (86.44%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. ExPASy TrEMBL
Match: A0A6J1DUV9 (universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111023305 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 2.1e-68 Identity = 133/175 (76.00%), Postives = 150/175 (85.71%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. TAIR 10
Match: AT3G62550.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 3.0e-38 Identity = 78/167 (46.71%), Postives = 113/167 (67.66%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 7.8e-23 Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 101.7 bits (252), Expect = 6.6e-22 Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21 Identity = 62/178 (34.83%), Postives = 99/178 (55.62%), Query Frame = 0
BLAST of CsaV3_2G006980 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21 Identity = 55/175 (31.43%), Postives = 95/175 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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