CsaV3_2G004580 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCCTTAATCTTGTCGGACATATTTATTTAAATAAATAAATAAGGAAACAAACAATCAAGGGAACGCGAAAGCCCTATCTTTCTAGATTGTTCATCGTTTCCAGACTTTCGGTTCTGTTCTCAGATCGCTCTCAAGTTTCGTCGTCTCCTCAGGTACTCTCCATCTTCTTCTATCTCTTTCTATAACTTATTGTTGAACTTTTTTAGGTTTTCGAGAGAGACTGAGAGACGAAATGGAGCCGAAAGTGCCTAATGTCTTGTGTTTTTTGTTGCCGTAAATTCGAAATTTATGTTTGGTTTGAATTTTCTCTTTTGCTTGTAATTTCTGCTTCATAATACAGGGCTTTGTAATTGGTCATGTTAGGCTTCGTATTTGGATTAGAACGAGCTATAGTTGATCGTAAGCTTGAGGTCTATTGGGTTGGAGTTTGGTGCATTAGGTTTTTTTCCCCCTCTATTCTTCATTTTAGCAATTGGGGTCCTTTGCTTCTTTTTTTTTTGTTGTAATTTTTATATTTATATGATTGCTCGATAAGCTTGTAGTGTAGAACTCGAGTGGGAAACATCAATGGCGAACAAAATTATTTTTTTCGATCTTTACATCAAGATGATATTCACTGAAGTTTTATGAAGATGGAAAAAAGGCTCAACATGACATGCATTCTTTCTTTTGGAATCCAGACAAATGCTAGTCTCGTTAGTCCTTCTATTAACACTCTTCTCCAAAAAACAATTCTTTAAGCACTTGAAGTAACCTCTTTGTAATTTTTTTTTTGCTACAAGGACTTTTGATTCCATAATTTTCCAAATACGCGTTATTTTGCAATCAATGTTTGGGAACGGTGATTGTGTAGGTTTTTAGTTAAAAAAAAGTCCTCCTTTCCTTGCAAATCTTTATTTAACTTATCATAAATGTGTAGGTTTTTAGTAAGCTTGAAGTGCACTGGTTAAAAGAAAAACAAAAACAAAGAAAAGAATAAGCAAAAGAAAGCTCGAGGCTCACTAGTATGCAATAGTCCTCTAGGGCTGTGTAGTGCAGTTTTTTTTTTTTGTTTTTTAAATTGAATTTTTATTTTTTTATTTTTGAGGCACACACTGTATTTAAATAACAAATAAATCTATGTGTAGATGTACTTATACATAAACATAATAATCACCATTCAATGTATTGAAGACCATTCATTTGATTTTTGCATCACTCCTATACTTCCTGTGATGAAAGAGGTTTAGAAATTGTCATGGTTTTCCTTGTGAGATAGTTGAGATGCGTGTAAGCTGGCCTTGACACTCACGGATAAATAAAAAAAGGTTCAGAAAGGAATATGCTTTGCTGCAATATTGACTTTCTCATTATTTATATGTGAGTAGATCATGAAACAAGATTCAAATATGGAAGCAGATTCTGCTTTTCCTGAATGTGAGGAGAAGGAAGTACGTATGTCTGATGTAGAAAAAATGGAGGGGAATGTAGAAGAGTTCTCGACTGAACATGAAGGCAAAGAGAAAGAAGCAGTATCTTCGGCAGTTCAAGAAGATAGCAAAATGAAAGAAGGCTCCCCTACAGAACAAGTAGATGACATGAAAGAAGCTGTAACTGAAGTTGGGAGCGCCACTGAAGCTGGGAAGTCTGCTCAAAAGTCCGTCAAAGAAGGGTTGCGTAAAAAGAGAATTGTAAAAGTTCTGAAAGTAAAAAAGAAAATTATAAAGAAATCCCCAGCTAACAGTGTGTTGAAAAAAAAAGAAGCACAGGTTGAACAGGAAGATGAAAAAAGGAAAAAGAGGTTCCTGTAGCTCAAGAAGTGGAAGAAAGTCCTTTGACTCAGAACCCCACTGAAAGTTCCAATCCAGAGTCAAAGAAGAAGAGTAATAATGAAGTTTTAAAGGTGAAAAGGAAAATTGTAAAGAAATCTCCAGCCAGTAGTCAAAAGAAGACTAATAAGCTTCAGAATAGTCCTAAGGTGCAAGTCAGAAAGAAAGTGGAGAATAGTAAGAGTTCGTTGCAGGAGAATGGGGAAGTAAGTGAAAAAAAGGTAGAAGATACTGAGGAGCCTAACCAAAAGGAAAATGTTAAGAAAAGTGTATCAAAAGAGGAGCATATAGAAAAGGGAGAAGAGACTTCTGCTAGTAAAAAGCAAAATTCTGAGTCTAAAAATAGCGTCAAGGAAGGGAAGATCATAGAGAAGGCTGGTTCTTCAAGTAAAAGCATAAAGAATCAGAAAAAGAAAGAAAAGGTTAGAGAGCAAAGGAGTCGAAGGGAAGATAAAAATAAAGAAAATCTTGGTGGACTGATTTTCATGTGCAGTGCAAAAACGAAGCCAGATTGTTTTCACTACAACGTAATGGGTGTTTCTGCTGGCAAAATGGATGTTGTCTTGGCAATTAAGCCTGGCTTGAAGCTCTTTCTCTACGATTTTGATCTCAAGCTTCTGTATGGGATTTATAAAGCATCCTCTACCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTTCAAGTTTTGTTAGTTATTATAAACTACTCCAGAAGCTATTCTTTTCATCTGCCAAGGACATTGTCTCAATTCGAAAATTAAAATTTCAGGTGCGGTTCAATATTTACAAGGATTGTTTTCCACTACCTGAGAATGTTTTCAAGGAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGCCGAGCTCACTGTTAAACAGGTGGATGTGTCAGGTTTCTTCTGCTAGCTTGGGTTTTCATTAGCACTCTTGATTCTCTTTTTCCTGTGGTGACATTCTAGGATTTCATTTTTTCAGGTTAGGAAGCTCTCAGATCTTTTCCGACCAGTTGCACTCCATTCGAGTGCTGCTCCTGTCTTGTCCCATGTGGAGGTACCAATTAGGGATAGAAATGTTTATGGGAAAGCTAAAGACATTCGGATTAGGAACTCTAAGTCCAAGGATGATGCCAGGAAAAAATACCATTTGTCATCTCATGGAAGGGATCGACAGAGAGAAGAGGCACCTAGACGTAGAGAGGAGGTTCCTCGTGATTTATACCTAAGCGAAAGGGACTATCGAACATATGGGCTCCGGGCAGAGAGAAGAAATTTAGACCCTGTATCTCGATCTTCTTTAGAAACATACCGCAGGGATCATGATAGGGACTATCCACTGAAACATCTAGAGCCTAGATACAGGGATGATGTCTCGACACACGCACAGAGAGAAATAGTCCATTCGGATCAAGTATACTTTAATGGGAAAGATTATCCAGTTTACAGTATTGATTCTAGACATCAAATATCACCTCGAAGACCAATATCTGCTAGTGGTACAGAACACAATGCTTATGATTCAATTTACAGTCGTTATGGCCTTTCTTCTATTGATCCATATCTGCTTTCATCAAGGAGGGAGGAAGCAGCCCCTCCAACTTATTCAAGAAGTTATTTAGCTGATACTGAACCCATGAGACATGCTGCTGGTTCTCTATCGCATTACAATCAAGTGCACTACAAAGATGTGGAAAAAGATACAATGCCGGTTTCATCGCTGTACTCATTCGCTGGTCCATCGTTCTCTTATCGCTAACTTTGATTTCCATTTTTTGTCCAGAATTCCATATAGCAATAGAACTTCGACTGCGTATGAAATTTTGAGTCTCAGACCCTCATTGTGCAGTTGGAATTCCATCTTACCTTTTTAGTAGTGATAATGTGACGATGGGGGAAGTAGGGTTTTGGCTGTTGTATTGGATTTTGTTGGCGAGTGCTTAATTACTTGCAAGATTGCTCTATCAAACTGGGGTTCTTAATCATTGCTGCACTTGTTTTTGACGCGATGTAGAATTTGAGGATGATTGCAAATTGTTGATGAAAAATCTCGAGTAGGTCAAGAATAATGTGAATATGGAGGACGTTATTTATGTAGCACAATTGTTTTTAACGATTTCACTTTTTGTAACTCTAGGTAGTTTTGTAAAGTTAGGCAGGTTTGCATGCTTCTTATACAGTACATTGTTTAAATTATATTTTTATCTTATTTTGATCTTTAAACTTTGAACAAATTTTGTTTAGGATGTTGGATTTAGTCCTTGATCTTTTAAAGAAGATTGCGTGATGATGGGCACTGGTTGCAATTTGAGAATGCAGTCTCCATTACGAGTTTACTCACATTTTTTAGATTAAGAATAATTAGAACCGTGAACAGGGACTTTCTAGTCAATGACTATCCTTTTCATGTTCAATGAAAAACACAAGAACGTTTATTTGAATGGTTTTTGGTTCGAGTTTGAGTTCAATTTGGTAGATTGAGATGGGCACAGGACACTATGTTTCAATATCAGTTAGATTATTGTAATCTTGGAAAGCAAATAGTCTCTAGTGTTAAACTACATAGATCTAACTAAAATAAACCATGCCTGCTTATTTGGAATCATGTCGACCACATAAATGCCCATTCGATCTAAAATAGTGGCCACGCCAATAATTTTTGAAAAAAACATTTTGGTAGATATCAAAATATAACAAAATTTAAATTTAGGGAATGGAATGAGATTTAAACCTTGTTTATTATGGTATTTTGAAAATATTTTAGGATGTGATTGATCTATCAAATTTGGAAATAATAGTGGAAGTAGGAATTTGTGTTGAAACTGGTATTGAGCTTTTGAACGCCTCGAACAGAAACACTTGTAACTTGGTCGCTTGTTGAATTAATCACCTGGATGATAGTTCTCTAGAAGATCGATACATATATAGAATGCCTAGATTGGTCACCTAGA ATGTGCAGTGCAAAAACGAAGCCAGATTGTTTTCACTACAACGTAATGGGTGTTTCTGCTGGCAAAATGGATGTTGTCTTGGCAATTAAGCCTGGCTTGAAGCTCTTTCTCTACGATTTTGATCTCAAGCTTCTGTATGGGATTTATAAAGCATCCTCTACCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTGCGGTTCAATATTTACAAGGATTGTTTTCCACTACCTGAGAATGTTTTCAAGGAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGCCGAGCTCACTGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTCCGACCAGTTGCACTCCATTCGAGTGCTGCTCCTGTCTTGTCCCATGTGGAGGTACCAATTAGGGATAGAAATGTTTATGGGAAAGCTAAAGACATTCGGATTAGGAACTCTAAGTCCAAGGATGATGCCAGGAAAAAATACCATTTGTCATCTCATGGAAGGGATCGACAGAGAGAAGAGGCACCTAGACGTAGAGAGGAGGTTCCTCGTGATTTATACCTAAGCGAAAGGGACTATCGAACATATGGGCTCCGGGCAGAGAGAAGAAATTTAGACCCTGTATCTCGATCTTCTTTAGAAACATACCGCAGGGATCATGATAGGGACTATCCACTGAAACATCTAGAGCCTAGATACAGGGATGATGTCTCGACACACGCACAGAGAGAAATAGTCCATTCGGATCAAGTATACTTTAATGGGAAAGATTATCCAGTTTACAGTATTGATTCTAGACATCAAATATCACCTCGAAGACCAATATCTGCTAGTGGTACAGAACACAATGCTTATGATTCAATTTACAGTCGTTATGGCCTTTCTTCTATTGATCCATATCTGCTTTCATCAAGGAGGGAGGAAGCAGCCCCTCCAACTTATTCAAGAAGTTATTTAGCTGATACTGAACCCATGAGACATGCTGCTGGTTCTCTATCGCATTACAATCAAGTGCACTACAAAGATGTGGAAAAAGATACAATGCCGGTTTCATCGCTGTACTCATTCGCTGGTCCATCGTTCTCTTATCGCTAA