|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG mRNA sequence ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG Coding sequence (CDS) ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG Protein sequence MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLIPNCSN*
Homology
BLAST of CsaV3_2G004050 vs. NCBI nr
Match: KGN60799.1 (hypothetical protein Csa_019206 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query: 1 MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI
Sbjct: 1 MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
Query: 61 PNCSN 66
PNCSN
Sbjct: 61 PNCSN 65
BLAST of CsaV3_2G004050 vs. ExPASy TrEMBL
Match: A0A0A0LIC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010350 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.5e-28 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query: 1 MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI
Sbjct: 1 MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
Query: 61 PNCSN 66
PNCSN
Sbjct: 61 PNCSN 65
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN60799.1 | 1.7e-27 | 100.00 | hypothetical protein Csa_019206 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LIC3 | 8.5e-28 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010350 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