ATGTGCAGTGCAAAAACGAAGCCAGATTGTTTTCACTACAACGTAATGGGTGTTTCTGCTGGCAAAATGGATGTTGTCTTGGCAATTAAGCCTGGCTTGAAGCTCTTTCTCTACGATTTTGATCTCAAGCTTCTGTATGGGATTTATAAAGCATCCTCTACCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTGCGGTTCAATATTTACAAGGATTGTTTTCCACTACCTGAGAATGTTTTCAAGGAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGCCGAGCTCACTGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTCCGACCAGTTGCACTCCATTCGAGTGCTGCTCCTGTCTTGTCCCATGTGGAGGTACCAATTAGGGATAGAAATGTTTATGGGAAAGCTAAAGACATTCGGATTAGGAACTCTAAGTCCAAGGATGATGCCAGGAAAAAATACCATTTGTCATCTCATGGAAGGGATCGACAGAGAGAAGAGGCACCTAGACGTAGAGAGGAGGTTCCTCGTGATTTATACCTAAGCGAAAGGGACTATCGAACATATGGGCTCCGGGCAGAGAGAAGAAATTTAGACCCTGTATCTCGATCTTCTTTAGAAACATACCGCAGGGATCATGATAGGGACTATCCACTGAAACATCTAGAGCCTAGATACAGGGATGATGTCTCGACACACGCACAGAGAGAAATAGTCCATTCGGATCAAGTATACTTTAATGGGAAAGATTATCCAGTTTACAGTATTGATTCTAGACATCAAATATCACCTCGAAGACCAATATCTGCTAGTGGTACAGAACACAATGCTTATGATTCAATTTACAGTCGTTATGGCCTTTCTTCTATTGATCCATATCTGCTTTCATCAAGGAGGGAGGAAGCAGCCCCTCCAACTTATTCAAGAAGTTATTTAGCTGATACTGAACCCATGAGACATGCTGCTGGTTCTCTATCGCATTACAATCAAGTGCACTACAAAGATGTGGAAAAAGATACAATGCCGGTTTCATCGCTGTACTCATTCGCTGGTCCATCGTTCTCTTATCGCTAA MCSAKTKPDCFHYNVMGVSAGKMDVVLAIKPGLKLFLYDFDLKLLYGIYKASSTGGMKLEPKAFNGAFPAQVRFNIYKDCFPLPENVFKEAIQENYYEKHKFKAELTVKQVRKLSDLFRPVALHSSAAPVLSHVEVPIRDRNVYGKAKDIRIRNSKSKDDARKKYHLSSHGRDRQREEAPRRREEVPRDLYLSERDYRTYGLRAERRNLDPVSRSSLETYRRDHDRDYPLKHLEPRYRDDVSTHAQREIVHSDQVYFNGKDYPVYSIDSRHQISPRRPISASGTEHNAYDSIYSRYGLSSIDPYLLSSRREEAAPPTYSRSYLADTEPMRHAAGSLSHYNQVHYKDVEKDTMPVSSLYSFAGPSFSYR* Homology
BLAST of CsaV3_2G004580 vs. NCBI nr
Match: XP_031736679.1 (uncharacterized protein LOC116402060 [Cucumis sativus]) HSP 1 Score: 741.5 bits (1913), Expect = 3.5e-210 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. NCBI nr
Match: KAE8651571.1 (hypothetical protein Csa_019348 [Cucumis sativus]) HSP 1 Score: 741.5 bits (1913), Expect = 3.5e-210 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. NCBI nr
Match: KAE8651574.1 (hypothetical protein Csa_023448 [Cucumis sativus]) HSP 1 Score: 741.5 bits (1913), Expect = 3.5e-210 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. NCBI nr
Match: XP_016901807.1 (PREDICTED: uncharacterized protein LOC103499546 [Cucumis melo] >XP_016901809.1 PREDICTED: uncharacterized protein LOC103499546 [Cucumis melo]) HSP 1 Score: 697.6 bits (1799), Expect = 5.8e-197 Identity = 350/369 (94.85%), Postives = 358/369 (97.02%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. NCBI nr
Match: KAA0063648.1 (uncharacterized protein E6C27_scaffold329G001620 [Cucumis melo var. makuwa] >TYK18377.1 uncharacterized protein E5676_scaffold456G001000 [Cucumis melo var. makuwa]) HSP 1 Score: 697.6 bits (1799), Expect = 5.8e-197 Identity = 350/369 (94.85%), Postives = 358/369 (97.02%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 9.9e-14 Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.4e-13 Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.4e-12 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.2e-11 Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy TrEMBL
Match: A0A1S4E0R4 (uncharacterized protein LOC103499546 OS=Cucumis melo OX=3656 GN=LOC103499546 PE=4 SV=1) HSP 1 Score: 697.6 bits (1799), Expect = 2.8e-197 Identity = 350/369 (94.85%), Postives = 358/369 (97.02%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy TrEMBL
Match: A0A5A7V7U7 (DCD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001000 PE=4 SV=1) HSP 1 Score: 697.6 bits (1799), Expect = 2.8e-197 Identity = 350/369 (94.85%), Postives = 358/369 (97.02%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy TrEMBL
Match: A0A6J1D9F1 (uncharacterized protein LOC111018835 OS=Momordica charantia OX=3673 GN=LOC111018835 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164 Identity = 295/369 (79.95%), Postives = 324/369 (87.80%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy TrEMBL
Match: A0A6J1K9Y2 (uncharacterized protein LOC111493592 OS=Cucurbita maxima OX=3661 GN=LOC111493592 PE=4 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 2.8e-160 Identity = 290/378 (76.72%), Postives = 320/378 (84.66%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. ExPASy TrEMBL
Match: A0A6J1G3C2 (uncharacterized protein LOC111450407 OS=Cucurbita moschata OX=3662 GN=LOC111450407 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 9.2e-156 Identity = 290/394 (73.60%), Postives = 315/394 (79.95%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. TAIR 10
Match: AT2G32910.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 216.5 bits (550), Expect = 3.7e-56 Identity = 147/342 (42.98%), Postives = 187/342 (54.68%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. TAIR 10
Match: AT5G61910.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 136.0 bits (341), Expect = 6.3e-32 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. TAIR 10
Match: AT5G61910.2 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 136.0 bits (341), Expect = 6.3e-32 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. TAIR 10
Match: AT5G61910.3 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 136.0 bits (341), Expect = 6.3e-32 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of CsaV3_2G004580 vs. TAIR 10
Match: AT5G61910.4 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 136.0 bits (341), Expect = 6.3e-32 Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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